Oncorhynchus keta (chum salmon): 118359104
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Entry
118359104 CDS
T09424
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00280
Valine, leucine and isoleucine degradation
oke01100
Metabolic pathways
Module
oke_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
118359104
Enzymes [BR:
oke01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
118359104
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATPgrasp_ST
BT_MCC_alpha
ATP-grasp_3
RimK
NQRA_N
RnfC_N
ATP-grasp_4
Leo1
Motif
Other DBs
NCBI-GeneID:
118359104
NCBI-ProteinID:
XP_035593241
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All DBs
Position
26:complement(22150804..22169898)
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AA seq
708 aa
AA seq
DB search
MFAVLKVQTLQGLRIFQQKCIWTKGSVRFASVGQGRIEKVLIANRGEIACRVMRTAKKMG
VRSVAVYSDADRDSMHVAMADEAYNIGPAASQQSYLSMEKVLEVAKRSGSHAVHPGYGFL
SENTEFAEACKQEGIIFIGPPSSAIRDMGIKSTSKYIMSAAGVPIIEGYHGDDQSDEKLQ
AEAVRIGYPVMIKAVRGGGGKGMRISHTAEDFHEQLESARREARKSFNDDVMLVEKFVED
PRHVEVQVFGDQHGNAVYLFERDCSVQRRHQKIIEEAPGPGISKEVRWKLGEAAVRAAKA
VNYVGAGTVEFIMDAQHNFYFMEMNTRLQVEHPVSEMITGTDLVEWQLRVAAGERLPLLQ
DEIELVGHSFEARIYAEDPNNDFLPGAGPLLHLSTPPADEYTRIETGVREGDEVSAHYDP
MIAKLVVWGEDRSAALKKLRYCLRQYNIVGLNTNIDFLLNLSGHPEFEAGNVTTSFIPQH
YEQLFPKPIPHSRATLCQVALGLLLRERASTQTFRDKSNDPFSPFACSNGRRVNILYSRN
MTLQLGETKVEVTVTYNSDGTYSMEIGGEVFQVSGEVETEGQTSFLHCSVNGVKSRPKLV
ILDNTVHLFSMEGSAEVSVPVPKFLAGVSTGAQGGAVAPMTGTIEKVLVKAGDTVQMGDA
LMVMNAMKMEHTIRAPKAGVIKKVFFKEGSQANRHAALVEFEEAAEEE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgtcctgaaagttcaaaccctacagggtctaagaatatttcaacagaaatgt
atatggaccaaaggatcagtacggtttgcctcagttgggcaaggcaggatagagaaagta
ctcattgccaacagaggagagattgcctgccgtgtgatgcgaacagcgaagaagatgggt
gtgcgctctgtggcagtatacagtgatgcagaccgagattccatgcatgtggccatggca
gatgaggcctataacattgggccagctgcatcccagcagagttacttgtcaatggagaaa
gtcttggaagttgccaagagatctggatcacatgctgtccatccgggatatggcttcctg
tcagagaacacagagtttgctgaggcgtgcaaacaggagggtatcattttcattggtcct
ccatcatctgccatcagagacatgggtatcaaaagtacatcaaaatacattatgtcagct
gcgggtgttcctatcatcgagggttaccacggagacgaccaatcagatgagaagctccaa
gctgaggctgttaggatcggctacccagtgatgataaaggctgtgcgtggcgggggtggt
aaaggaatgcgcatttcacacaccgctgaagatttccatgagcagcttgagtctgcgaga
cgagaggctcgcaagtccttcaacgatgacgtcatgctagtggagaaatttgtagaagac
cccagacatgtggaggtccaggtctttggggaccagcatggaaatgctgtctacctgttt
gagagggactgcagcgtgcagagaaggcaccagaagatcattgaggaagcgccagggcct
ggtataagcaaggaggtgaggtggaaactgggagaggcagcggtgagagcagccaaagcc
gtcaactatgtgggagcaggcactgtggagttcatcatggatgcacagcacaacttctac
ttcatggagatgaacacacgtctgcaggtggagcaccctgtgtctgagatgatcactgga
actgacctggtggagtggcagctcagggtggctgcaggtgagaggctgcccctcctgcag
gacgagatcgaactggtgggccattcatttgaggccaggatatacgctgaggaccccaac
aatgacttcctccctggggcaggacccctccttcatctgtctacacccccggcagacgaa
tacacacgcatcgagacgggcgtcagggaaggagatgaagtgtcagcccactatgacccc
atgatcgctaaactggtggtgtggggagaagaccgatctgctgctctgaagaagctcaga
tactgtctacgccagtacaacattgtaggactcaacaccaacattgacttcttgctgaat
ctgtctgggcatccagagtttgaggcggggaatgtgaccaccagcttcatcccccagcac
tatgagcagctgttccctaaacccatccctcactccagggccacactgtgtcaggttgcc
ctgggcctgctcctcagagagagggccagcactcagaccttcagagacaagtccaacgat
cccttctctccttttgcctgcagtaacggccggagggtgaacatcctatacagtaggaat
atgaccctccagctgggtgaaactaaagtggaagtaacggttacatacaattcagatggg
acttattctatggagattggaggggaagtgttccaggtgtcaggggaggtggagacagag
ggacagacatcattcctgcactgctctgtcaacggggtgaagtcccggcccaaactggtc
atccttgataacacagtacacctcttctctatggagggcagcgcagaggtgagcgttcca
gtgcccaagttcctggctggtgtgagcacaggagcacagggaggagctgtggcacccatg
accgggaccattgagaaggtgctggtgaaggcaggtgacactgtgcaaatgggagatgcc
ttgatggtgatgaatgccatgaaaatggagcacaccatccgagcacctaaagctggagtt
atcaagaaggtgtttttcaaagagggctcccaggccaaccgacacgcagccctggttgag
tttgaggaagctgctgaagaggaataa
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