Oncorhynchus keta (chum salmon): 118359186
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Entry
118359186 CDS
T09424
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118359186
Transcription factors [BR:
oke03000
]
Eukaryotic type
Other basic domains
RF-X
118359186
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
118359186
NCBI-ProteinID:
XP_035593419
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All DBs
Position
26:27289944..27354667
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AA seq
732 aa
AA seq
DB search
MQSSDGGSDSPSSVVLRTSTSTQAPVVQPVPASQQRVLVQATGSAQKGAQVQQLSVPRVQ
QVPQQVQQVQHVYPSQVQYVGEGGEAVYTNGTIRTAYSYNPEAQLYGQGSGGAYFDSQGG
GAQVTTVVSSAGGGPPHGMVGIAMDVGGSQVISGGGTYLIHGGGMDGGRHHASHSSRSSS
AMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQK
LDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDSQYMAMRQ
QPMHQKQRFKPLQKVDGMGDSLSGGSQHSASTPEQSVAAQSQHHQQYIDVSHVLPPFPTP
DLGTQPLPERINMNDVKKLQNLYRDHCEATLDVVMNLQFHYIEKLWQTFWYSTAPSSDVT
TTIPNSDEDMEGVIPREKLMALCKYEPVKLWMRSCDHILYQALVEILIPDVLRPVPSTLT
QAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTSLNHLAQAARAVLQNT
SQINQMLSDLNRVDFANVQEQASWVCQCDETVVQRLEQDFKVTLQQQSSLDQWAAWLDNV
VNQVLKPHEGSTSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
LVEHRVAQATGETPIAVMGEFSDLNSMLPMLMDKDPSFSDDMSDMGSDEGRGPNEPTVKR
ERIEINHSLQEI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagatggagggtccgattcgccgtccagtgtggtgctacgtacgtccacc
tccacccaggcccccgtggtgcagcccgtcccagcctcacaacagagggtgctggttcag
gccacaggttcggcccagaagggagcgcaggtgcagcagctgtcagtccctcgggtgcaa
caggtccctcagcaggttcagcaggtccagcatgtttacccctcccaggttcaatatgta
ggagaggggggagaggcagtttacactaatggaaccatccggacagcctactcctataac
cctgaggcccagctgtatgggcaaggtagtggaggagcctactttgactctcagggtggg
ggtgcccaggtcaccacggtggtctcctcggccggcggcgggccgccccacggtatggtg
ggcatcgccatggatgtgggcggtagtcaggtcatctccggtggcggcacctacctgatc
cacggcgggggcatggatgggggtcgccaccacgcctcacactcttcccgctcctcctct
gctatgcttgaaatggcgattgaaaacctccaaaagtctgaagggattgcaactcacaaa
agcagcctgctcaacagccatctgcagtggctgctggataactatgagacagcagagggg
gtgagcctgccccggagctccctctacaaccactacctgcgccattgtcaggagcagaaa
ctggaccctgtcaacgctgcctcctttgggaaactcatccgctccgtcttcatgggcctc
aggacccgccgcctcggcactaggggcaactccaagtaccactactatggcatcagactg
aagccagactcaccactcaacagactgcaagaggactctcagtacatggccatgagacag
caacccatgcaccagaaacagaggttcaagcccctccagaaggtggatggcatgggagac
agcctgtcaggaggctcccagcactcagccagcaccccagagcagtctgtggcagcccag
agccagcaccaccagcagtacattgatgtgtcacatgtcctgcccccgttccccacccct
gacctgggcacccagcccctccctgagcgtatcaacatgaatgacgtgaagaagctgcag
aacctgtacagggaccactgtgaggctactctggatgtggtgatgaacctccagttccac
tacattgagaagctgtggcagaccttctggtattcaacagcgccatctagtgacgtaacc
accaccatccccaacagtgatgaggacatggagggggtgatccccagggagaagctgatg
gctctgtgcaagtatgagcctgtcaagctgtggatgaggagctgtgaccatatcctgtac
caggccctggtggagatcctcatccctgacgtgctacgccctgtccccagtactctcact
caggccattcgcaactttgccaagagtctggagggttggctgaccacagccatgagcgac
tttcccaatgagattgtacgcaccaaggcagcggtggtgagtgcatttgctcagaccttg
cgtcggtacacctctctgaaccacctggcccaggcggcccgcgctgtgctgcagaacacc
tcccagatcaatcagatgctcagcgacctcaaccgcgtcgacttcgccaacgtacaggag
caggcgtcgtgggtatgccagtgtgacgagactgtggtccagcggctggagcaggacttc
aaggtgaccttgcagcagcagagctctctggaccagtgggccgcctggctggacaacgtg
gtcaaccaggtcctcaagccccacgagggcagcaccagcttccccagggctgcaagacag
ttcctgctgaagtggtccttctacagctccatggtgatcagggacctgaccctgcgtagt
gccgctagtttcggctccttccatctcatcaggctgctctacgacgagtacatgttctac
ctggtggagcaccgcgtcgcccaggcaactggagagacgcccatcgctgtcatgggagag
ttcagtgacctaaactcaatgttgcccatgctcatggataaagacccgtccttctcagac
gacatgagtgacatgggcagtgacgagggccgggggcccaacgaaccgaccgtgaaaagg
gagaggatcgaaatcaaccactcgctgcaggagatctga
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