Oncorhynchus keta (chum salmon): 118359235
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Entry
118359235 CDS
T09424
Name
(RefSeq) methyl-CpG-binding domain protein 3-like isoform X1
KO
K11591
methyl-CpG-binding domain protein 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118359235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118359235
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
118359235
Chromatin remodeling factors
NuRD complex
118359235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
DUF7028
Clr2_transil
Pardaxin
Motif
Other DBs
NCBI-GeneID:
118359235
NCBI-ProteinID:
XP_035593527
LinkDB
All DBs
Position
26:30183684..30198776
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AA seq
271 aa
AA seq
DB search
MEKKRWDCSALPKGWQIEEVTRKSGLSAGKSDVYYYSPTGKKFRSKPQLARYLGNQMDLS
SFDFRTGKMLMSKLNKNRQRLRYDNNNQTKGKPDLNTSLPVRQTASIFKQPVTKVTNHPS
NKVKTDPQKAVDQPKQLFWEKKLGGLNAFDIAEELVKTMDLPKGLQGVGPGCTDKTLLSA
IASALHTSAAPITGQLSAAVEKNPGVWLNTTQPLCKAFIVTDEDIRKQEELVYSVRKKLE
EALMADMLAHVQEAASEGDSLNEDNDDMETV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaacggtgggattgctcggctctccccaagggctggcaaattgaagaagtg
accagaaagtcgggtttgtctgcggggaaaagcgatgtctattattatagtccaaccggg
aagaagtttcggagcaagcctcagctggctcgttaccttggcaaccagatggacctcagc
tccttcgacttccgcacggggaagatgctcatgagtaaactgaacaagaacagacagaga
ctccgctatgacaacaacaatcagaccaagggcaagccagacctgaacacatcacttccc
gtcagacagactgcttccatctttaagcagcctgtcaccaaggttaccaaccaccccagc
aacaaagtcaagactgatccacagaaagctgtggaccagccaaaacagcttttctgggag
aagaagcttggtggtctcaatgcatttgacatcgcagaggagctagtgaagacaatggac
ctgcctaaaggtctgcaaggagttggacctggatgtacagacaagactctactgtcagcg
atagccagcgccctgcacactagtgcagcccccatcaccggtcagctgtctgcagccgtg
gagaagaacccaggggtgtggctcaacacgactcagcccctctgcaaggctttcatagtc
actgacgaggacatcaggaagcaggaagagctggtgtacagtgtgaggaagaagctggag
gaggctctaatggcggacatgttggctcatgtgcaggaagcagccagtgagggcgactca
ctcaatgaagacaatgatgacatggagactgtatag
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