KEGG   Oncorhynchus keta (chum salmon): 118359924
Entry
118359924         CDS       T09424                                 
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5 isoform X1
  KO
K07374  tubulin alpha
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04145  Phagosome
oke04210  Apoptosis
oke04530  Tight junction
oke04540  Gap junction
oke04814  Motor proteins
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118359924 (tuba5)
  09143 Cell growth and death
   04210 Apoptosis
    118359924 (tuba5)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118359924 (tuba5)
   04540 Gap junction
    118359924 (tuba5)
  09142 Cell motility
   04814 Motor proteins
    118359924 (tuba5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118359924 (tuba5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118359924 (tuba5)
   03036 Chromosome and associated proteins [BR:oke03036]
    118359924 (tuba5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oke04812]
    118359924 (tuba5)
   04147 Exosome [BR:oke04147]
    118359924 (tuba5)
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     118359924 (tuba5)
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     118359924 (tuba5)
Cytoskeleton proteins [BR:oke04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    118359924 (tuba5)
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118359924 (tuba5)
  Exosomal proteins of other body fluids (saliva and urine)
   118359924 (tuba5)
  Exosomal proteins of colorectal cancer cells
   118359924 (tuba5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 118359924
NCBI-ProteinID: XP_035594742
LinkDB
Position
27:complement(36850242..36856414)
AA seq 452 aa
MRECISIHVGQAGVQTGNACWELFCLEHGVGPDGVFNEEDQGPNSRTDPFNTFFNTGSSG
RHVPRAIFVDLEPTVVDEVRTGMYRQLYHPEQLISGKEDAANNYARGHYTVGKEIIDGVL
ERVRKMTEQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST
AVVEPYNSILTTHTTLDHSDCAFIVDNEAIYDICRRNLDVERPSYTNLNRLIGQIVSSIT
ASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYAPIISAEKAYHEQLTISEITTACFEPA
NQMVKCDPRHGMYIACCMLYRGNVVPKDVNAAIQNIKTRRSIQFVDWCPTGFKVGINYQP
PTTVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS
EAREDMACLEKDYEELGRTSTESDDDEAGEEY
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgagagagtgtatctccatccacgtgggccaggcgggagttcagactggcaatgcatgc
tgggaactcttctgcttggaacacggtgtggggccagacggggtgttcaatgaagaggac
caggggcctaattcacggactgaccccttcaacaccttttttaacacaggaagttctggc
cgccatgttcccagggctatatttgtggacctggagccaacagtggtcgatgaggtcagg
acgggaatgtacaggcagctctaccatcctgagcagctcatctctggaaaggaggatgca
gccaataactacgcccgtggacactacaccgtgggtaaggagatcattgacggggttctg
gagcgtgtccgtaaaatgactgaacagtgcacagggctacaaggattcctcatcttccac
agcttcggaggaggcactggctctggtttcacctctctgctgatggagcgcctgtctgtt
gactacggtaagaagtccaagctggagtttgccatctacccagctccccaagtgtccaca
gctgtggtagagccatataattccattctgaccacccacaccaccctggatcactctgac
tgtgccttcatagtggacaatgaggccatctatgacatctgtcggcgcaaccttgatgtt
gagcgcccatcctacaccaacctcaacagattgatcggtcagatcgtttcctccatcact
gcctccctacgctttgatggtgccttgaatgttgacctcacagagttccaaaccaattta
gtcccattcccccgcattcatttccctctggtcacctacgcgcccattatctccgctgag
aaggcctaccatgagcagctgaccatctctgagatcaccactgcctgcttcgagccagcc
aatcagatggtcaagtgtgaccctcgccatggcatgtacatagcctgctgtatgctgtac
cgtggcaatgtggtgcccaaagatgtgaacgctgccattcaaaatatcaagaccagacgt
tccatccagtttgtggattggtgccccaccggtttcaaggttgggatcaactatcagccc
ccgactaccgtacctggaggtgatctagctaaagtccagagggctgtgtgcatgctgagc
aacaccactgccattgctgaagcctgggcccgtttggaccacaagtttgacctcatgtat
gccaaacgtgcctttgtgcactggtatgtaggtgagggcatggaggagggagagttctct
gaggccagagaagacatggcttgcctggagaaggattatgaagagctgggcagaacaagc
acagaatctgatgatgatgaagcgggtgaggaatattaa

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