Oncorhynchus keta (chum salmon): 118358876
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Entry
118358876 CDS
T09424
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118358876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118358876
Spliceosome [BR:
oke03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118358876
Complex C
U4/U6.U5 tri-SnRNP related factors
118358876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Wap1
Motif
Other DBs
NCBI-GeneID:
118358876
NCBI-ProteinID:
XP_035592749
EnsemblRapid:
ENSOKEG00005040273
LinkDB
All DBs
Position
26:6820210..6824117
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AA seq
308 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSEEEDEEEEKTERVQTPEPHRRSYRDNDRPRRSPSPRYRRSSRSPRR
RSRSPKRRSPSPRRERHRSKSPRRHRSRERRHRSKSPGHHRSHRHRSHSKTPERSSKKSH
KKSRRGNV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggacggttaaagatgccaacagtatacatggaacaaatccacaatacttg
gtagagaaaattattcgtactcgaatctatgaatcaaaatactggaaagaagaatgcttt
ggactgacggctgagcttgtcgttgacaaagccatggcgctgaagtttgtcggtggagtt
tatggcggaaatatcaaacctacaccgttcctgtgtctcactctgaagatgctgcagatc
cagccagagaaagacatcattgtagaatttatcaaaaacgaggatttcaaatatgtccgc
ttgcttggcgccatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaacgactacagaaaaatcaagagtcagaaccgaaatggggagtttgag
ctgcaacacgtcgatgagtttattgatgaactgctacactctgagagaatgtgtgacata
atccttcccaggcttcagaaaaggcaggttcttgaggaggcggagctgttagacacgcgc
atcagtgccctggaagaagacctggatgaggtggagaccagcgaagaggaagatgaggaa
gaggagaagacagagagagttcagaccccagagccccacaggcggagttaccgagacaac
gatcggcctcgccgctcgccctctccacgctacagacgcagcagtcgttcacccagacgg
aggagcagatcacctaagagacgaagcccatcccccaggcgagaacgtcaccgcagcaaa
agcccccgacgtcaccgctcccgagagagacgtcaccgctcaaagtccccagggcatcac
agaagccacaggcatcgcagtcactccaaaaccccagagaggagttcaaaaaagagccac
aagaagagtcgaagaggaaatgtgtga
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