Oncorhynchus keta (chum salmon): 118359249
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Entry
118359249 CDS
T09424
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oke03029
]
118359249
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118359249
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
118359249
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
FTA4
Motif
Other DBs
NCBI-GeneID:
118359249
NCBI-ProteinID:
XP_035593560
LinkDB
All DBs
Position
26:31129516..31168762
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AA seq
1340 aa
AA seq
DB search
MSLLRLCALPKCLSGLILLERSVRRVSNAGHCHYFLTLRNNVGRRISDPPWTSQRRHFSA
LIPKKEDGKKRVWEQSRLLDVLEARIQQLQSDIVLDVQHAKVQFVNATKSGRGASSGKSH
KNVCGGRTELPKVGQTISKGGGQTGKGGGKDASASKSRWMEKLIQEKTTKTKKLNLKLGI
EDKPVKSRKGKLMLPGTAQKNILTKAGKKTALTSRKSKTLKNQEPTAIQADTIAGPPVAA
ATVPIRKAKGKGKASKEPAPEFSEARDQELAELERKTEAKAQELAEVEKLERKLNQWAMS
ASPELVQDNSVARMYEGVQLSVHCYLEACVFCGDIDRAQRLLLTHHRMISRRNLLNIGLY
NVMMRVWAKKGSLNQIGRMFILVEEAGLKPNLTSYCAALECMGRTPNCSPKVINRVLRQM
KEDGLCVEELFRLCVFRQDERDMVLRAIHTVEPDFQPSINTVLHTCSSPLVKDFYTERAD
AKYPKLAFSLEELRERFSRQLSMEQASTITIHSVEAMKPVTPHMAKMRTLLAEQRMVWHK
ALFGALRESNMILASITPKAVRLSLYPYLCLMDQKDYVDIMIQSLSNLPPSGESLHILAK
ELGNRVHNKFCIRMKSHNQMVDKLSHIYNEYAELLAKDSKDFDVLPRERWWKLEAEHSSG
PSLLGDNTQWPHTVVVELGTYLVDLMVKHMKVNSDILNPANDRKFIPVLYHMYTFRSNKQ
VGFIKPHPILTQMQQDAMETTLTFDSYVMPMLCPPVPWTSAKFGAYLLTPTKMMRTVVGA
NQHEILLEKCQDADLHAVHDSLNQLGNAAWRINQPLLDIIISIFNDKGNEKLDIPPPNSE
APKILRYSQQDLATYSSAEKAHLKRELVKAKKKCSEMHSLRMDALYKLSIANHMRDEVFW
FPHNMDFRGRTYPCPPYFNHLGSDVTRAILVFAEGKPLGPGGLKWLKIHLVNLTGLKKRS
SLAGRLEYANTIMDDILDSADNPLNGKKWWQNADEPWQALACCMEIANAVRSPDPTHFIS
HFPVHQDGSCNGLQHYAALGRDVIGATSVNLIPCEVPQDVYSGVAQQVEEFRARDSEKGL
KIAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEVDDFPKEYVWDASHYLVQQ
VFSSLKEMFTGTREIQDWLTESARLIAKSGNTVEWVTPLGLPIIQPYHRTRTQMLKGTIQ
DLSLQITHDSKQKPDTVKQKNAFPPNFIHSLDSTHMMLTALYCYSAGLTFVSVHDCFWTH
ALTVDTMNKVCREQFVALHSQPILQELSNFLLQKYCSGLSSEVKNNKFMEYRRMLLLLAK
VPQTGDFDLQQVKESTYFFS
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctattgagactgtgtgccttaccgaagtgtctgagtggtctaatattgttggaa
agaagtgttcgtcgtgtgtcaaatgctggccattgccactactttcttacactccggaat
aacgttggaagacgaatatcagatccaccatggacatcacaacgaagacatttctcagct
ctgatcccaaagaaagaggatgggaaaaaacgagtatgggaacaatctcggctattagat
gtacttgaggccagaatccagcaactccaatctgacattgttttagatgtccaacatgca
aaggtacaatttgtcaatgctaccaagtcggggagaggggcttcttcagggaagagtcac
aaaaatgtttgtggggggaggactgagttgcccaaggtgggacagactattagtaaggga
gggggacagactggtaagggagggggcaaagatgcttcagcctccaaatcccgctggatg
gagaaactgattcaggagaagacgactaaaacaaagaaactgaacctgaagctaggcata
gaagataaacctgtgaaaagcagaaaaggaaaactgatgctgccaggtaccgcacaaaaa
aacatattgacaaaagctgggaaaaagactgcattgacctctagaaagagcaagactctg
aaaaaccaagagccaactgctatccaagccgacactattgcaggtcccccggttgctgct
gcaactgtgcctattagaaaagccaaaggaaaggggaaagcctcaaaggagccggctcct
gagttttctgaggccagggaccaggagctggctgagctggagaggaagacggaggccaag
gcccaggagctagctgaggtggagaagttggagaggaagcttaaccagtgggctatgtct
gccagcccggagctcgtgcaggataacagcgtagctaggatgtacgagggcgtccagctt
agtgtgcattgctacctggaggcctgtgtgttctgtggcgacattgaccgagcccagcgc
ctcctgctcactcaccaccgcatgatcagccgacgcaacctgctcaacataggactctac
aacgtcatgatgagggtctgggccaagaagggctctttgaaccagattggacgtatgttc
attctggtagaagaggcaggtctgaagcctaacctcacctcctactgtgctgcactggag
tgcatgggcagaacccctaactgttctccaaaggtcatcaacagggtcctgcgtcagatg
aaagaggatggcctgtgtgtggaagagctgtttagactctgtgtgttcaggcaggatgag
agggacatggtgctgagggccatccacaccgtggaaccagactttcaacccagcatcaac
actgtcctgcacacttgctcctcacctctggtcaaagacttctacacagagagggcagat
gctaagtaccccaagttggccttcagcctggaggagctgcgggagaggttcagccgtcag
ctgagcatggaacaggccagcaccatcaccattcactctgtggaggccatgaagcctgtt
accccacacatggccaagatgaggactctgctggcggagcagcggatggtttggcacaaa
gccctgtttggggccctgagggagagcaatatgatcctggccagcatcaccccgaaggcc
gtcagactcagcctctacccctacctctgtctgatggaccaaaaggactatgtagacatc
atgatccagagtctgtctaacttgccacccagtggggagtctctccacatcctggccaag
gagctgggaaaccgggtccacaacaagttctgcatccgcatgaagagccacaaccagatg
gtggacaagctcagccatatctacaatgaatatgctgagctactagccaaagactctaag
gattttgacgtattgcctagggaacgatggtggaagctggaggcggagcatagctctggt
ccctccctgctgggggacaacacccaatggccccacacggtggtggtggagctgggcacc
tacctggtggacctcatggtcaagcacatgaaggtgaacagcgacatcctcaaccctgcc
aatgacaggaagttcatccctgtcctctaccacatgtacaccttccgcagtaacaaacag
gtcggcttcatcaagccgcaccccatcctgacacagatgcagcaggacgccatggagacc
acgctgacctttgactcctacgtgatgcccatgctgtgcccgcccgtgccctggacctcg
gccaagttcggcgcctacctcctcacccccaccaagatgatgcgcacggtggttggcgcc
aaccagcatgagatcctgctggagaagtgccaggacgctgacctgcatgccgtgcacgac
tccctcaaccagctgggcaacgcggcctggaggatcaaccagcccctgctagacatcatc
atctccatcttcaacgataagggcaatgagaagctggacatcccgccgcccaactccgag
gcccccaagatcctccgctacagccagcaggacttggccacctactcctcagccgagaag
gcccacctgaagagggagctggtcaaggcgaagaagaagtgcagtgagatgcacagcctc
aggatggacgccctctataaactctccatcgccaaccacatgagggacgaggtcttctgg
ttcccccacaacatggacttccgcgggcggacgtacccgtgcccgccctacttcaaccac
ctgggcagcgatgtgaccagggccatcctggtgtttgcggaggggaagcccctggggccg
ggcggtctgaaatggctgaagatccacctggtcaacctgacaggcttgaagaaacgcagc
tcgctggccggcaggttggagtacgccaacacaatcatggacgacatcctggactctgca
gacaaccccctcaacggtaagaagtggtggcagaatgcagatgaaccctggcaagccttg
gcctgctgtatggagatagccaacgctgtcagatcacctgaccccacacacttcatctcc
cactttcctgtgcatcaggatggttcgtgtaatggtctccagcactacgcagccctgggt
cgggatgtgatcggtgccacctctgtgaacctaattccctgtgaggtgccccaggatgtc
tacagcggggtggcacagcaggtggaggagttccgtgcgcgggactcagagaagggtctg
aagatcgcccaggtgctggagggcttcatcagcaggaaggtggtgaagcagactgtgatg
acggtggtgtacggggtgacgcgctacggaggacgcctccagatagagaagaggctcaag
gaggttgatgacttccccaaggagtacgtatgggacgcctctcactatctggtccaacag
gtgttcagcagtctgaaggagatgttcaccggcaccagagagatccaggactggctgacg
gagagtgccaggctcatcgctaaatcgggcaacacggtggagtgggtgacgcccctgggc
ctgcccatcattcaaccctaccaccggaccaggacgcagatgctgaagggtaccatacag
gacctaagtctccagatcacccatgactctaaacagaagccagacacagtgaaacagaag
aatgccttccctcctaacttcatccactctctggactccacacacatgatgctgactgct
ctctactgctacagcgccggcctgacgttcgtctccgtccacgactgcttctggacccac
gcccttacagtcgacacgatgaacaaggtttgccgggagcagtttgtggcactgcacagc
cagcccatccttcaagagctgtccaacttcctactgcagaaatactgctctgggctatcg
agcgaggtcaaaaacaataagtttatggagtaccggaggatgctgctactactggccaaa
gtgcctcaaacaggcgactttgatctccagcaggtgaaggaatccacttacttcttcagc
taa
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