Oncorhynchus keta (chum salmon): 118359784
Help
Entry
118359784 CDS
T09424
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118359784
03036 Chromosome and associated proteins [BR:
oke03036
]
118359784
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118359784
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118359784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
Stm1_N
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
118359784
NCBI-ProteinID:
XP_035594409
LinkDB
All DBs
Position
2:complement(71061733..71073566)
Genome browser
AA seq
769 aa
AA seq
DB search
MEGEVVSIETAQVEDLQDSGEGPELLQTVEAALMEGGVPPQVVTGNVEMMVMDTLDSTLD
PALLQMKTEVLEGGGTVTVTGGDEGQIITLQVVNMEGNMEQTSAALGLGQLQLVQVPVTT
ATVEELQASFVDASAGNTEAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAQDEL
QVTHGEEEEEEEAEPQVEDQTWSKDPDYQPTAGIRKGKKGKKSRLRYGEGERDMDVSVYD
FEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKS
HTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCDMAFVTSGELVRHRRYKHTF
EKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPY
ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFMEMGR
KCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQERHMIMHRRTHTGEKPYACNQ
CEKTFRQKQLLDMHFKRYHDPNFIPTAFVCSKCAKTFTRRNTMLRHAENCNGENTGDENG
TPPKKGRRGRKRKMRSRRDDDDDDTEPELDDIEEEEEELLAEIEVEQAPPVVPVPAPVGP
PAKRKRGRPPKAKPAPTAAIIRVEDETTGEVDDIIVKKEMKAEQASQEEEAVEDEVPAVE
VEHAEGEPANQVEESFQGEEVVQEVALSVTEAPPNGDLTPEMILSMMDR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaagtcgtttccattgagaccgctcaggttgaggatctccaggacagtggg
gagggacccgagctgctccagactgtagaggctgccctgatggaagggggtgtgccaccc
caagtggtgacagggaatgttgaaatgatggtgatggacaccctggactcaacccttgac
cctgccctgctacagatgaagactgaggtcctcgaagggggtggcacagtgacggtcacc
gggggagacgagggacagatcatcaccctgcaggtggtgaacatggaggggaacatggag
cagacaagtgcagcactggggcttggacagctgcagctggtgcaggttcctgtcactaca
gccaccgtggaagaactccaggccagctttgttgacgcctctgcaggcaataccgaggca
gagccagtgatctgccacaccctccctctgcccgagggcttccaggtggtgaaggtgggg
gcgaatggagaggtggagacagttgagcaagaagaactgcaggcagcccaggatgagctc
caggtgacccatggggaagaggaggaggaggaggaagctgagccccaagtagaggaccag
acctggtccaaagacccagattaccagccaactgctggcatccgcaaggggaagaagggc
aaaaagagccgcctgcgttacggggagggggaacgggacatggatgtgtctgtatacgac
tttgaggaggaacagcaggaggggatgctttctgaggtcaacgctgagaaggttgtgggc
aacatgaagccgcccaaacccaccaagataaagaagaaaggtgtgaagaagacgttccag
tgtgagctgtgtagctacacctgcccccggcgctctaacctggaccgccacatgaagagc
cacacagatgagaggccacacaaatgccacctgtgtgggagggccttcagaacagtcaca
ctgctgaggaaccacctcaacacacacacaggcactcgtcctcataaatgccaagattgt
gacatggcatttgtgaccagtggagagctggtgcgtcatcgtcgctacaaacacacattc
gagaaacccttcaagtgctccatgtgtgactacgctagtgtggaggtgagtaagctgaag
agacacatccgctcccatacaggcgagaggcccttccagtgcagtctgtgcagctacgcc
agccgagacacttacaaactgaagagacacatgaggacacactcgggtgagaagccatat
gagtgctacatctgccatgctcgtttcacgcagagcggcaccatgaagatgcacatcctg
cagaagcacacagagaatgtggccaaattccactgcccccactgtgacacagtcatcgct
cgcaagagcgacctgggtgtgcacttgcggaagcagcattcgttcatggagatgggcagg
aagtgtcgttactgtgacgctgtgttccacgagcgttacgcactcatccagcaccagaaa
tcccacaagaacgagaagcgcttcaagtgcgaccagtgtgactattgctgcagacaggag
cgtcacatgatcatgcacagacgcacacacacaggggagaagccgtacgcctgcaaccaa
tgtgaaaaaactttccggcagaagcagctgctggacatgcacttcaaacgttaccatgac
cccaacttcatccccactgccttcgtctgcagcaagtgtgccaagaccttcactcgcagg
aacaccatgctgcgtcacgcagagaactgtaatggagagaacaccggcgacgagaacggg
accccgcccaagaaaggccgccgcggcagaaagaggaagatgcgctccagacgggatgac
gatgatgatgacaccgagcctgagctggatgacattgaggaagaggaggaggagctgcta
gctgagattgaggtggagcaggcaccaccggttgtccctgtccctgcccctgttggcccg
ccagccaagaggaaacgtggaagacctccaaaggctaaacctgccccaacggcggcaatc
atccgtgtggaggatgagaccacaggcgaggtggatgacataatcgtgaagaaagagatg
aaggcagagcaggcgagccaggaggaagaagctgttgaggatgaggtgccagcagtagag
gtggagcatgctgaaggagagcctgccaatcaggtagaagagtcattccagggggaggag
gtggtgcaggaagtggcactgtctgtcacagaggctccacccaacggtgacctcactcct
gagatgattctcagtatgatggaccggtga
DBGET
integrated database retrieval system
