Oncorhynchus keta (chum salmon): 118359809
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Entry
118359809 CDS
T09424
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118359809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118359809
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118359809
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118359809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
zf-UBR
zf-RING_10
U-box
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
118359809
NCBI-ProteinID:
XP_035594481
LinkDB
All DBs
Position
27:complement(32614281..32616690)
Genome browser
AA seq
541 aa
AA seq
DB search
MPLSKPEKLLEHELSCPICLQLYTDPVYLPCGHNYCLACIQKATDVSGGEKSLPQCPECR
EEYGGTETLQRNFKLCGIIEGYRAVVPADRLKREPLKVRCDHCLDLETLAIKTCLKCEVS
LCARHLQHHTERESFRTHDLVEPQTELGQRGCAIHGRLLEYFCASDMTSLCANCFIEGTH
QNHDVLTFEAAEEEMRRALEIQSKAVANRLQLTETLLQRAAEDQGTSEAVGDKLLSKSVD
LMDSMAGLVSRYKDRMSLLLEKERGHQRESWQSGLGLLEEQQQQLMEAHQRTTEALTETE
KCLFINRFLLIEPQLREVVTGTVARVPNKVPLNPKRLQASLRMEDFRAEMARLLQSLHVL
LNPLELTFNLSTAHTSLLLSNDLQTVKYSGTKQAYAENPERFSTAPQVLCSQGFTSGEHI
WVVEVGDQSMWSVGLCYKSMPRRGDHSRLGHNPASWRLQWKNKKLTACHASSNVALAEMA
NQPLRVEVALDYEGGTLIFHSTKDRREHLHTFRAVFREAVYPAFSILSTREQSWITLQSG
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtctaaaccagagaagctgttagaacatgagctcagctgccctatctgcctg
cagctctacacggatcccgtgtatctgccctgtggccataactactgcctggcctgcatt
cagaaggctacagatgtcagcggtggagagaagagcctgcctcaatgccctgagtgtaga
gaagagtacggcggtacagagacactgcaaaggaacttcaagctctgcggcatcatagaa
ggctacagggccgttgtgccagcagaccgcctgaagagagagccgctgaaggtgcgctgt
gaccactgcctggacttagagacactggccatcaagacctgcctaaagtgtgaggtgtcc
ctgtgtgccaggcacctgcagcaccacactgagagggagtccttcaggacccatgacttg
gtggagccccagactgagctgggccagagaggttgtgccatccatggacgcctactggag
tacttctgcgccagcgacatgacctctctctgcgccaactgcttcattgagggcacccac
cagaatcatgatgtcctgacgttcgaggcagccgaggaggaaatgaggcgggccctggag
attcagagcaaggcggtggccaacaggctgcagctgaccgagaccctgctacagagggct
gctgaggaccagggcacctctgaggctgtgggagacaagctgctgtccaagtctgtggat
ttgatggacagcatggccggcctggtgagcaggtacaaggacaggatgagcctgctgctg
gaaaaggagagaggccatcagagggagagctggcagagtggcctggggcttctagaagaa
cagcagcagcagctgatggaggcccaccagcgcaccactgaggccctcacagagacagag
aagtgtctgttcatcaacaggttcctgctaattgagccccagctcagggaggtcgtgacg
ggtaccgtggccagagtgcccaacaaggtccctctgaaccccaagcggctccaggccagc
ctgaggatggaggacttcagggcagagatggctcggctcctccagtctctccacgtcctg
ctaaaccctctggagctgacctttaacctcagcacagcccacaccagcctgctgctctcc
aacgacctgcagacagtcaaatacagtggtaccaagcaggcctacgctgaaaacccagag
aggttcagtaccgcaccccaggtcctgtgctcccagggcttcaccagtggggagcacatc
tgggtggtggaggtgggcgaccagagcatgtggtcagtgggcttgtgctacaagagcatg
cccaggaggggtgaccacagccggctggggcataacccggcctcctggcgtttgcagtgg
aagaacaagaagctgacggcgtgccatgcctcctcaaacgtggcgctggcggagatggcc
aatcagccactgagggtggaggtggctctggactatgaggggggaacactgatcttccac
agcaccaaggaccgtcgggaacatctgcacacgttcagggctgtgttcagagaggctgtg
taccctgcgttcagcatcctctccaccagagaacagtcctggatcacgctacagagtgga
gtgtaa
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