Oncorhynchus keta (chum salmon): 118359761
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Entry
118359761 CDS
T09424
Name
(RefSeq) bile acid receptor-like isoform X1
KO
K08538
farnesoid X receptor beta
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118359761
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118359761
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118359761
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
118359761
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118359761
NCBI-ProteinID:
XP_035594345
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Position
27:complement(30072670..30083267)
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AA seq
492 aa
AA seq
DB search
MREWSESEMTMSAGGYLSASDGYGITEPLQYYDVLGDPLGYPFQEPDLQGLAFSQQQYSP
INVQFSVYGPPNSQHFHPPSTHPYSPHCLDTPCEPSPEPQCGSLGKGRGGGGLSMVKRTR
LGPGGRVRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGGCEMDM
YMRRKCQDCRLQKCRAVGMLAECLLTEVQCQSKRLRKGTKHRGGGPEEEENMGSRRVSST
SRLSGQVVSENLSVEQKHVLDRMVEAHRQYSAQDTTHCRVFEWTCTEVGGDRLTDMACPP
SQRLLQFAKSVPGFELLDCLDQTTLLSSSSVEVMFLLSAQQFTQNPAASSPALQPFNIST
HHWLKILESKENIHSGTGPVNSGVNEDLLGPVLNFFHSMAALGVTEAEYALLTATALLCS
ADEASLRAVVCVESLQELTMELLSRVCGARYGAQGPQGAQRFARLLGRLTELRTLRHNHL
TLLRQQLWDSQP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggagtgagtcggagatgaccatgtctgccggtggttacctctctgcctct
gatggatatggcatcaccgagcctctgcagtactacgatgtgctgggggaccctttgggc
taccctttccaggagccagacctacagggcctagccttcagccagcagcagtacagcccc
atcaatgtgcagttctctgtctacggaccgccgaactcccagcacttccacccaccttcc
acccacccctacagcccccactgcctggacactccctgcgagcccagcccggagccccag
tgtggaagcctggggaaggggcgaggtgggggaggtttgtccatggtcaagaggaccagg
ctgggtccaggaggaagggtgaggggccaggatgagctgtgtgtggtgtgtggggacaaa
gcctctggctaccactacaacgccctcacctgtgaaggctgcaaaggtttcttccgaagg
agtgtgacgaagaaagcagtgtaccggtgtaaaagtggcggaggctgtgagatggacatg
tacatgcggagaaagtgccaggactgccgcctgcagaaatgtcgtgctgtgggcatgctg
gctgaatgtctgctgacggaggtgcagtgccagtccaagaggctgaggaaggggaccaaa
cacagaggaggagggcctgaggaggaggagaacatggggagcaggagagtcagctccacc
agcaggctatcaggacaggtagtgtctgaaaatttgtcagtagaacagaagcatgtgctg
gacaggatggtggaggctcatcggcagtacagtgcgcaggacactacacactgtagggtg
tttgagtggacttgtacggaggttggtggagacagactaacagacatggcatgccctccc
tctcagaggctgctgcagttcgccaagagtgtacctggctttgagctcctggactgcttg
gaccagaccaccctcctctctagttcatctgtggaagtcatgtttctgctatcagctcag
cagttcacccagaacccagcagcctctagcccagcactacaacctttcaacatctcaact
catcattggctgaaaatcttagagtccaaggaaaacattcatagtgggaccggccctgta
aactcaggagtcaatgaggacttgctaggaccggtactcaacttcttccacagcatggct
gcattgggggtgacggaggctgaatatgccctgctcactgctacagcactgctatgctca
gcagacgaagcgtcgctgcgggcggtggtgtgtgtggagagcttacaggagctgaccatg
gagctgctgtccagggtgtgcggagcccggtatggagcccagggccctcagggagcccag
cgcttcgctcgcctgctggggagactcacagagctgcgcacgctacgacacaaccacctc
accctgctccgacagcagctctgggacagtcagccttga
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