Oncorhynchus keta (chum salmon): 118359750
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Entry
118359750 CDS
T09424
Name
(RefSeq) TBC1 domain family member 25-like isoform X1
KO
K24799
TBC1 domain family member 25
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118359750
Membrane trafficking [BR:
oke04131
]
Others
Specific organelles associated proteins
Auto phagosome
118359750
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DDE_3
Motif
Other DBs
NCBI-GeneID:
118359750
NCBI-ProteinID:
XP_035594321
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All DBs
Position
27:29893573..29906036
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AA seq
920 aa
AA seq
DB search
MATDEERGVVRVKVKKCEGMLPVEFRSFAVDPQITSLEVLQHILIRAFELNGKRNFGISY
LSRDRGGLEVYLSLLSDWDLDAAFVSAAKPYLQLKMDIKPAEDSPVMEDWDIISPKEVIC
SDQLPGDRRSLAAAALPFTQSLLSQMMGRTLSRVQQALSWSYGEEVKPFKPPLSDAEFHS
YLNGQGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGQERMDYMKRKTREYD
QLKGEWSARVSPEDLEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLTTFAITHP
QVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDGQLMSVKFQHLKLLLQY
SDPEFYCYLVSRGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPETEVELF
GPPLETDQTRMTSESGVEKRPAFTGEEEGEQKEKQRRRHMLRPSREEADGGRKIDMEEGE
REDREAIREGEGNFDMPYVGKEKAHNNAPVPPFEKQTSFGEFKYYNARNKDSFDFVERDP
PEGPVEMEASLHPVSSPLARQVTEDSEEDPGERAPLITDDDKSSSPETEERSSPNGQTAS
PVSPFPHGLPSWKNGSSPSPGSTPSPSSWRGALPDTPSPKYTSPILPNGRVESPEKATRG
FASFASVPNGTGANSPATPTGRSLVSSPLLTRSLLSSPILSFGRALPSLPVSTVNKSFPS
NLPSPCSRASSTAPNTPNSTKPENTTIKPCSLPPPQEFGKGNPFMLFLCLSILLEHRDHI
IKNSFDYNELAMHFDRLVRRHNLGRVLQRAKALFADYLQSEVWDSEEGDEVNNPNTHQKH
AVMVQEETLDWPAKSPDLNHIYNQWRELKTAVGGGHPSNIEEFKQFAAEEWDKLTVERSS
NLIDGYNKHLLAVTLHFENI
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgatgaggagaggggcgtagtgcgtgtcaaagtcaagaagtgtgaggggatg
ctgccagtggagtttcgctcatttgctgtggatcctcagataacatcacttgaggtgcta
cagcacatcctcatccgagcctttgagttaaatggcaaacgcaactttggaataagttac
ctatcccgggaccgtggaggtttggaagtgtatctttcgctcctgtctgactgggattta
gatgctgcatttgtcagtgcagctaaaccttatctacaactcaagatggacattaagcct
gccgaagacagtcccgttatggaagactgggacataataagccccaaagaagtgatttgt
tctgaccagcttcctggggataggaggtccttggcggctgctgccctccccttcacccag
tccctactgtcccagatgatgggtcgaacactgtccagagtacaacaggccttgagctgg
tcttatggggaggaggtgaagcctttcaagcccccattgagcgatgcggagttccacagt
tacctcaacggccagggccagctttcccgaccagaggaactgaggctacgcatctatcat
ggtggggtagagccttcactacgcaaggttgtgtggcgttacctcctgaacgtgtacccc
gatgggctgaccggtcaggagaggatggactacatgaagagaaagactagagagtacgac
cagctgaagggggagtggtcagctagggtcagtccagaggacctggagttcatcaggggc
aacgtactgaaggatgtcctgaggaccgacagggcccatccctattacgccggctccgag
gacagcccccacctcaccgctctcacggacctgcttaccacctttgccattacacatcca
caggtgtcgtactgccaaggcatgagtgacatcgcttctccgatacttgccgttatggac
aatgaggcacatgcattcatctgtttctgtggcatcatgaaacgcctagagggcaatttc
cgcccggatggccaactcatgtccgtcaagttccagcatctgaagctgctactgcagtac
tccgaccccgagttctactgttacttggtgtcccgcggagctgatgacctgttcttctgt
taccgctggctgctcttggaactcaaacgggagtttgccttcgacgatgccctgaggatg
ctggaggtcacctggagctccctgcctcctgatcctcccgaaacggaagtggagcttttt
gggccgcccctagagacagaccagaccaggatgacatctgagagtggtgttgaaaagagg
cctgctttcacaggtgaagaagaaggggagcagaaagagaagcagcggagacgacacatg
ttgaggccttcaagagaggaggcagacggcgggagaaagatcgacatggaggaaggagag
cgggaggacagagaagccataagagagggtgaggggaactttgacatgccttacgtagga
aaggagaaggcgcacaataatgcgcctgttcctccctttgagaagcagaccagttttggt
gagttcaaatactacaatgcacgcaacaaggacagctttgatttcgtggagagagaccca
ccagagggtcctgttgagatggaagcctccttgcaccctgtatcaagtccactggcccgg
caggtcaccgaggacagtgaggaggatccaggggagagggcacctcttataacggatgat
gacaagtcctccagcccagagacggaggagaggagctcccctaatggacaaacagcctct
ccggtctccccatttcctcatggtctgccaagctggaagaatggttcctctccgtctcca
ggctccactccctccccctcaagttggagaggtgccctcccagacaccccgtcaccaaag
tacacctcccccattttacccaatggaagggttgagtcgccagagaaagccacaagagga
tttgcttcctttgcctcggtgccaaatggaaccggagctaactctcccgctacccccaca
gggaggtccttggtttcctctcccctactgactagatcattgctctcctcccctattttg
tccttcgggagagctcttccttcgctgccggtcagcacagtgaacaagtcctttcccagt
aacctcccttctccttgcagcagagcctccagcactgcgcccaacactccaaattcaacc
aaaccagagaataccaccatcaaaccttgttccctgccaccgcctcaagagtttggtaaa
gggaatcctttcatgttgttcctgtgcctgtcaatcctgttggagcatcgagaccacatt
ataaagaacagctttgattacaacgagctggctatgcactttgaccgccttgttcggcga
cacaatctgggcagggtgctgcagcgcgccaaggccttgtttgcggactacctgcagagt
gaggtgtgggattcggaggaaggggatgaggtcaacaacccgaacacacaccagaagcac
gctgtaatggttcaagaagaaactctggactggccagcaaagagtccagatctgaatcac
atctataaccaatggcgagagctgaaaactgcagttggtggagggcacccctcaaatatt
gaagaattcaagcagtttgctgctgaagagtgggacaaattgacagtagaaaggagcagc
aatctgattgatggctacaataagcatttgttggcagttacattgcattttgaaaatatt
tag
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