KEGG   Oncorhynchus keta (chum salmon): 118359052
Entry
118359052         CDS       T09424                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1-like
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oke01009]
    118359052
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oke04121]
    118359052
Enzymes [BR:oke01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118359052
Protein phosphatases and associated proteins [BR:oke01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118359052
Ubiquitin system [BR:oke04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118359052
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-RING_11 zf-rbx1 zf-Nse Prok-RING_4
Other DBs
NCBI-GeneID: 118359052
NCBI-ProteinID: XP_035593149
EnsemblRapid: ENSOKEG00005052881
LinkDB
Position
26:complement(19592431..19647969)
AA seq 866 aa
MDESVLLDLLECPVCLERLDATAKVLPCQHTFCRRCLQGILSSRAELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPVAGVCTNGTAGVRMQGNGPRDSGTPGAQPQRGQAK
STPVRGVPQLPCAKALYNYDGKEPGDLKFSKGDVIILRRQVDENWYHGEIGGVHGFFPTN
FVQIIKPLPQPPPQCKALYDFELKDKEADKDCLPFTKEDILTVIRRVDENWAEGMLGDKI
GIFPISYVEFNSAARQLIELDKPGDSSGDSGEGASSGPQSNGGPHRAGEKKNSKKRHSFT
SLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARISEISGGLSCSAPSQVHICTAGL
IVTPPPSSPVTTATVFTFPPETSYTSIPVDARPPPPPPPPQSSAVGAASSLAASQRPSPS
TSEQSGRQRPTVYVALFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFP
GNYMSPVSRTVSGSTQPKAPLALCTQAGRGVTVVSPSTPLGAIVPLLDFNKALPICPGPA
LSSPLPAGMVTAAHVTTGQAKVLMHMTSQMTVNQARNAVRTAACHSQDRPTAAVTPIQSQ
TSVAYLSVCQSQTCSASSNPAQGCVRAGVALGCAAASLTPPNVSAASLDGDALRQVAVLT
MPVAPGNGNSMSANSSLACRLDKDGKREKKGILKLLSSNKKKSRPSPPSSPTLEAEQAAT
GDVFQGAMGPDITPSPSSAGIVVGNHGRAVPCPVEPESTAASSSSCSSAPELTHRKSSPL
DGCAPIAPPPRQACSSLTSQQHDARPILCERYRVVVSYPPQSDAELELKEGDIVFVHRKR
EDGWFKGTLQRNGRTGLFPGSFVDGI
NT seq 2601 nt   +upstreamnt  +downstreamnt
atggatgaatcagtgctgttggacttgctggaatgcccagtgtgtttggagcggctggat
gccacagccaaggtcctcccttgccagcacaccttctgcaggcgctgccttcagggcatc
ctgagctcccgggcagagctgcgatgcccagagtgccgtacgctggtggagtgtgctgtg
gacgagctgcccagcaatatcctcctggttcggctgttggacggcatcaaacagagaccc
cgcagggcgggccctgtagctggagtctgcaccaacggcacagctggagtcaggatgcag
ggcaacgggcccagagactcaggcacaccgggagcacagccccagagaggccaggcaaag
agcaccccagtgaggggtgtaccccagctgccctgtgccaaggccctgtacaactacgat
ggcaaggaacctggggacctcaagttcagtaagggtgacgtcatcatcctgcgacgtcag
gtggatgagaattggtaccatggggagattggcggagtccacggtttcttccccaccaac
tttgtccagatcatcaagccactgccgcaacccccgccacagtgcaaggccctctatgac
tttgagctcaaagacaaggaggcagacaaggattgcctgccctttactaaggaggatatt
ctgactgtgattcgccgagtggatgaaaactgggcagagggaatgctgggggataaaata
ggaatcttccccatatcatatgtcgagtttaactctgcggcccgccagctgattgagtta
gacaagcctggggactccagtggggactctggcgagggggcctcgtcgggcccccagagt
aacgggggcccccaccgggccggggagaagaagaacagtaagaagcgccactcgttcacc
tcactcaccatgtcccacaagccctgtctggccccgcccccacagagacactccatggag
atcagtgggccggtcctcatcagctcctccaaccccacggcagccgcacgcatcagcgag
atcagcggaggactgtcctgcagcgcaccctcacaggtacacatctgcacagctggactc
atagtgactcctccccccagcagtcctgttactacggcaactgtcttcacgtttccccct
gagacgagctacacatccatccctgtggatgctcgccctcctcccccgccgcctccacca
caatcctcagcggtgggagcagcctcctcgttggctgccagtcagagaccctcccccagc
actagcgaacagagtgggcggcaaagacccacagtctacgtggccctgtttccctacacc
ccccgtaaggaggatgagttggagctgaggaagggagagatgttcctggtgctggagcgc
tgtcaagatggatggttcaaaggcacctccatgcacactggcaagataggagtgtttcct
ggcaattacatgagccccgtcagcaggacggtgtccggcagcacccaacccaaagcgccc
cttgctctgtgcacccaggctgggcgaggggtcaccgtcgtcagcccctccactcctctg
ggggccattgttccattgcttgacttcaacaaggccctccccatctgcccgggccccgcc
ctctccagccctttacccgcgggcatggtgactgctgctcacgtgacaacgggacaggcc
aaggtgctcatgcacatgacgtcccagatgactgttaaccaggcacgcaatgctgtcagg
acagctgcatgccacagtcaggaccggcccacggctgctgtgacgcccatccagtcacag
acatctgtagcctacctgtcagtgtgccaatcccagacctgctccgcctcctccaaccct
gcccagggctgtgtccgtgctggggtggcactgggatgtgctgctgcctccctcaccccg
ccaaacgtcagcgccgcgtccctggatggcgatgccctgcggcaagtggcagtcctcacc
atgcctgtcgcccctggcaacggcaactccatgtcagctaactcctccctcgcctgtcgg
ctggacaaggatggcaagagggaaaagaaaggtattctgaagctgttgtcgtctaacaag
aagaagtctcgcccctctcccccctcatcccccaccctggaggcagagcaggctgctacg
ggggatgtcttccagggggccatgggccccgacattaccccttctccctcctctgctggc
attgtcgtgggtaaccatggccgtgctgtcccctgccctgtggagcctgagtctactgcc
gcctcttcatcctcctgttcctcagccccggagttaacgcaccgtaagagtagccccctg
gacggatgtgcccccatcgccccgccacctcgccaggcatgctcctccctcacctcccag
cagcacgacgctcggccaatcctatgcgagaggtacagagtggtggtgtcctacccccct
cagagtgatgcagagctggagctcaaagagggagacatagtgtttgtccacaggaagagg
gaggacggctggttcaaaggaacactccagaggaacggcaggaccggactgttccctggc
agcttcgtagacggcatctga

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