Oncorhynchus keta (chum salmon): 118358854
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Entry
118358854 CDS
T09424
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin
KO
K09526
DnaJ homolog subfamily C member 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118358854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118358854
03110 Chaperones and folding catalysts [BR:
oke03110
]
118358854
04131 Membrane trafficking [BR:
oke04131
]
118358854
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118358854
Chaperones and folding catalysts [BR:
oke03110
]
Heat shock proteins
HSP40 / DNAJ
118358854
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
118358854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
118358854
NCBI-ProteinID:
XP_052337113
LinkDB
All DBs
Position
26:complement(4940929..5004070)
Genome browser
AA seq
974 aa
AA seq
DB search
MSLLGGYKKKTCSYDGYESLQLVDSSGNFNNGGGRGGGSVAATLGGPKAGPLREDDCSTM
DSSGPPSPDMDANYGGGLLDMVKGGAGKFFSNFKDNLKDTLKDTSTKVMHQVATYTKGEL
DIAYITSRIIVMSYPAEALQIGNQNHVEDIRSFLDSRHADHYTVFNLSQRNYRGAKFSNR
VSECNWPPRQAPSLHNLFAVCKNMHNWLKQNPKNVCVITCSDGRAPSGVLVCAMFCFCHL
FSNPVPAMQLLSAKRPGSGLWPSHRRYIGYVCSMVSEKPSLPHSKPLVVKAVTMSPVPCF
NKQRIGCRPFCEVLIGETKIFSTAQDYERMREHRVQDGKVVFPLGVNVQGDVVISVYHMR
NTIGGRLQAKVSNTQILQIQFHTGFIAPGTSVLKFTKPELDACDSPEKYPQLFHVLVDIE
VEGTDKQKDLTPPWEQFPNKDLIPNVLFSCHQEHQDALAIAEPSRSHSGSDSRPHGEDSE
PSDDEMLSLSSQQSNASGERHGGAQAGPRGPKRPEQPQALATAPPPPEEMDLLGLDGAAV
NPLPQTPAPHHQHHHGPPGGSVWSLPPAPAWEWARLGPVHPPENSPSLHLPLPLPSIRPI
WGGSDAQAPGADGFLPGSTSLLHAARSPSPTMQNTGKGRSSPVPPTTPVVTIQQPPNAMG
GWDWNKSAAPGGGFGMGSRSASTSPTGSVHSTPTHQVKPKTLDPFADIGNLGGSLGGGSG
FSSKPTTPTGTTPAFPPMGSPSRPPPSPQHGGGWQANTGFPSWQPGGGGGGGQAGWQPQP
QGQGGPPSQPKPSPSHSMPHTSPSNRPNYNISFSVMGGGAAPNAAGKPQPNMGTKPKVAT
ANFDDLLSGQGFAGAKKKEGPRTIAEMRKEEMAKEMDPEKLKILDWIEGKERNIRALLST
MHTVLWEGETRWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELND
AWSEFDSQGQKALY
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagcctactgggtggctataagaaaaagacctgcagttacgatggctatgaatcttta
cagttggtcgatagcagcggtaacttcaataacgggggagggagaggcggcggctcggta
gcagcaaccctaggcggaccgaaggcaggcccactgcgcgaggacgactgcagcaccatg
gacagctcaggtcctccatctccagatatggatgccaactatggcggagggctgctggat
atggtgaaaggcggagccggcaagttcttcagcaacttcaaggacaacctgaaggacaca
ctcaaagacacctccactaaagtcatgcaccaggtggccacgtacacaaaaggagagctg
gacattgcctacatcacatcacgaatcatagtgatgtcatatcctgcggaggcgttgcag
atcggcaaccagaaccatgtggaggacatccgctctttcttggactcacggcacgctgac
cactacaccgtcttcaacctgtcacagcgcaactatcgcggcgccaagttctccaaccgg
gtctcggagtgtaactggccgccccgccaggctcccagcctgcacaatctgtttgcggtg
tgtaagaacatgcacaactggctcaaacagaaccccaagaatgtgtgtgtcatcacctgc
tcggatgggcgtgctccctcgggtgtgctggtctgtgccatgttctgcttttgccacctc
ttcagcaacccagtgcccgccatgcagctactcagcgccaagagacccggctcaggcctc
tggccctcgcaccggaggtacataggctatgtgtgcagtatggtatcagagaagccctcc
ctgccccactcaaagcccctggtggtcaaggcggtcaccatgagtccagtaccctgcttc
aacaaacaacgcatcggctgcagacctttctgtgaggtcctcataggggagactaagatc
ttctctacggcacaggactatgagaggatgcgagagcacagggtccaggatgggaaggtg
gtcttccctctaggtgtgaatgtccagggtgatgtggtcatctctgtctatcatatgaga
aacaccataggaggacgactgcaggccaaggtgtccaacactcagatactccagatccag
ttccacacaggcttcatcgctccagggacaagcgtgttaaagtttacaaagccggagctg
gatgcgtgtgactctccagagaagtacccacaactgttccatgtgttggtggacattgag
gtggagggtacagacaagcagaaggacctgacccctccctgggaacagttccctaataaa
gacctgatccccaacgtactgttctcatgtcaccaagagcaccaggacgccctcgccatc
gcagagccaagccggtcccacagtggttcagacagtcgccctcacggggaggacagtgag
ccgtctgatgatgagatgctgtccctgtccagccagcagagcaacgctagcggagagcga
cacggaggggctcaggctggccccaggggccccaagagaccagagcaacctcaggccctc
gccactgctcctcctcccccagaagaaatggacctcctgggcctggatggggctgctgtg
aaccccctgccccaaaccccagccccccaccaccaacaccaccacggacctcctggggga
tctgtttggagcctccccccagcccccgcctgggagtgggcccgcctcggcccagtccac
cccccagaaaatagcccctccctccacctccccttgcccctccccagcattcgacccatt
tggggcgggtccgatgcccaagccccaggagctgatgggttccttccggggtccaccagc
ctcctgcatgcagctcgctctccgtcccccactatgcagaacactggcaagggacggagc
tccccagtcccgcccaccacccctgtggtcaccattcagcagcctcccaacgccatggga
ggatgggactggaacaagtctgcagctccaggagggggttttggtatgggcagtaggtca
gccagcaccagccctaccggatcagtccacagcacccccacacaccaggtcaaacccaag
accctggacccatttgctgatattggaaacctggggggcagtctgggaggaggctctggc
ttctccagtaagcctaccacccctacaggcaccacccctgccttcccacccatgggctcc
ccttcacggcctcctccctcgccccagcacggtgggggctggcaggctaacacaggcttc
ccctcgtggcagcccggtggtggcggtggtggagggcaggcagggtggcagccccaaccc
cagggtcagggtggcccaccctcccagcccaaacccagccccagccactccatgccgcac
acctccccctccaacagacccaactacaacatcagtttctctgtcatgggaggaggggct
gctcccaatgcagccgggaaaccacagcccaacatgggcaccaagcccaaagttgcaacg
gctaacttcgacgacctgctgtctggccaaggttttgctggagccaaaaagaaggaaggt
cccaggacaatagcagagatgaggaaggaggagatggctaaagagatggaccccgagaaa
ctcaagattctggactggatcgaggggaaggagcgtaacatccgggctctgctgtccacc
atgcacacggtgctgtgggagggggagacccgctggaagcctgtaggcatggctgacctg
gtgaccccagagcaggtcaagaaggtttaccgcaaagccgtgctggtggtccatccagac
aaggccacgggacagccctatgaacaatatgccaagatgatttttatggaactgaatgac
gcctggtcagaatttgacagccaaggacagaaagcactctactga
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