Oncorhynchus keta (chum salmon): 118359714
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Entry
118359714 CDS
T09424
Name
(RefSeq) protein SOGA1-like isoform X1
KO
K27704
microtubule cross-linking factor
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118359714
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118359714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Gp5_trimer_C
Motif
Other DBs
NCBI-GeneID:
118359714
NCBI-ProteinID:
XP_052338039
LinkDB
All DBs
Position
27:28508990..28599526
Genome browser
AA seq
1869 aa
AA seq
DB search
MTKTKADVNSPTHFVSPKERRHRHKMESGTESADSGQAKPQQQHQFEQQPVVQPIQVNAK
KKNNRAPSPARPKDVPGWSLTKIRGGIGTPTLSVKPGSIHLGSRVSRRSPVSGKETKSEK
GKLTGKSTVSVASAQKSSSKSMKGGRRKVSDASNASDDQSKDSGCAAGKRSSTDSSSELS
DCASEENKLSTDALSSDTESNSRGGGLDADKPSSDCGHGPPDRGSRGDHHAKTPVDKDRI
SLGVETVGGSISPGDERSLTSFDSRVPASTSLAFSDLTEEFVDGMHEEFVREIEELRSEN
DYLKDEMEELRSEMLEMRDMYMEEDVYQLQELRQQFDQANKTCRILQYRLRKAERRSLRV
AQTGQVDGELIRTLEQDVKVAKDVSIRLHNELDSVEKKRGRLEQENEELRVRLQDLEVAK
QVLQAEMEKQRENSLKKRGGRPNNKPEKKPSVQQEDNSDLKCQLHFAKEESVLMCKKLTK
MAKDSEAMREELAKYRSVYGDVDASLTVEEVNDSPHTREAEVRVHLKLVEEEANLLSRRI
VELEVENRGLRAEMDDMKGQELPPGLGGMGGPGGGGLDNVMELQRHLQFVEEEAELLRRS
LLEMEEQNKLLMNEINRYKSELPLTLDPNQDDSSSISLLEDGHGGGALISTEAPHEELLQ
AARLQIGELSGKVKKLQYENRVLLSNLQRCDLASYHSSSRPALETDAEAGDSAECLPSQA
CREGPIGGENKPLEEKEKKTSTGVPIHLHGNVPLGLNDHEALLAMRDQARLISTAIQLLT
ASDSNCPSLSLYRKISSNSSGETAEPCVPEKSQQSQPSELQDLPLVEALTGRLRALHTQL
QAFVKRVESLGSAPPGREQVEVASPLPLLSEAGDSVVDTPSASHPCPPDDQAGEITAGQK
QPDFRDQSEREVKGQEEEEGDSHIDNNKNQVKQETDTALQISELQALLLEARDNACRTQE
ELTVERQEERIVERQEERTVERQEEQTVERQEERTVERQEERTVERQEELTVERWDHRGP
THSSSQTFTQLQEEHQKALTRRDFQLQSLSLQTRLQQKFWSQERNLMLQESQQLKQTLLL
LSLKLRCFLKQWRLGRKLDTEAKDVLEVNSLKDLYLLLEEESLAAHPQHGDNKITSAEEQ
HLCPTISKELCVLEKSYTQTSGVSSTLADLKGALQDLSGELREERQGSQELTQQFARAKA
SWEVERTELKSLITQLESKAGLAALAGGEKDLQGPPDLKVALKREREEHQHLLADSYAAV
MDLTKQLQMGERNWSREKLELIEHFSQERGQWEQRLQCKMSLHYKTTPETKTALDVVTNG
TNLSRTKSMLEGLLEACPFRQEVNGTANEEGEKDRPSTQAPPLRTHTDPGDLTRKNWKYL
TNEMALMEQGDAPFKTWDCPSSPNSFLDLESIQRSYTAPDKTGIRIYYSPPTMRRMESRL
AKEKQDKPQAQQGHLSRASTPSDAVAPEGQPPSSASSSSSYDQWLSSLSKQHRDLLENSS
GGAGVAPFHGLEISANLSDDMKEMTNCVRQAIRSSSLERKCSKDASSQTVGVSSRSTQTV
QFVSVGLQTDGLGSRGVGGFHTKSSWSPRPSSSLASARSRHISSSLDKVHSRIDRPCCSP
KFGSPKLQRRISASSSKLDGGGLSSASSRDRSLWNLHQRSSTSSGSAWARSTTTRDSPVL
SGLNDGLSSLFSVVEHSGSVESLWKSEPGASPARQAAGKPSGPGPDTGAQKYGPFQEFFR
NVCGRTGTTMPGGGERGQREVGAMDEPKPECLSGVSLVGNDSVTKIVNKRFMRQMPREEL
GATANDLTAKDLTLSSSMEDAACDCNSQSLTSCFARPSRSATRHSLGHCMHRSQEPPTAT
EERVDAGNE
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacaaaggcggatgttaattcgccaactcactttgtctcgccgaaggaaagg
agacacaggcacaaaatggaaagcgggacggagagcgccgacagcgggcaggcgaagcct
caacaacagcaccagttcgagcaacagcccgtagtgcagcccattcaagtcaacgcaaag
aaaaaaaataatcgggctccatcacccgccagacccaaggatgtgcctggatggtccctc
accaagatccgtggaggaatcggtacaccaacactgagcgttaaaccaggatccatacat
ttaggcagccgggtgtccaggcgtagtccggttagcgggaaagagacgaaatctgagaaa
ggaaaactgacgggaaaatccacggtatcggtagccagtgcccagaagagcagcagtaaa
tcgatgaaaggtggtcggaggaaagtgtccgatgcgagcaacgcctccgacgaccagagc
aaagactccggttgcgctgcgggcaaacgttcgtcaacggatagcagttccgagctctcg
gattgtgcctcggaggagaataaactatccacggacgctctgagtagtgacaccgaatcc
aacagccgaggcgggggtcttgatgccgataaaccaagcagtgactgcggacatgggcca
ccggataggggtagtcgtggtgaccatcacgccaagaccccagtggataaggaccgaatc
tccctgggagtggagaccgtaggggggagcatatctcccggggatgaacggtctctcacc
tcgttcgacagccgggtgcctgccagcacatccctagctttctccgacctgacggaagag
ttcgtggatggcatgcatgaagaatttgtcagagaaatcgaggaactgagatcagagaac
gattacctaaaagatgagatggaggagctgcgctctgagatgttggagatgagggatatg
tacatggaggaggatgtgtaccagctgcaggagctgaggcaacagtttgatcaggccaac
aagacctgccgcatcctgcagtaccgcctccgcaaggccgagagacgcagcctccgcgtg
gcccagacgggacaggtagacggggaactcatccggaccctggagcaggacgtcaaggtg
gctaaagacgtgtccatccggctgcacaatgagttggactctgtggagaagaagaggggt
cgtctggagcaggagaacgaggagctgagggtcaggctccaggacctagaggtggccaag
caggtcctgcaggctgagatggagaagcaacgagagaactctctgaagaagagaggcggt
cggccaaacaacaagccagagaagaagccatctgtccagcaggaggacaactctgacctc
aagtgccagctccattttgccaaggaggagtccgttctcatgtgcaagaagctgaccaag
atggccaaggacagtgaggccatgcgggaggagctggccaagtaccgctcggtctacggc
gatgtggacgcctcactcaccgtggaggaggtcaacgactcaccccacacccgcgaggcc
gaggttagagttcacctgaagctggtggaggaggaagccaacctgctgagccggcgtatc
gtcgaactagaggtggagaaccgtggcctacgggccgagatggacgacatgaagggccag
gagctgcctccagggctgggaggcatgggaggccctggaggaggaggtctggataacgtg
atggagctccagaggcacctgcagtttgtggaggaggaagcggagctgctacggcgctcg
ctgctggagatggaggagcagaacaagctgctgatgaatgagatcaaccgctacaagtcg
gagctgccgctgacgttggacccaaaccaggatgactcctcgtccatctctctcctggag
gatggtcatggtgggggagctctcatcagcaccgaggccccccatgaggagctgctgcag
gccgccaggctccagatcggggagttgagcggcaaagtgaagaagctccagtacgagaac
cgtgtgttgctgtccaacctgcagcgctgcgacctggcctcctaccacagctcttctagg
cccgccctggagaccgacgctgaggcaggggactcggccgagtgcctccccagccaagcg
tgccgggaaggccccatcggaggggagaacaagcccctggaggagaaggagaagaagacg
tccacgggggttcccattcacctgcacggtaacgtccccctggggctgaatgaccatgag
gccctgctggccatgagggaccaggcccgcctcatctctacagccatacagctgctgacc
gcttccgattccaactgcccctccctctccctctaccgcaagatctcctccaactcctcc
ggggagactgcagagccctgtgtcccagagaagagccagcagtcccaaccctcggagctc
caggacctgcccctggtggaggctctgacgggcaggctgcgagcactgcacacacagctc
caggccttcgtgaagcgagtggagagccttggcagcgcccctcctgggagggagcaggtg
gaggtggcatcccccctgcctctactgtccgaagctggagactccgtggtggatacgccc
tctgcctcacacccctgccctccagacgaccaggcgggtgagatcactgcagggcagaag
cagcccgactttagggaccaatcagagcgcgaagtgaaaggtcaggaggaggaggagggt
gacagccacattgacaacaacaagaaccaggttaaacaggagacggacacagccctgcag
atcagtgagctgcaggcccttctgttggaggcaagggacaatgcttgcaggacgcaggag
gaactgactgtggagaggcaggaggaacggattgtggagaggcaggaggaacggactgtg
gagaggcaggaggaacagactgtggagaggcaggaggaacggactgtggagaggcaggag
gaacggactgtggagaggcaggaggaactgactgtggagagatgggatcacagaggcccc
acccacagcagctcacagacattcacacagctgcaggaggagcaccagaaggccctgacg
agaagggacttccagctacagagtctgagtctgcagacgcggctgcagcagaagttctgg
agccaagagaggaacctgatgttgcaggagtcccagcagctcaagcagaccctgctgctg
ctcagcctcaagctgcgttgcttcctcaaacagtggcggctgggacgcaagctggacacg
gaggccaaggatgtcctggaggtgaacagcctgaaggacctgtacctgctgttggaggag
gagagtctggccgcccacccccaacatggagacaacaagattacctccgcagaggagcag
cacctctgccccaccatctccaaggagctctgtgtgctggagaagagctacacacagacg
agcggcgtgagcagcacactggcggacctgaagggagcgctccaggatctgagcggagag
ctgcgagaggagcgccagggctctcaggaactgacccagcagtttgcccgcgctaaggcc
tcctgggaggtggagaggacagagctcaagagcctcattacccagctggagagcaaggcg
ggcttggctgccctggccggcggggagaaggacctccaaggacctcccgacctgaaggtg
gcactgaagagggagcgtgaggagcaccagcacctcctggccgactcatatgccgccgtc
atggacctgaccaagcagctgcagatgggcgagaggaactggagccgtgagaagctggag
ctcatagagcatttcagtcaggagaggggccagtgggagcagaggctacagtgcaagatg
tctctgcactacaaaaccacccctgaaacaaaaactgcactggacgttgttacaaatgga
accaatttatcaaggaccaagtccatgttggagggtctgctggaggcctgtcctttccgt
caggaggtcaatggtacagccaatgaggagggagagaaggaccggcccagcacccaggcc
cctccccttcgaacccacacagacccgggtgacctcaccaggaagaactggaagtacctg
accaatgagatggctctgatggagcagggtgatgcccccttcaagacgtgggactgtccc
agctccccaaacagtttcctggacctggagagcatccagaggagctacacggcccccgac
aagactggcatccgcatctactacagcccccctaccatgcgccgtatggagagccggctg
gccaaggagaagcaggacaaacctcaagcccagcaaggccacctgtctcgggcttcaact
ccctcagacgctgtggccccggagggccaacctccctcctctgcctcctcctcttcgtcc
tatgaccagtggttgagctctctgtccaagcagcacagagaccttctagagaacagcagc
ggtggcgcgggggtggcgcccttccacggcctggagatctctgccaacctctcggacgac
atgaaggagatgaccaactgcgtgcgccaggccatccgctccagctctctggagaggaag
tgcagcaaggatgcgagcagccagacggtgggggtgtctagtcgctccacccagacggtc
cagtttgtgagcgtggggctgcagacggacgggctcgggtctcggggggtggggggcttc
cacaccaaatcctcctggtccccccggccctcgtcgtcgctggcctcggcccgctcgcgc
cacatctcctcatcactggataaggtgcacagccgcatcgacaggccctgttgctcaccc
aagtttggctcccccaagctacagcgacgcatttctgcctcctcctccaagctggacgga
ggaggattgtcctcggcttcatccagagaccgcagcctgtggaacctccaccagcggtcc
tcgacctccagcggctcggcctgggcccgttccacaaccaccagggacagccccgtgctc
agcggcctcaacgatggcctgtccagcctgttcagcgtggtggaacactccggcagcgta
gagtccctgtggaagagtgagccaggggccagcccagcccgccaggcagcagggaagccc
tctggccctggaccagacaccggagcccagaaatatggccctttccaggagtttttcagg
aacgtgtgtggccggaccggaacgaccatgcccgggggaggggagagggggcagagggag
gtgggggccatggatgagcccaagcctgagtgcctctccggggtttcgctggtggggaac
gacagcgtcaccaagatcgtcaacaagaggttcatgagacagatgcccagggaggagttg
ggggccactgctaacgatctcactgccaaggacctgaccttgagctccagcatggaggat
gcagcgtgtgattgcaactcccagtctcttacatcctgcttcgcccggccctcccgctca
gccacacgccattcactgggccactgcatgcaccgctctcaggagcctcccacggccacg
gaggagagagtggatgcaggcaatgagtga
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