Oncorhynchus keta (chum salmon): 118359293
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Entry
118359293 CDS
T09424
Name
(RefSeq) lysine--tRNA ligase-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118359293
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oke01007
]
118359293
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118359293
Enzymes [BR:
oke01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
118359293
Amino acid related enzymes [BR:
oke01007
]
Aminoacyl-tRNA synthetase
Class II (A)
118359293
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118359293
Prokaryotic type
Other AARSs
118359293
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
118359293
NCBI-ProteinID:
XP_052337537
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All DBs
Position
2:68871307..68884922
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AA seq
610 aa
AA seq
DB search
MLTLVVRTARHQVCQAFGVRAQGVKFALPSTVSVPALIQGNRWRGDKSELKRRMKAEKKA
SEKEAKVKEQVEQKQTNDQAVQNAYGGDEETLDPNQYFKIRTQAIQALKGTAEDPYPHKY
NVDLSLTGFIEKYNHLQPGDQLTDIVLNVSGRVHAKRESGAKLIFYDLRGEGVKLQVMAT
NRSYKSEEEFVRINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFVTRAKIITYLRSFLGGLGFLEIETPMMNLIPGGAV
AKPFVTYHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYHDLMDITEKLLSGMVKHITGEYKVKYHPEGPEGPTYEIDFTPPFRRVSMTHD
LEKEMGVKFPAADTYDSDETRKFFDELCTQKGVECPPPRTTARLLDKLVGDFLEVTCINP
TFICDHPQIMSPLAKWHRSEKGLTERFELFVFKKEICNAYTELNDPIRQRELFEQQAKAK
AEGDDESMSIDETFCTALEYGLPPTAGWGMGLDRLTMFLTDSNNIKEVLFFPAMKPDDNK
TAPLTEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgactctggtggtcaggactgccaggcaccaggtgtgtcaagcctttggggtcagg
gctcagggggtaaagttcgctctccccagcacagtgtcagtcccagctctaattcagggg
aatcgctggcgaggtgataaaagtgagctgaagaggcgaatgaaagctgagaagaaggca
tctgagaaggaagccaaagtcaaagagcaggttgagcagaagcagaccaatgaccaggca
gttcagaatgcatacgggggagatgaggagaccctggaccctaaccaatactttaagatc
cgcactcaagctatccaggctctgaagggcacagcagaggacccataccctcacaagtac
aatgtagatctgtcgctcacagggttcattgagaaatacaaccacctacagcctggagac
cagctaacagacattgtcctcaatgtatcaggtcgtgttcatgccaagagagagtccggg
gccaagttaatcttctatgacttgcgaggggaaggcgtcaagctgcaagtaatggcaacc
aacaggagctacaagtctgaggaggagtttgtgcgcatcaacaacaagctgcggcgtggt
gacatcatcggtgttcgtggtaatccagggaagaccaagaagggcgaactgagcatcatt
cccatagagatgaccctgctttcaccttgcttgcacatgctgccccacctgcactttggt
ctcaaggacaaggaaacacgatttcgccagcgatacctggatctgattctcaatgactat
gtgaggcagaagtttgtaacacgtgccaagatcatcacttacctccgcagcttcctgggt
gggctgggattcctggagattgagacgcccatgatgaacctgattcctggtggggccgtg
gccaaaccctttgtgacctaccataacgacctagacatgaacctttacatgaggatcgct
cctgagctctaccacaagatgcttgtggttggggggattgacagagtgtatgagattgga
cggcagttcagaaacgaaggcattgacctcacccacaatccagagttcaccacctgcgaa
ttctatatggcctatgcagattaccatgacttgatggatatcacagagaagcttctctcg
gggatggtcaagcacatcactggagagtacaaagtgaagtatcatccagagggtccagag
ggcccgacctatgagatcgacttcactcctcccttcaggagggtcagcatgacgcacgac
ctggagaaggagatgggcgtcaagttcccagctgctgacacctacgacagtgacgagaca
cgtaaattctttgatgagctgtgtacccagaaaggagtggagtgccctcctcctagaacc
actgcccgcctccttgacaagttggtgggagatttcctggaagtcacgtgtatcaacccc
acgttcatctgtgaccacccacagatcatgagccccctggccaaatggcaccggtcagag
aaaggcctgacggagcgttttgagctgtttgtatttaagaaggagatttgtaatgcctac
actgagttgaatgaccctatcagacagagggagctctttgagcaacaggctaaggccaag
gcagagggtgatgacgagagcatgtccattgatgagactttctgcacggcactagagtat
ggcctgccaccaactgctggctggggcatgggccttgaccgtcttaccatgttcctcaca
gactctaacaacatcaaggaggtgctgttcttcccagccatgaagcctgatgacaacaag
acagcccctctcacagagggcacctctgtgtag
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