Oncorhynchus keta (chum salmon): 118359537
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Entry
118359537 CDS
T09424
Name
(RefSeq) partitioning defective 6 homolog beta-like
KO
K06093
partitioning defective protein 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118359537
09144 Cellular community - eukaryotes
04530 Tight junction
118359537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118359537
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
118359537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
118359537
NCBI-ProteinID:
XP_052337633
LinkDB
All DBs
Position
27:complement(11198607..11243114)
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AA seq
387 aa
AA seq
DB search
MNKNHRVPSNRTLGAVEVKSKFVAEFRRFSLDRSKPGRFDEFYRLLQHMHRIPNVDLLVG
YADVHGDLLPINNDDNYRKAISVADPVLRLFLQRKEEADYSAFGLDSLTRPKKTVLAAML
LRPDANRKKPLVIISLPRDFRPISSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSV
RVTPQGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVQGKSLDQVTDMMIANS
HNLIVTVKPANQRNNIVRSGGGGAASGSSGHSSDSGTSFYGYSSPGIVVATTPADIIQNF
HPEELESDEDDEDLVIEVDGEAMPIPRTSSASCTIPFIPRYMPHLDLRTTNGALASHNLS
GSLGTLSTADRGLEGRSLEEEGTVITL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaccaccgagtgccgagcaaccggactctgggcgccgtggaggtgaagagc
aagtttgtggctgaattccgccggttctccctggaccggtccaagccgggccggtttgat
gagttctataggctcctacagcacatgcaccggatcccaaacgtggacctgctggtgggc
tatgctgacgtccacggtgacctgctgccaatcaacaacgatgacaactaccgcaaagcc
atctctgtggctgaccctgtgctacgcctcttcctgcagaggaaagaggaagccgactac
tctgcgtttggtctggactctctgacccgtcccaagaagacggtcctagcggccatgttg
ctacggcctgatgccaaccggaagaagccccttgtgatcatcagcctgcccagggacttc
aggcccatctcctccatcatcgatgtggatatcctccctgagacacaccgccgggttcgc
ctctacaagcatggccaggagaaaccactgggcttctacatccgagatggctccagtgtc
cgggtcacgccccagggcctggagaaggttcctgggatcttcatctcccgcatggtgcct
gggggcctggctgagagcactggcctgctggcagtcaacgacgaggtgcttgaggtcaac
ggcatcgaggtgcaaggcaagtccctggaccaggtgacagacatgatgatcgccaacagc
cacaatctcatcgtgactgtgaagccggccaaccagcgcaacaacatcgtacggagtggc
gggggcggggcagcgtccgggagctcggggcactcgtccgacagtggcaccagtttctac
ggctactcctccccgggcattgtcgtggcgacgactccggcagacatcatccagaacttc
catccagaggagctggagagtgatgaggatgatgaggacctggtgatcgaggtggacgga
gaggccatgcccatcccacggacctcctcggccagctgtaccatacccttcattcctcgc
tacatgccccacctggacctccgcaccaccaacggagccctggcctcccacaacctctcc
ggctcactgggcacgctcagcactgccgacaggggcctggagggaaggagcttagaggag
gaaggcaccgtcattacactgtaa
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