Oncorhynchus keta (chum salmon): 118359602
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Entry
118359602 CDS
T09424
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oke01001
]
118359602
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118359602
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118359602
Protein kinases [BR:
oke01001
]
Serine/threonine kinases: Other
Other
118359602
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118359602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
WDR55
LisH
Beta-prop_WDR19_1st
ANAPC4_WD40
WAPL
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
118359602
NCBI-ProteinID:
XP_052337871
LinkDB
All DBs
Position
27:complement(21137939..21161674)
Genome browser
AA seq
1571 aa
AA seq
DB search
MASASASVDSKAELTALLEHWLEKWEGEQQASTPDLVNILTKISELVERETEEYHKADPD
PFDDRHPGRADPECVLGHLLKILFKDDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPG
LETAVVFQEKEGIVERLFKWAQEAEQPLMIYATGLLAGAMENQDIAANYREENSVLVPLM
LQRLRELQAKDTENRKEFKRPSPRKALGEPLLPLDEETVDGGFEDTPFSSGNNGTERVEK
GPEEDRDENPFPSGNNRTEKGPEEDIEESPFPSNESDNSSHKISSCTSSSIKGLMKPVSA
PQSLSHRDFPDGRAEGSSHLKRRAERENGRKVKQKLNFSLPEPERSFSELSNSSWSEMSP
WVIGNNYHLYPLTPEMEQRLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQ
LTFEALKYLASLLLHKKFAAQFVAHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMER
VCMLPHSILSDVVSYTLWLLECSHASGCCHATMFFSISFSYRAVLELFDRQDGLRRLVNL
ISTLEILNPEDQAALLSDDQIFSSRQTAKHTCMALRRFFEAHLAIKVEQVKQSLQRTEGG
APIHPQPYYKACSYTHEQVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACD
WRTYYGRSDTVRYALDILSILTVIPKTQLLMAESVAVPDGEGGNAVSTVGMSVVLLVAEG
EVFVNDAEIQKSALQVVINCVCAPDKRMSSIGKFISGTPRRRLPQTTKSSESVLSKMWNV
VQSNNGIKVLLSLLTVKMPITDADQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQ
LMKEPVLQDKRSEHVKFCKFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEK
ELLLLIRNHLVAKGLHDTATTLTKEADLPMAILPHPSSSALLPVVVPPPPASPAPALPRT
PRLANGVAARLASHGSHPSMPLSVQPRPSTSQLLALPPAAPPLLTPHQSNGSPLIGRIVF
TRERPSPCPVPASCKKPRVLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQ
HARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHL
IFSRFRPMSVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHS
SAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGT
KEHIAHIYDIQTGQKTLTLNYPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSARAIHKF
DKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQA
DDDDDIMEMQTKTPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSV
NTDTVCRLYEVGRQRLAEEEEDEDDQEDDDQDDDDDDDDDSDDDMDTDPLIAELDNENGE
DEEDEEDGNNELSLSDDEVSRLLEGDGEEEDDDDDDDDSDDDEEDGDLALDNTDSSDNSD
LEDDIILSLNE
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggattccaaggcagagctgactgctctgctggagcat
tggttggagaagtgggagggggagcagcaggctagcacaccagacctggttaacatcctc
accaaaatctcagagctggtggagagggagactgaggaatatcacaaagctgatcctgat
ccttttgatgacaggcaccctgggagagctgatccagaatgcgtcttgggtcatctgctt
aagatcctgttcaaagatgatgacttcatgaatgcgctggtgaatagctatgtgatgacc
agcagagagctcacccttaacacggcagcctgtcgcttgctgcagaacatcatgcctggg
ttggagaccgctgtggtctttcaggagaaggagggcatagtggagaggctgtttaaatgg
gcccaggaggctgagcaacccctgatgatctatgctacgggcctgctagctggagccatg
gagaaccaggacatcgctgccaactacagggaggagaactcagtcctggtgcctctaatg
ctgcagcggctacgtgagctgcaggccaaggacactgagaacaggaaggagtttaaacgg
cccagtcccaggaaggccctgggggaacctctccttcctctggatgaggagactgttgac
ggaggctttgaggacaccccgttctcctctgggaataacggcacagagagggtggagaag
ggaccagaggaggacagagatgagaaccccttcccctcagggaataacagaacagagaag
ggaccagaggaggacatagaggagagcccattccccagcaatgagtctgacaactcttcc
cacaagatcagcagctgcaccagctcgtccattaaaggcctgatgaaacctgtgtctgcc
ccgcagtctctgtcccaccgggacttcccagatggcagggcggagggcagcagtcacctc
aagaggagggcggagagggagaatggacggaaggtgaaacagaagctgaacttctccctg
ccggagccggagaggagcttcagcgagctgtccaacagcagctggtctgagatgagcccc
tgggtgattgggaacaactatcacctttaccctctgaccccagaaatggagcagaggctc
atcctacagtacctcacccctctgggggagtaccaggagctgttggctgtcttcatgcag
atgggagcctgtgagctgctcatccattacatggacctgaagcagaccaacgatgtacag
ctcacctttgaggctctcaagtacctggcctccctgctcctgcataagaagtttgcagcc
cagtttgtggcccatggaggagttcagaagcttctggagatccccaagccttccatggcc
gccacaggggtgtctctgtgcctctactacctggcctacaaccaggatgccatggagagg
gtgtgtatgctgcctcactccatcctgtctgacgtggtgagctacactttgtggctgttg
gagtgttcccacgcctcgggctgctgccacgccaccatgttcttctccatttccttctcc
taccgagccgtgctggagctcttcgacaggcaggacggcctccgacgcctcgtcaacctg
ataagtacgctggagatcttaaaccctgaagaccaggcggccctgctgagtgatgaccag
atcttctccagcaggcagacagccaagcacacctgcatggccctgcgcaggttcttcgag
gcccatctggccatcaaggtggagcaggtcaagcagtccctgcagcggactgaggggggc
gctcccattcaccctcagccctactacaaggcgtgcagctacacccatgagcaggtggtg
gagatgatggagttcctgatcgagtacggcccagtcagattgtactgggagccagctgag
gtcttccacaagctgtcctgtgttcagctgctgctgcagctcatctccattgcttgtgac
tggaggacctactatggcagaagtgacacagtgcgttatgccctggacatactgagcatc
ctgacggtgatcccgaagacccagctgctgatggctgagtctgtggctgtgccagatggg
gaggggggtaatgcagtctccactgtgggtatgagtgtagtcctgttggtggcggaggga
gaggtgtttgtgaacgacgccgagatccagaagtctgctctgcaggtggtcatcaactgt
gtgtgtgctccggacaaacgcatgtccagcatcggcaagttcatctcgggcactcctcgc
agacgcctgccccagactaccaagagcagcgagagcgtgctcagcaagatgtggaacgtg
gtgcagtctaacaacggcatcaaggtgctcctgtccctgctgacggtgaagatgcccatc
acagatgcggatcaaatccgggccctggcctgtaaggccctggtgggtctgtcccgctcc
agctcagtcagacagattatcagcaagctgcctctcttcagcagcggacacatccagcag
cttatgaaggagcctgtgcttcaagacaaacgcagcgaacacgtcaaattctgcaagttt
gcggcagagctcatcaagcgagtgtctggtaaacccctcatgatagggacggatgtgtcc
ctggcctggctgcagagggctaatgtggtggcccagtccaggatctccttccctgagaag
gagctactgctgttgatccggaaccacctggtggccaaaggcctgcatgacacggccacc
acactcaccaaggaggccgacctccccatggccatcctcccccacccatcttcctcagct
ttacttcctgtcgttgttccccctcctcctgcctctcctgcccctgccctcccccggacc
cctcggctggccaatggggttgcagcgcggttggcgagccacggctctcatccgtccatg
ccgttgtcagttcagccccgtccctcgacatcgcaactcctcgcactccctccggccgcc
cctcccctgttgacccctcaccaaagcaacggctctcccctaattggtcggatcgtgttc
acgcgagagcgcccgtcgccatgccccgtgcctgccagctgtaagaagccgcgggtgctg
aggcagaagtcagattacggtgccttcagccagagtccagccatgaagaaacagctggac
agacacctgccctctccccccgccctggacagcatcatcacagagtacctgagggagcag
cacgcgcgctgcaagaaccctgtcaccacctgcccccctttctccctcttcaccccccac
cagtgccccgaacccaagcagaggcgccaggccccaaccaacttcacctcccgaaacaca
cgcagggtcgtctaccccaagtatggaggggtggacgggggctgcttcgacagacacctc
atctttagcaggtttcgtcccatgtctgtgttcagagaggcagatgaggatgagagtggg
ttcatgtgttgtgccttctctgcccgtgagcggttcctgatgctggggacgtgtacgggc
cagctcaaactctacaatgtgttcacaggccaggaggaggccagctacagctgccacagc
tctgccatcacacacctagagccatcacgggatggctctctgttgttgacatcggcatca
tggagttatcctctgtctgcactgtggggcatgaagtcagtgttcatcatgaagcattcc
ttcttagatgatcattatgtggagttcagcaaactctcacaagaccgagttattggcaca
aaggaacacatagcccacatctatgacatccagacggggcagaaaaccctgaccctcaac
tacccggacctggccaataactacaagaggaactgtgcgacctttaaccccactgacgac
ctggtgctgaacgacggtgtactgtgggacgtgcgctcggctcgtgccatccacaagttt
gacaagttcaacatgaacatcagtggagtgttccaccccaatggcctggaagtcatcgtc
aacacggagatttgggacctgcggacttttcacctcctccatacagtgccagctctggac
cagtgtaggatcgtcttcaacaacaacggcacggtcatctacggagcgatgctccaggca
gatgatgatgatgacattatggagatgcagacgaagactccctttggctcctccttcagg
acgttcaacgccaccgactacaaacccattgccaccattgacgtgaagaggaatatcttt
gacctctgcacagacaccaaggactgctacctggctgtgattgagaaccaggactcggtc
aacacagacacggtgtgcagactgtacgaggtgggacgccagagactggctgaagaggag
gaggatgaagatgatcaggaggatgatgatcaagacgatgacgatgatgatgatgatgac
tctgatgatgacatggacacagaccctctgatcgctgagctggataacgaaaacggggag
gatgaggaagacgaggaagacgggaacaatgaattatctctctccgacgatgaggtgtct
cgcctgctggagggggatggagaggaggaggatgatgatgatgatgatgatgactcggat
gacgatgaggaagatggggaccttgccctggataacacagacagctctgacaactctgac
cttgaggatgacatcatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
