Oncorhynchus keta (chum salmon): 118359924
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Entry
118359924 CDS
T09424
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5 isoform X1
KO
K07374
tubulin alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04145
Phagosome
oke04210
Apoptosis
oke04530
Tight junction
oke04540
Gap junction
oke04814
Motor proteins
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118359924 (tuba5)
09143 Cell growth and death
04210 Apoptosis
118359924 (tuba5)
09144 Cellular community - eukaryotes
04530 Tight junction
118359924 (tuba5)
04540 Gap junction
118359924 (tuba5)
09142 Cell motility
04814 Motor proteins
118359924 (tuba5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118359924 (tuba5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118359924 (tuba5)
03036 Chromosome and associated proteins [BR:
oke03036
]
118359924 (tuba5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118359924 (tuba5)
04147 Exosome [BR:
oke04147
]
118359924 (tuba5)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118359924 (tuba5)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
118359924 (tuba5)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
118359924 (tuba5)
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118359924 (tuba5)
Exosomal proteins of other body fluids (saliva and urine)
118359924 (tuba5)
Exosomal proteins of colorectal cancer cells
118359924 (tuba5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
118359924
NCBI-ProteinID:
XP_035594742
LinkDB
All DBs
Position
27:complement(36850242..36856414)
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISIHVGQAGVQTGNACWELFCLEHGVGPDGVFNEEDQGPNSRTDPFNTFFNTGSSG
RHVPRAIFVDLEPTVVDEVRTGMYRQLYHPEQLISGKEDAANNYARGHYTVGKEIIDGVL
ERVRKMTEQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST
AVVEPYNSILTTHTTLDHSDCAFIVDNEAIYDICRRNLDVERPSYTNLNRLIGQIVSSIT
ASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYAPIISAEKAYHEQLTISEITTACFEPA
NQMVKCDPRHGMYIACCMLYRGNVVPKDVNAAIQNIKTRRSIQFVDWCPTGFKVGINYQP
PTTVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS
EAREDMACLEKDYEELGRTSTESDDDEAGEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgtatctccatccacgtgggccaggcgggagttcagactggcaatgcatgc
tgggaactcttctgcttggaacacggtgtggggccagacggggtgttcaatgaagaggac
caggggcctaattcacggactgaccccttcaacaccttttttaacacaggaagttctggc
cgccatgttcccagggctatatttgtggacctggagccaacagtggtcgatgaggtcagg
acgggaatgtacaggcagctctaccatcctgagcagctcatctctggaaaggaggatgca
gccaataactacgcccgtggacactacaccgtgggtaaggagatcattgacggggttctg
gagcgtgtccgtaaaatgactgaacagtgcacagggctacaaggattcctcatcttccac
agcttcggaggaggcactggctctggtttcacctctctgctgatggagcgcctgtctgtt
gactacggtaagaagtccaagctggagtttgccatctacccagctccccaagtgtccaca
gctgtggtagagccatataattccattctgaccacccacaccaccctggatcactctgac
tgtgccttcatagtggacaatgaggccatctatgacatctgtcggcgcaaccttgatgtt
gagcgcccatcctacaccaacctcaacagattgatcggtcagatcgtttcctccatcact
gcctccctacgctttgatggtgccttgaatgttgacctcacagagttccaaaccaattta
gtcccattcccccgcattcatttccctctggtcacctacgcgcccattatctccgctgag
aaggcctaccatgagcagctgaccatctctgagatcaccactgcctgcttcgagccagcc
aatcagatggtcaagtgtgaccctcgccatggcatgtacatagcctgctgtatgctgtac
cgtggcaatgtggtgcccaaagatgtgaacgctgccattcaaaatatcaagaccagacgt
tccatccagtttgtggattggtgccccaccggtttcaaggttgggatcaactatcagccc
ccgactaccgtacctggaggtgatctagctaaagtccagagggctgtgtgcatgctgagc
aacaccactgccattgctgaagcctgggcccgtttggaccacaagtttgacctcatgtat
gccaaacgtgcctttgtgcactggtatgtaggtgagggcatggaggagggagagttctct
gaggccagagaagacatggcttgcctggagaaggattatgaagagctgggcagaacaagc
acagaatctgatgatgatgaagcgggtgaggaatattaa
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