Oncorhynchus keta (chum salmon): 118359680
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Entry
118359680 CDS
T09424
Name
(RefSeq) methyl-CpG-binding domain protein 5-like isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118359680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118359680
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
118359680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
118359680
NCBI-ProteinID:
XP_035594184
LinkDB
All DBs
Position
27:complement(26489974..26501278)
Genome browser
AA seq
1546 aa
AA seq
DB search
MEIWPCGNPNPIKVLQSSFYKMMGGSESGSGDKDGVHTVAIQVPIGWQRRAKDGLVVYVS
PSGAVLSSLEEVKSYLLTDGTCKCGLECPLVIHKVFNFSLGVKIQQHSQPVGKAEQDMTK
LCNHRRKVVAMAALCRSMQASQLPYVARHTEVTSGIMENRDPKRMRVDREEKERGTYTSK
HHLVQSRPNNNLHPNSCGSPKNSPQIVYSYNGSSPLSHNSTNSYHTPDILRRLPPPLNLP
PNTSPFSSYGAPQRSPCTPTPQNLSQGQRAPQTPEALRSPHMGPLSPPPPSSPGTLGRGG
QSHQHGIIVGSPLSPSCSPAPSVSMNCPSPRQRSRHPSASSAHSEQGVGGVVLGGYPARR
ISSSSSHSPIPGGSPILHFSKYKLEDILEQFKNSGNSSTNNHILHPNSLSNQNNPHILSL
ALEKVGMPTKAPASASGMEISAGPSGLPLGKFLNHQKQPHPASFPASSLLSAAAKAQLAS
QMIHNQSSNSRSILNSALSLEVSGESKQLKVTNSTLHNSLPSIARPLTAASPLLSLSQPL
ASSPLHLSRTDRTSHRKRQRRSPTVLSMLKESQMTGPRTPGDVLNLSSHSQPSSTSASPY
PAMLENHLQALRLSVRHSGTLAGPQKQPDGALDFTTIMAGQPDPPTQPLSALLHLLSVQN
AQATGAQPGSGHCTGGMRQSPRQSPSPSHLNIRPFSVQSPTNHSTTQGPSQPLSPSQSKS
RRGNAQSPSRPHTRTSPKQRRSPSMALSNAQSAQYCSSPSPTPHTPNRLWQAQNQPMDAT
TIQSPIGQAFPDVSESMEMESMSTLGPGLNSTSTSNHSSSVTSYSSTTSPRPLDLSNHML
ALLAASSTTPLGDGCLDRTTGNNTTGVQEPQSVDLQGSTVTKPPGGCSPQALGDSTCSLP
LAEAFPFMSQEQLLQLLSATAGLPSLLDPTILGSLPLGLWIGGQQGHLPISNTPQQHHQL
PDQQLLQQSEQQLLLQHEQQQKQHQTAHLNHNFPFSLFPCLMGGQGELPLNLLGLLNPLL
PPSAAPTPGQECDLGMGEKLGLQALLMASLLLGQQQTAMLPLSGLGQLCLDLPFRQHIPA
LLDGLSLDKGSGLLDPSSLPGPGLLEALQGLLPPADGHLQALQSLLLSTPLPPPAFLSLS
PDLLTAALGSTGLPPAPHLPLTQQPPPQVSASGHDGGMETLIPLSVQGKDNPVLHQLLPT
LLNPGVLGDLSALTSLHSLLGLGAGPLFLPPVQASALGMPLLQGPDGAMNLLNNIQLNMA
PPSEGEKPISLQETDSSSLQEDIPANRLTPETAPSPCPALAPVSQRGEGSVVSVLDPYAS
FMDTIYTSFLQVSAKEQEAVQSGTDAFGALPPSYPGERRSPSALLPQVSAPLSLSPRQAC
TLRNLDLSRLNMEAAHSPAQGTPKPSNDGSNTPPQNKLEFPECHTNPPLLPIYLEEAKTD
SYSQAVSDRQGDRPQAGGYQSPRDGSSCPKEETGGLQHTEQSRNQTAQMGGARRGRKRKQ
TLQNVLEDFRELDSPGLEEPKPRVVLLKPERSVRGRRRRGARSQRQ
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggccgtgtgggaaccccaaccctataaaggtgctgcaaagcagcttttac
aaaatgatgggaggcagtgagagtggcagtggagacaaggatggagttcacactgtggca
atacaagtccccattggctggcagaggagagcgaaggacgggcttgtggtgtatgtcagt
ccaagtggcgcagtcctgtcctcactggaagaggttaagtcatatctgttgaccgatggc
acatgcaagtgtggcctcgagtgtccgctggtcatccacaaggtgtttaactttagccta
ggggtcaaaattcaacagcacagccagccggtggggaaggcagagcaggacatgacaaag
ctctgtaaccatcggaggaaagtggttgccatggcagcgctctgtcgcagtatgcaggct
tcacaactgccctatgttgcccgtcacacagaggtcaccagtggcattatggagaacaga
gatcctaagaggatgagagtggacagggaagaaaaagaacgtggcacttacacctccaaa
caccatctagtccagtccaggcccaacaataacctccaccccaactcttgtggcagtcct
aaaaattctccccaaattgtgtattcttacaatggctcctcacccctctcacacaatagc
actaactcttatcacacgcctgatattttgaggagactgccacctcctctcaatctcccc
cccaacacctctccattctccagctatggggcacctcagaggtccccatgcacaccaacg
cctcagaatctcagtcagggtcagagggcaccacagactccagaagccctcagatctcct
catatggggcccctctctccccctcctccctcctcccctgggacactgggcaggggaggt
cagagtcatcaacatggtatcatcgttgggtctcccctgtccccctcatgttcccccgct
ccctctgtgagtatgaactgcccctctccccgccagcgctcacgccacccctccgcctct
tctgctcactctgagcagggggtgggaggggtggtgcttggtggctaccccgccagaagg
atatcctcttcctcctcacactctcctataccaggggggtcccctatcctccatttctca
aaatacaagcttgaggacatcttagagcagtttaagaactctggcaacagtagcactaat
aatcacatccttcacccaaactcactgagcaaccaaaacaatcctcatatcctctctcta
gctcttgaaaaggttgggatgcccacaaaggcacctgcttctgcctcaggcatggagatc
agtgctggtccttctggtttgcctcttgggaagttcttaaaccaccagaagcaaccccac
ccagcttcttttcctgccagcagtctcctctcggcagcagccaaggcccagctggccagc
cagatgattcacaaccagagctccaattcgcgcagcatcctcaactcagccctctctttg
gaggtctcgggggagtctaagcaattgaaggtaacaaacagcactttacacaacagcctt
ccctcaatcgctaggcccctgactgcagcctcccccctgctttccctctcccagccccta
gcctccagtccccttcacctctcccgtacggaccggacatcccacaggaagcggcagcgg
cgttcgcccacagtgctcagcatgctgaaggagtcccagatgaccggtcccagaaccccc
ggcgacgtgctcaacctctcctcgcactctcaaccctcctctacctcggcctcgccctac
cccgccatgttagagaaccacctccaggccttaaggctctcagtccggcactctggcacg
ctcgcagggccccagaagcagcctgacggcgccctggatttcacaacaatcatggcaggt
caaccggatccccccacccagcctctctctgctctgcttcacctgctcagtgtgcagaac
gctcaagccactggagcccagcccggctctggacactgcacaggaggcatgaggcagagc
cccaggcagtctccctcgccctcccatttaaacatcagaccattctccgtgcagtccccc
actaatcacagtaccacacaaggcccatcacagcccctctctccctctcagtcaaagtcc
aggcgaggtaatgcacagtctccgtctcgaccacatacgaggactagtcccaaacagaga
cggtctccttccatggccctgtccaacgctcagtcagcacaatattgcagtagcccctcg
cccaccccacacacccctaataggctgtggcaggcccaaaaccaacctatggatgccacc
accatccagtcacccattggccaggcctttcctgacgtcagtgaatcaatggagatggag
agcatgtcaacactaggccctggtctcaacagcacctccacctccaaccatagcagcagc
gtcaccagctacagcagcaccacctcccccagacccctggatctcagtaaccacatgctg
gcactgctggcagcctcttccaccacacctcttggggatgggtgcctggacagaaccacc
ggcaacaacacgacaggggtgcaagaacctcagagtgttgatcttcagggctccacagtg
accaaacccccaggaggctgcagcccccaggccctgggggactccacttgctccttaccc
ctggctgaagccttccccttcatgagtcaggagcagcttctccagcttctatctgccacg
gccggcctgccctccctcctggaccccaccatcctgggctctctgcccctgggcctgtgg
attggcggtcagcagggtcacctccccatctccaacacacctcagcaacaccatcaactg
cccgatcaacaactactacaacaatcagaacaacaactactgttacagcatgagcaacag
cagaaacaacaccagactgcccatctgaaccacaactttccatttagcttattcccctgt
ctaatgggaggtcagggagagctgcctctgaatctcctgggtctgttgaacccactgcta
cccccttctgctgcccctaccccaggccaggagtgtgatctggggatgggggagaaactg
ggcctccaggctctcctcatggcctccctgctactaggccagcagcagactgccatgttg
cccctgtctgggcttggccagctgtgcctggacctccccttccggcagcacatcccagcc
ctgttggacggtttgtctctggataaagggtctggactcctggacccgtcatccctcccc
ggccctgggctccttgaggccctccagggcctgcttcccccagctgatgggcacctccag
gccctgcagtcgcttctgctctccacccccctgcctcccccggccttcctttccctcagc
cctgatctgctaactgctgccctgggctctactggcctcccgcctgcccctcatctcccc
ctaactcagcaacccccacctcaggtctcagcttcaggccatgatggggggatggaaact
ctaatccccctgtctgtccagggaaaggacaaccctgtcctccaccagttactgcctact
ctcctcaacccaggggttctaggagacctgtctgctctgactagcctccacagtcttctg
gggctaggtgcaggccctctcttcctgccccctgtacaggcctctgccttgggcatgcct
ctgctccagggccctgatggggccatgaacctcctcaacaacatccagctcaacatggca
ccaccctcagagggagaaaagccaatctccttacaggaaacagacagctcctcccttcag
gaggatattccagccaatcggcttaccccagagactgcgcccagcccctgtcctgccctg
gcccccgtgtcccagcgtggagagggctccgtggtgagcgtcctggacccctacgcttcc
ttcatggacactatctacacctccttcctccaggtcagtgctaaagagcaggaagcagtt
cagtctgggacggatgccttcggtgccttaccgccctcctaccctggggagcgccgttcc
ccctccgctctcctccctcaggtcagtgcccccctctccctgagccctcggcaggcctgc
accctgaggaaccttgacctgtcccggctcaatatggaggcagcccactccccggctcag
ggcacccctaaacccagcaacgatggctccaacacgcccccgcagaacaagttggaattc
ccagagtgtcacactaaccctcctctgcttcccatctacctggaggaagccaagacagac
tcgtacagccaggctgtgtcagatcggcagggggacagaccccaggcaggagggtaccag
agtcccagagacgggagcagctgccccaaggaggagactgggggtctacagcacactgag
cagagcaggaaccaaactgcacaaatggggggagccagaagaggcaggaaaaggaaacaa
acgctacagaatgtgctagaggacttcagagaactggattctccaggcctagaggaacct
aaacccagggtggtgctgctgaagcctgagaggtcggtccggggcaggaggcggcgggga
gccaggtcccagagacagtga
DBGET
integrated database retrieval system
