Oncorhynchus keta (chum salmon): 118359298
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Entry
118359298 CDS
T09424
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118359298 (cdhr5b)
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Cadherin related
118359298 (cdhr5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
DUF6039
Motif
Other DBs
NCBI-GeneID:
118359298
NCBI-ProteinID:
XP_035593664
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Position
26:complement(34346069..34360402)
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AA seq
737 aa
AA seq
DB search
MEKKYPHFTLRTLLSFLLVFLLHRSTEAQQICFRAGETPPTIRENNAVGAVVTTIITEEG
VNLTIASNPADSFGLNGNDLTAVKVLDYETKTSFTIDLLCTKGEQSLTLIVVVLIENVND
NPPVFAESQYTLNVDELSPVGKSVGAIVATDADKDRLYYSLVPDTEGFRLQENSPNILVQ
HVLDYDAVTSVTLILSAQDTPTSTPPSFTATATIHVNIMDIDNRPPWFQPCTETILDMSK
ICLSSGYTGTVNLTEQVVGALPLLPGPVHAIDGDKGLNVPIMYRFPTGSESDIFQINQNT
GDITMSKAADIAGPLTLTVLALQTSNGDQFATTTVTIVVVKKSVNPPQFEKMEYEGFISA
DAGVDSMVLESKASNRPLKVQAKDTDYADGINPDVRYEVQGSTEFSITPQGFILMTKNVM
PGTVSMNLHAIDSSNAESTTAALKVEVMPGITTMAPTTTDIATTDMATTDMATTDMATTD
MATATHGAINSTTEGVLGAPGGYGPGDMAALGASLAVLLVISMVVMGLLVFRIQKGKTDW
RKLSEANIFRSSLGKGPGELKDGVQYTNEGFQNDGDTSSMGSKGQEEMDGKRSIGNGVTS
RAVEENVMKVSAPLYSNLLLDTSSLAGSDKADSEKEVKPILTKERRVEEGYKSVWFKEDI
DPNAKEEVVIIPDNGEREGDDDDDDDEEEEGFREEEEEYDNSSPQTPKVLFSDADMDDGR
GVRFEDFEKEKIQTSDL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaatatccacactttactttgaggaccttgttgagctttctgcttgtgttt
ttgcttcacagatcaactgaagcgcaacagatatgcttcagggctggggaaacgcctccc
actattagagagaacaacgccgttggtgctgttgtgaccacaatcatcacagaagaagga
gtgaacctaactattgccagtaatcctgcagactcttttggtctgaatggcaatgatctt
acagctgtaaaagttttggactatgagaccaaaacatctttcaccattgaccttctttgt
acaaaaggtgaacaatctctcactctaatagtagtggtacttattgagaatgtgaatgac
aacccgccagtatttgcagaaagccagtacactctcaatgtcgatgagttgtcacctgta
ggcaaaagtgtcggtgcaattgtagcaacagatgcagataaggatcgactctattacagc
ctagtgccagatacagagggttttagactgcaagaaaacagcccaaatatactagtgcaa
catgttcttgactatgacgcagtgacaagtgtgacacttatattatctgctcaggatacc
cccacatccacaccaccttcattcactgccacagccactatccatgtcaacatcatggac
attgacaaccgtccaccatggtttcagccctgcacagaaaccatacttgacatgtccaaa
atctgcctcagctctggatatacaggaacagtcaacttaacagagcaagtggttggtgca
ttgccattgctgccaggtccggtgcatgccattgatggtgacaaaggcttaaatgtgcct
ataatgtatagatttccaactgggtctgaatctgacatttttcagatcaatcagaacact
ggggacatcaccatgtcgaaggcggcagatatagcgggcccactgaccttaacagttttg
gctttacagacatccaacggtgaccagtttgcgaccacaacggtcactatcgttgttgtg
aaaaagagtgtgaacccgccgcagtttgagaagatggagtatgagggcttcatctctgca
gacgcgggtgtagacagcatggttctggagagcaaagcctccaacaggccactcaaggtc
caggccaaggacacagactatgctgatggaatcaaccctgatgtgagatatgaggttcag
ggaagcactgaattctccattaccccgcaaggcttcatcctcatgactaaaaatgttatg
ccaggcactgtttccatgaatttgcatgccatcgactcatccaatgcagaatcaactaca
gcagctctcaaggtggaggtcatgccagggattacaaccatggccccaaccaccactgac
atagccaccactgacatggccaccactgacatggccaccactgacatggccaccactgac
atggctactgccacccatggcgccatcaactccacaacagaaggggttcttggggcccca
ggtgggtatggtcctggggacatggctgccctgggtgctagcctagctgtgttactggtc
atctctatggtcgtcatgggcctgctcgtcttccgcatccagaagggcaagacagattgg
aggaagctgtcagaggccaacatcttccgcagctctcttgggaaaggtcccggcgaactc
aaggatggggtgcagtacaccaacgagggcttccagaatgacggagacactagcagcatg
ggatccaaaggccaagaggagatggatgggaagcggtccatcgggaatggagtgacctcc
agagctgtggaggagaatgtcatgaaggtctcggctccactgtactccaaccttctgctt
gacaccagcagcctggcagggtctgataaggccgacagcgagaaggaggtgaagcccatc
ctgaccaaggagaggcgtgtggaggagggctacaagtcagtctggttcaaagaggacatc
gaccccaatgccaaggaggaagtggtcatcatacctgacaatggggagcgggaaggtgac
gacgacgatgatgatgatgaggaagaggaggggtttagagaggaggaagaagaatatgac
aactcgtcaccacagaccccaaaggtgttgttctctgatgctgatatggatgatggccgt
ggagtgaggtttgaggattttgagaaagaaaagatccagacgtctgacctgtga
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