KEGG   Oncorhynchus keta (chum salmon): 118359923
Entry
118359923         CDS       T09424                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oke01009]
    118359923
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oke03036]
    118359923
Enzymes [BR:oke01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     118359923
Protein phosphatases and associated proteins [BR:oke01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118359923
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118359923
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHDvar_NSD
Other DBs
NCBI-GeneID: 118359923
NCBI-ProteinID: XP_035594739
LinkDB
Position
27:complement(36817137..36850129)
AA seq 1543 aa
MTQPRPDEFKPPQECPVFEPSWEEFADPFAYINKIRPIAEKTGICKVRPPPDWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCSLKIPHVERKILDLYQLNKNV
ADEGGFDIVCRDRRWTAIALKMGFAPGKAVGSHLRSHYERLLYPYNLFQSGANLLAPELA
SKLMRLVSAPELDTFVQEPTLPVDTSDKECKPPDLTERQHFVEPTKSCCNSAHRAKRMRA
EVDALVAQIHTHLSEELLLKPSGCVKTEPGTEPCENNRPNLRRRMGSFVAKPEPDIPILV
KQEPIEPVSEADKNKSRYKKKPSLDAPPPAVSVVDLYMCLVCGSGSDEDRLLLCDGCDAS
YHTFCLIPPLHDIPKGDWRCPKCLAQECSKPQEAFGFEQAYRDYSLRAFGEMADSFKSDY
FNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIKNGRFKVSEKDEK
YLKCGWNLNNMAMMDPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHW
GEPKTWYGAPGFAAEQLEAVMKKLAPELFQIQPDLLHQLVTIMNPNTLMSYGVPIYRTNQ
CAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMALGRQCVDHYRLLHRYCVFSHDEMI
CQMASKANSLDVVLASAVQKDMKDMVREEQDLRDKVRKMGVLRCEQAEYDLLQDDERQCA
KCRTTCFLSAITCPCSPGQLVCLHHIQDLCSCPLTNYTLNYRFTLDDLYPMMNVVKQRAE
TYDEWASRVTETLEAKLDKKKSLSVFRSLINESESKMFPDNDLLRQLRLVTQDAEKCFSV
AQQLLNGKRQTRYRCGGGKTQSQLTVQELRSFVRQLYNIPCSLPQAPKLKDLLNCIEDFQ
QRSEKVLMDEATSTAVIQSLLDVSFDFDVELPELPILRERLEQARWLEGVQQTSAQPSTL
TLETMRRLIDQGVGLTPHPSVEKGMAHLQELLTVSEHWEEKTSILLKARPPPSIEVLSEA
AEKVVGIPAYLPNCLMLKDSISRAREWLQEAEAFQDGESIPLFDKLSDMVLRGQAIPVQL
DPLKHLEFLVTELQAWKESAAKTFLMKNSHFTLLEVLCPRFEVGAGSPKRKSKKAKDCSK
KKMVKLDCLSDVEKALLETEDTTSALATLGEVRLREMWALSSLRAANESKLLPTADCMDL
KVCVCQNPPMGAMLQCELCRDAFHSVCVRAPSDSRSTQAWLCPDCQRSEKPSLDKVLPLL
ASLQRIQVRLPEGDALHYLVERTVSWQQRARQVSASCGLPDLEESFRTSPSPVGKPPCLT
PEWNRTSHDQMVFYTEQRCIPLQGLSVELEELMVEGLLLQVSLPEITQLYHVLLNGLGTH
HTHGRTSQQEDDPSDCDKRKQCNSQGRSSPQKEDGLKKEVVNGAEKKAKRRLEREALETE
RRDKAKKLQNKRQKMNKEKNLERRAASTSSSPRSDFSQSDDSEEEMAMCPAEGCQQPEGD
EVDWVQCDGSCNQWFHQVCVGVTAELAEKEDYVCVGCTIIDGR
NT seq 4632 nt   +upstreamnt  +downstreamnt
atgacccagcctcggccggacgagttcaagccgcctcaggagtgcccagtcttcgaacca
agctgggaggaatttgccgatccttttgcttatataaataagatccgtccaattgcggaa
aaaacgggtatttgtaaggtccgcccgcctccggactggcagcctccatttgcatgtgat
gttgacagactgcacttcactcctcggatacagaggctaaatgaactggaggcacagacc
agagttaagcttaacttcttggaccagattgcaaagttctgggagttgcaggggtgttct
ctgaagattcctcatgtggaaaggaagatattggacctgtatcaactcaacaagaatgtt
gcagatgagggcggatttgatattgtgtgtcgcgatagacgttggacggcgattgcgctt
aagatgggctttgctcctggcaaggctgttggctctcacttacggtcacactatgagaga
cttctctacccctacaacctcttccagagcggagccaacctcctggcaccagagcttgcg
tccaagctgatgcgcttagtgtctgctcctgaacttgacacgtttgtccaggagccaacc
ctgccagttgacacgagtgacaaggagtgtaaaccccctgacctgaccgagaggcagcac
tttgttgagccaaccaagtcctgctgcaacagcgcccacagagcaaagcgaatgagagct
gaggtggatgcccttgtcgcacagatccacacacacttgtcagaagaactcctcttaaaa
ccatcgggttgtgtgaagacagaaccaggaactgaaccctgtgaaaacaacagaccaaat
ctgaggaggaggatgggctcttttgttgccaagcccgagccagacattcccattctagtg
aaacaagaacccatcgagccggtgagcgaggcagacaaaaacaagtctcgatataagaaa
aaacccagtcttgatgccccacctcctgcagtgagtgtagtggacctgtatatgtgtctg
gtgtgtggcagcgggagtgacgaggatcgtcttctgttgtgtgatggctgtgacgccagt
taccacaccttctgtctcataccccctctgcacgacatccccaaaggagactggaggtgc
cccaagtgcctggctcaagagtgcagcaaacctcaggaggcatttggctttgagcaggca
tacagggactactctttgcgggcttttggagaaatggcagactccttcaaatctgattac
ttcaacatgcccgttcatatggttcccacagagttggtggaaaaagagttctggcgcttg
gtgagcaccatcgaagaggacgtcacagtggagtacggagcagatatagcctccaaggag
tttgggagcggattccccatcaagaatggaagatttaaggtttcagaaaaggatgagaag
tacctgaagtgtggctggaacctgaacaacatggcgatgatggacccgtcagtgttgact
catgtcacagcagacatctgtgggatgactctaccttggctctatgtaggcatgtgcttc
tcctccttctgctggcacatcgaggaccactggagctactccatcaactacctgcactgg
ggggagccaaagacatggtatggagcacctggctttgctgcggaacagctggaggctgtg
atgaagaaactagctccagagctgtttcagattcagccagatctcctccaccagctggtc
accatcatgaaccctaacaccctcatgtcctacggggttccgatttacagaaccaatcag
tgtgctggtgagtttgtcatcactttccccagagcctatcacagtggttttaaccaaggt
tttaacttcgctgaggctgtcaacttctgtactgtggactggatggcattaggccgccaa
tgcgttgaccactacagactgctgcatcggtactgtgttttctcccacgacgagatgatc
tgccagatggcctccaaggccaacagtctggacgtggtcctggcgtcggctgtccagaag
gatatgaaggatatggtcagagaggaacaggacctacgagataaagtccgcaagatgggg
gtgttgcgttgtgagcaggcggagtacgatctcctgcaggatgatgagcggcagtgtgcc
aaatgtaggaccacctgtttcctgtctgccatcacctgcccctgcagccccggccagctg
gtctgtctccaccacatccaggacctctgctcctgccccctcaccaactacacactgaat
tatagatttacactggatgatctgtaccccatgatgaacgtggtaaagcagcgagctgag
acctacgacgagtgggcatcccgcgtgacggagactctggaggctaagttggacaagaaa
aaaagcttgtcagtcttccgctccctcattaacgaatcagagtccaagatgttccctgac
aatgacctcttgcgtcagctccgtttagtcacacaggatgcagagaagtgcttctcagtg
gcccagcagctactcaacggcaaaaggcagactaggtatcggtgtggtggggggaagacc
cagagccagctgaccgtgcaggagctgaggtcatttgtcaggcagctttacaacatccct
tgcagccttcctcaagcccccaaattaaaggatctcttgaattgcatcgaagacttccag
cagcgcagtgagaaagttctgatggatgaggccaccagcacagcggtgatccagagtctt
ctagatgttagctttgactttgatgtggagctgcctgaacttccaatactacgggagagg
ctggagcaagcccgttggctggagggtgtgcagcagaccagcgcccagccctccaccctc
accctggagaccatgcggaggctgatagaccagggcgtgggcctgacccctcacccctcc
gtggagaagggcatggctcatctgcaggagctactcacggtgtctgaacattgggaggaa
aagaccagcatcctcctcaaggccaggccccccccatctatagaagtcctctctgaagca
gctgagaaggtggtgggtatacctgcttacctccccaattgtctgatgctgaaggactcc
atcagtagggccagggaatggcttcaggaagcagaggcatttcaggatggagagtccatt
ccattgtttgacaagctctctgatatggttctacgaggacaagccatcccagtccagctg
gaccctctaaagcatctggagtttctggtaacagagctgcaggcctggaaagagtctgca
gctaaaaccttcctcatgaaaaactctcacttcactctgcttgaggttctgtgtccaaga
tttgaggttggagcagggtccccgaaaaggaagtcgaaaaaagctaaagactgcagtaag
aagaagatggtgaagctagactgtctcagtgatgtggaaaaagccctcttagagactgag
gacactacctcagctctggcaactctcggggaagtgcggttacgggagatgtgggccctc
tcctccctccgggcagctaacgagtccaagctcctccccacggcagactgcatggacctg
aaggtgtgtgtgtgtcagaatccccccatgggagccatgttacagtgtgagctctgccgg
gacgccttccacagcgtgtgtgtgagggctccctcagactcccgttcaacccaggcctgg
ctgtgtccagactgccaacgctcggagaagccctccctggacaaggtcctgcccttgctg
gcgtcactgcagcgtatccaggtgcgtctaccggaaggcgatgcgcttcactatttggtt
gagagaacagtcagctggcaacagcgagcgcgacaggtctctgcctcctgtggccttcca
gacctggaggagagctttagaacttcaccatctccggttggaaagccaccatgtttgact
ccagagtggaacaggacaagtcatgatcagatggtcttctacaccgagcaacgatgcatt
cctctgcagggtctgagtgtggagctggaggagctgatggtggaagggctcctgctgcag
gtgtctctgccagagatcacacagctctaccacgtgttactgaacgggctgggaacgcat
cacacccacggacgcacgtcacagcaagaggacgacccctcggactgtgacaaacgcaag
cagtgcaactctcagggaagaagctctccacaaaaagaggatggcctgaaaaaggaagta
gttaacggagcagagaagaaggccaagcgacgcctggagagggaggctctggagacagag
cgcagggacaaggccaagaagctccaaaacaagagacagaaaatgaacaaggagaagaac
ctggaacgtagggcagcctcgacctcctcatctcctcgttccgacttctcccagtcagac
gactctgaagaggagatggccatgtgtccagcagagggatgccagcagccagaaggagat
gaggtggactgggtccagtgtgacggcagctgtaaccagtggttccaccaggtctgtgtg
ggtgtgacagccgagttggctgagaaagaggactatgtgtgtgtcggctgtacaataatc
gatggccgctga

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