Oncorhynchus keta (chum salmon): 118359194
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Entry
118359194 CDS
T09424
Name
(RefSeq) neurogenic locus notch homolog protein 2-like isoform X1
KO
K20994
Notch 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118359194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
EGF_Teneurin
JAG1-like_EGF2
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
118359194
NCBI-ProteinID:
XP_035593441
LinkDB
All DBs
Position
26:complement(27759457..27814663)
Genome browser
AA seq
2490 aa
AA seq
DB search
MGQLPVFSSGKVLVIVVCCVRLSLALQCLDAIKPCVNNATCATFTNGTGYCRCAAGFLGD
YCHHKDPCHPGYCLNGGNCSVAVSGIPGSPTCSCPLGYTGQHCQTPQNSTCYPNNPCANQ
GVCTLLSLDKYKCQCAHGWTGMRCNREDRCLSGPCANGGTCSSLSGGKFSCTCPQGYWGP
RCLNDTDECAASAPVCQNQGACVNTPGSYRCNCAPGFTGRQCETPYIPCSPSPCLNGGTC
RPTSETSYWCHCLPGFNGTNCENNIDDCPDHQCRNGGTCMDGVNTYNCQCPPEWTGQFCT
EDVDECRLQPNTCQNGGTCSNIQGSYTCVCVNGWSGLDCSENIDDCATAACTNGSTCIDR
VASFLCVCPYGKTGLLCHVNDACISSPCRDGAQCDTNPINGMFNCNCAPGYIGSTCNDDI
NECIIGFPSGPNPCEHGGSCVNTDGSFTCNCARGYGGPRCETDINECAPSPCQNDGTCLD
RIGDYSCICMEGFEGTHCEIDINECASSPCLNQGTCLDQVKRYVCQCPLGFSGEMCQIDI
DECSSTPCLNGAKCIDRPNGYECECAEGFSGPLCNENIDDCDPEPCHHGVCRDGIATFSC
DCDPGYTGSICNVQFMECHSNPCQNRGRCIDLVNKYQCNCLPGTSGVNCEFNVDDCASNP
CEYGECQDGINEYKCVCAPGYTGAKCDVDIHECNSSPCMSGGTCVDKVNGFICQCPPGTH
GPLCHSGTNHCAPQPCVHGDCVEQQSGYNCECDSGWVGQHCDQEKDECQSSPCQYSSTCV
DRLNGYSCQCRPGFTGVNCEFNMEECASSPCENHGTCVDGVNTYSCLCDPPYSGKHCEEE
LVPCASQPCERGGVCQPTPDYTFYTCRCPSGWQGPRCTEDVDECRKNPCQNRARCINSQG
SYVCKCRPGYSGLNCQTNIDDCSPHPCLNGGSCVDEVGGFSCDCRQGFDGERCEAEVDEC
ASQPCQNGAVCRDYVNSFVCVCRPGFDGILCEHNIPECTESSCLNNGTCVDDINTFSCRC
RPGFYGTFCEYEQNECDSQPCKHGGTCTDGLGSYRCTCPVGYNGQNCQNFVNLCSQPLCQ
NGGSCSQSETTWLCHCPVGWTGMYCDVPNMSCQDYAARNGIQMELVCKHSGRCVNVGNAH
QCQCLPGYTGSYCNEMVDECLSNPCRNGATCMDYQGTYECMCKAGYQGVNCEYDVDECHS
NPCHHGGTCINLINRFSCACPPGTNGVQCEVNVDDCAPKPGSWELRCLNGGQCVDGVGRY
TCSCPPGFAGEHCEGDVNECLSGPCQSPGSLDCVQLANDYQCRCRLGYTGRRCESMVDLC
QSKPCHNSGTCSMNMSSVHGYTCICQPGFTGFNCGEVEGYNCAKLRCQNGGHCQESQVGR
PHCRCQPGFSGPRCETVHSCQNRPCLNGGTCMKDPLYQYSCHCPAHFSGRHCENVIFDPS
TSTPASCPYVECEQHSGDKVCDPQCNSHECQWDGGDCSLHWRQPWVNCTAPVPCWELFRN
GRCDPECDNSGCLFDSFECQESAQSYCKYDKYCAAHYANKICDKGCNTEACGWDGLDCSG
DTPAVVADGTLVIVVLLQPEELMGDMRGFLRSLGTLLHTNLRVKMDDQQKPMLYPYYGLE
HDDANGGQPSTMKLRGKRELDKEVVGSKVYLEIDNRKCSERSMDCFSSTELAASFIAAEY
LKSELPYPVVSVNSDPTEPHKPPFLLYLAVGAAVIILLILVLGVLAAKRKRKHGIVWLPD
GFLAKKDDKRREPVGQDDFGMKNFKTQDGGIIDGGQRWMEEEAPPKKVRTEDKPLLPMGV
DGGVDRREWTLQHHKAADISLTPPQTDLEADCLDVNVKGPDGFTPLMLASLRNGGASDCG
LQAEEEEESGGDEPGPNAISDLITQGATVMAQTDRTGETALHLAARYARADAAKRLLDAG
ADANAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMV
EELVHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEQTPLFLAARE
GSFEAAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGG
GHSSLVCGGNGAGYMGMRPGPQGKKSRRGGAKVGGVGGATAKELKDMKAKRRKKPTGGEG
PAVGGASGNGTKAAGGLSESSVTMSPVDSLESPHSYIGDAAGASKTTNSPLLGSPSSRPL
LPPVSHMLGQQQSWVGLKHGYGGHMFNLLPQQMGSGHPSMSQHHGQGLLTPMNVTMSREQ
LPPIVTFQMMAPGGGQALLKQPQPGQVQSQGQNQGQPQSQQGPTHLHCTQGMLYQMPNMS
LQHSLSHSLPHPHSHGLAHGHGMVQDGQSRQQLPPYQAMQSPVDKYPTPPSQHSYATAGS
EGTTPGYPAHPPSEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNPHALPPLRH
THIPEQLQPQSQQTQQNPQQPQRGNMQVFA
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atgggccaattacccgttttctcttcgggcaaagtattagtcatcgtcgtctgctgtgtt
cgactttctttggctctccagtgtctggatgctattaagccatgtgtcaacaatgctaca
tgtgccaccttcaccaacgggacaggatactgcaggtgtgccgcaggtttcctgggtgat
tactgccatcacaaagacccgtgtcaccccggttactgtctgaatggggggaattgctct
gtggctgtgtcgggtatcccgggcagccctacctgctcctgtcccctgggctacactggg
cagcactgccagaccccccagaactccacctgctaccccaacaacccatgtgccaaccaa
ggagtctgcaccctgctctccctcgacaagtacaagtgccagtgtgcccacggatggaca
ggcatgcgctgtaatcgtgaggacagatgtctgtcaggaccctgtgctaatggaggcacc
tgcagctctctgtctgggggcaagttcagctgtacctgtcctcaaggttactggggtcct
cgctgcctcaacgacactgacgagtgtgctgcttctgccccggtgtgtcagaaccaaggg
gcgtgtgtcaacacccccggctcctacaggtgtaactgcgcccccgggttcactggccgc
caatgtgagaccccctacatcccttgctccccctcgccctgcctcaacgggggcacgtgt
cgcccaacctctgagaccagctactggtgccactgcctgccaggcttcaatggtactaac
tgtgagaacaacattgacgactgccccgaccatcaatgccgaaatggagggacctgcatg
gacggtgtcaatacttacaactgccaatgccccccagaatggactggtcagttctgtact
gaggatgtggatgagtgtcgcctgcagcccaacacatgtcagaacggggggacctgcagc
aacatccagggcagctacacctgtgtatgtgtcaacggctggagtggcctggactgctct
gagaacatagatgactgtgctacggctgcctgcaccaatggctccacttgtattgaccgt
gtggcatccttcctttgtgtctgtccctatggaaaaacaggtttgctctgccacgtgaac
gatgcctgcattagtagcccgtgccgggacggggcacagtgcgacaccaaccccatcaac
ggcatgttcaactgcaactgtgccccaggctacataggaagcacctgcaatgacgacatc
aatgagtgcatcataggcttcccctcaggtccaaatccctgtgagcatggaggatcgtgt
gtgaacacagatggctcgttcacatgtaactgtgcgagaggttatggtgggccgcgctgt
gagacagacatcaatgagtgtgcgcccagcccctgccagaatgacggcacctgtctggac
cgcataggagactacagctgcatctgtatggaaggatttgagggaacacactgtgagatt
gacatcaacgagtgtgccagttctccatgtctgaaccaagggacctgtctggatcaagtc
aaacgctacgtctgccagtgccctctaggattcagtggggagatgtgtcagatcgacatt
gacgagtgttccagcacaccatgtctcaacggggctaagtgtatcgaccgtcccaacggc
tacgagtgtgaatgtgctgaaggcttctcggggccgttgtgtaatgagaacatagatgac
tgtgacccagagccctgtcaccacggggtttgtcgtgacggcatcgcaaccttctcgtgt
gactgtgacccgggctacaccggctctatctgcaacgtccagttcatggagtgccacagc
aacccctgccagaaccgtggacgctgcatcgacctggtcaacaagtaccagtgcaactgt
ctgcctggcacctcgggggtgaactgtgagttcaatgttgacgactgtgccagtaacccc
tgtgaatacggagagtgccaggacgggatcaatgagtacaagtgtgtctgtgctccagga
tacacaggtgcaaaatgtgatgtggacatccatgagtgtaattccagcccgtgtatgagt
gggggtacgtgtgtggacaaggtaaatggcttcatctgccagtgtccccctggcacccac
ggccccttgtgccactctggcaccaaccactgtgccccccagccctgtgtacacggagac
tgtgtagagcagcagagcgggtacaactgtgagtgtgattctggctgggtggggcagcac
tgtgaccaggagaaggatgagtgccagtccagcccctgccagtacagcagcacctgtgtg
gacagactcaacggatactcttgccagtgtcgccccggattcacaggtgtgaactgcgag
ttcaacatggaggagtgtgcatcaagcccgtgtgagaaccatggtacctgtgtggatgga
gtcaacacctacagctgcctgtgtgatcctccatactccggaaaacactgtgaggaggag
ttggttccctgtgcgtctcaaccatgtgagaggggaggtgtgtgtcagccaaccccagac
tacaccttttacacctgtcgatgtcccagtggctggcaaggcccccgctgcactgaggat
gtggatgagtgcaggaagaacccatgtcagaacagggcccgttgcatcaacagccagggc
agctacgtgtgcaagtgtcgaccaggctacagcggtctcaactgccagaccaacatcgat
gactgctccccccacccgtgtctgaacggcggttcctgtgtggacgaagtgggagggttc
tcctgtgactgccggcaagggtttgatggtgagcggtgtgaggcagaagtggacgagtgt
gccagtcagccgtgtcagaatggagctgtgtgccgggactacgtcaacagctttgtctgt
gtgtgccggccaggtttcgatggaatcctctgtgaacacaacatcccagaatgcactgag
agttcctgtctgaataacgggacctgtgttgatgacatcaacaccttctcgtgtcgttgt
cgtcctggcttctacggcaccttctgtgagtatgagcagaatgagtgtgactctcagccc
tgcaagcacggaggaacctgcactgacggcctgggctcctaccgctgcacctgccccgtg
ggctacaatggacagaactgccagaactttgtgaacctgtgtagccagccactgtgccaa
aatggagggtcttgttcccagtcagagaccacctggttgtgtcactgtcctgtggggtgg
actggcatgtactgtgatgtccccaacatgtcctgtcaggactatgctgctcggaacggt
atccaaatggagttagtgtgcaagcactcgggtcgctgtgtgaacgtgggtaatgcccac
cagtgtcagtgcttgcctggttacacgggcagctactgtaacgagatggtggatgagtgc
ctttccaacccctgccgcaacggggccacctgcatggactaccagggcacatatgagtgt
atgtgcaaggctggctaccagggggtgaactgtgaatatgatgtggatgagtgtcactct
aatccttgtcaccatggaggaacctgcatcaacctcataaaccgcttttcctgcgcctgc
ccacctggcactaatggtgttcagtgtgaggtgaatgtggacgactgtgctcccaagcct
ggctcctgggagcttcgctgtctgaatgggggccagtgtgtggacggggtgggacgctac
acctgctcctgcccccctggcttcgctggggaacactgtgagggggacgtcaacgagtgt
ctctctggtccctgccagtctcctggcagcctggactgtgtacagctggccaatgactac
cagtgccgctgtcgcttgggctacacaggacgccgctgtgagtccatggtggacctgtgc
cagtcgaagccgtgccataacagtggcacctgctccatgaacatgagctcagtgcatgga
tacacatgcatctgtcaaccaggcttcactggcttcaactgtggagaggtggagggctac
aactgtgccaagctgcgttgccagaacggcgggcactgccaggagtctcaggttggtcgt
ccgcactgccgttgccagccaggcttcagtgggccccgctgcgagaccgtccacagctgc
cagaaccggccctgtctgaacggaggcacctgtatgaaggacccactctaccagtacagc
tgtcactgcccagcccacttctcaggcaggcactgtgagaatgtcatcttcgatccgtct
accagcacccccgcctcctgcccctacgtagagtgtgagcagcattctggggataaggtg
tgtgacccgcagtgcaacagccatgagtgccaatgggacggaggggactgttctctacat
tggcgccagccatgggtcaactgcaccgccccggtgccctgctgggagctgttccgcaac
ggccgatgtgaccccgagtgtgacaactctggctgcctcttcgacagcttcgagtgtcag
gagagcgcacagtcttactgcaagtatgataagtactgtgcggctcactatgccaacaag
atctgtgataagggctgtaacacggaggcatgtggctgggacggcctggactgctctgga
gacacccctgctgtggtggctgacggaacgctggtgatcgtagtgttactgcagcctgag
gagctaatgggagacatgagaggctttctgcgctccctgggaaccctgctgcacaccaac
ctccgtgtcaagatggacgaccagcagaaacctatgttgtatccgtactacggcctcgag
cacgacgatgccaatggaggacagccttctaccatgaagcttagaggcaaacgggagcta
gacaaggaggttgtcgggtctaaggtgtacctggagatcgataaccgtaagtgttctgag
cgctccatggactgcttctccagcacagagctggctgcatccttcatcgctgctgagtac
ttgaaatctgagctgccctaccctgtggtctctgtcaacagtgaccctacggaaccccat
aagccccccttcctgctctacctggctgtgggagcagccgtcatcatcctgctcatcttg
gtgctgggtgtgctggccgccaagaggaaacgcaaacacggcatcgtctggctccccgat
ggcttcctggccaagaaggatgacaagaggcgagaacccgtgggccaggacgacttcggc
atgaagaacttcaagacccaggatggagggataatagatggaggccagaggtggatggaa
gaggaggctccgccaaagaaagtaaggactgaggacaagcccctgctgcccatgggtgtg
gatggaggagtggacagacgggagtggaccctgcagcaccacaaggctgctgacatctct
ctcactccaccacagactgatctggaggcagactgcctggatgtcaatgtcaaaggacca
gatggtttcacccccctaatgctggcctctctacgaaacggaggggcatctgattgcggc
ctgcaggcggaggaggaggaagagagcgggggagatgagccgggacccaacgccatctca
gacctcatcacccagggtgcaacagtcatggcccagacagaccgcaccggggagacggca
ctgcacctggctgctcgctacgcccgggccgacgccgccaagaggctgctggacgctggg
gcagacgccaacgctcacgacaacatgggtcgcacccctctccacgctgctgtggcagcc
gatgcccagggagtgttccagatcctgatccgtaaccgggccactgagttggatgcaagg
atgaatgatggcaccacacctctgatcctggctgccaggctggctgtggaaggcatggtg
gaggaactggtacattgccacgctgacatcaacgctgtcgacgaccacggtaaatctgct
ctgcactgggcagctgctgtgaacaatgtggaggccactctggtgctgctgaagaatgga
gccaacagagacatgcaggacaacaaggagcagaccccattgttcctggcagccagagag
ggtagttttgaggcagcccaggttctgctggaccactactctaatagggacatcacagac
cacctggaccggctgccccgcgacaccgcacaggagcgcatgcaccatgacatcgtacgt
ctgcttgaccagtacaacctggtccacagccctcacaatggccccaaccacatgggcggg
ggacactcttccttggtctgtggaggcaatggcgctggctacatgggcatgcgccccgga
ccccagggcaagaagagcaggcgcggcggggcaaaggttggaggggtgggtggggctaca
gcaaaagagctgaaagacatgaaggccaagcggagaaagaagccaacgggaggagaaggg
cctgcagtgggaggagccagtggcaacggcactaaagctgcaggagggctgtcggagagc
tcagtcaccatgtcccctgtcgactccctggagtctccacactcatacataggagatgct
gccggggcctccaaaacgaccaactctcctctcctgggcagcccctcctccaggcccctg
ctgcccccagtcagccacatgctgggccagcagcagagttgggtgggcctgaagcatggc
tatggtggccacatgttcaacctcctcccccagcagatgggcagtggccaccctagcatg
tcccagcaccacggccaaggcctgctcacccctatgaatgtcaccatgagccgcgagcag
ctgcctcccattgttaccttccagatgatggcgccggggggcgggcaggccctgctgaag
cagccccagcctgggcaggtgcagtcccagggccaaaaccagggccagccccaatctcag
cagggccctactcacctccactgcacccagggcatgttgtaccagatgcccaacatgagc
ctccagcacagcctgtctcacagcctccctcacccccactcccatggcctggcccacggc
cacggcatggtgcaggatggccagtcccgccaacagctccctccctatcaggctatgcag
agccccgtggataagtacccaacccctccttctcagcacagctacgctacggctggctcg
gagggcaccaccccagggtatccggctcacccgcccagcgagcacccttacctcaccccc
tcccctgagtcccctgacccctggtcctcctcctccccccactccaactcagactggtct
gacgtcaccaccagccccacccccctggggaacccccatgcactgccgcctctccgccac
acacacattccggagcagctgcagccgcagtcccagcagacacaacagaacccccagcag
cctcagcgtggcaacatgcaagtgtttgcatag
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integrated database retrieval system
