Oncorhynchus keta (chum salmon): 118360276
Help
Entry
118360276 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118360276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
118360276
NCBI-ProteinID:
XP_052337887
LinkDB
All DBs
Position
27:21894267..22122926
Genome browser
AA seq
1630 aa
AA seq
DB search
MSKVIQKKNHWITQVTECAVSRDARGELNVELRGGAENGEFPYIGEVREDVLVYKNGQLS
EGELLLEVEGLSVSGLPLYDVLIVMNRCKGPVRLKTVRQGNKLNKDLKHYLSLRFQKSSP
DHELQQTIRANLYHHAMPCTTRPPRDGEVPGVDYNFLSVEDFLNLEQSGTLLEIGTFEGN
YYGTPKPPRQPVVGTVILSDAVLLNGPPGSQQSTPKRTKSYNDMQNAQVGPADYEDDDQA
TEMNNSFTGNPSDQDESCGGVLRPYPARENAPSYGLNNVASSTSDSGQQTHAQPQASPED
PLGPLPGNWEMAYTENGEVYFIDHNTKTTSWIDPRCLEKPLKPLEECEDDEGVHTEEPDN
ELELPAGWEKIDDPVYGVYYVDHINRKTQYENPIVEAKRRMQLEQQQPQPPEEWIEEHSS
AGAPLAVYASNHLETYRDPQDPPPLPPPPGGTKREWDRQTDSRTEGTFINTKLKKSRQTX
IGRQTDIDRDDEQDEFLQIKSLDIDRSTAVDGKMETGDVIVSVNDIIVLGYTHAQVVKIF
QSIPIGSMVDLALCRGYPLPFDPDDPNTSLVTSVAILDKEPIIVNGQQSYDSPSSHGSQT
GGPINGMREPRALSPSAEVASNGSHGYSSSDVVTLASSIAGQPELITVHMEKGDKGFGFT
IADSLTGGGQRVKQIVDYPRCRGLKESDILMEVNKRNVQNMTHNQVVDLLSKCPRGSEVT
MLVQRGVVPAKRSPKLVQQLERKNSQSSSQHSVCSHRSTHTDSPSHPSSNMPSEAVGPPP
AAPTHLLPGLPPLPTHDPGDGTMTLQKKPDPFKIWAQSRSMYESRQPDCQEQEIFLWRKD
TGFGFRILGGNEAGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLM
QQAAKQGHVNLTVRRKSSGYGVGKGEGDVPPSPASSHHSSTQAPSLTEGKRTPQGSQNSL
NTVSSGSGSTSGIGSGGGGGSGSAVVPAALQPYDMEIQRGENEGFGFVIVSSVSRPDAGT
TLAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILSVNGCSITNKSHSDIVNLIKEAGN
TVSLRIIPGDESSNASLLTNAEKIATITTTHTPQTATESRNNSKLKQAPPPPPPTQALPS
QDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAEDGAAGRNGKMRVGDEILEINSE
STKNMKHARAIELIKNGGRRARLVLKRGDGSVPEYDASHDGHSPTPGAQDSPQVRTLPPN
SRYHTSSESSYPPDLHKPSRHEDAGQGRDRDRMEHSGRHFNHHHHHTWNNNHTNSRQHSP
DSSTSGGNNKKSLGRKFKKSDSESGISKLLKTLRKDSSGKKAAAAAAEKERERSASSSTL
DQRYGRSRRGSLDRSPTRKRNTSPDRRRAKSMDRRAERAHRDCTPEREYDDGGFLSHAAT
PERPLYDRRLLREPQTPGRAYMEATTPERPNNGASSLSLSRDRTTDMKATTPERPNNGAS
SLSRSRGRTPDRGSLKNGNLLRDSSAETRDESYGINGTPERRYRSERDSSPNSSSSREEL
SYAAAPAPRLKDYYSTLKNNSSAHHNAGYNNAGLSNKAGQHHNNAVGRAPNQFPEPKRRF
YKESPKDLSI
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtaattcagaagaaaaaccactggatcacccaagttaccgagtgcgctgtg
agtcgggatgctcgcggggagctgaatgtggagctgcgcggcggtgcggagaatggagag
tttccatacatcggggaagttagagaggatgttttggtttataaaaacggacaactgtct
gagggggagttactgctggaagttgagggtttgtcggtgtctggattgccactctatgac
gtcttgattgtgatgaatcgttgcaagggtcccgtcaggctgaaaactgtccgacaaggt
aacaagctgaacaaggacttgaagcactacctgagcctgaggtttcagaagtcctccccc
gaccatgagctccaacagaccatcagagctaacctctaccaccatgctatgccttgtacg
acacgcccccctcgagacggggaggtccccggggttgattacaacttcctgtctgtggag
gacttcttgaaccttgagcagagtgggacactactggaaataggaacgtttgaaggtaac
tattatgggacgcctaagccgccgaggcagcccgtggttgggacagtgattctcagtgat
gctgtgctcctcaacggccctccaggctcccagcagtccactcccaagcgcaccaagtcc
tacaatgacatgcaaaacgcccaagtaggacctgctgactacgaggatgacgaccaggct
acagaaatgaacaacagttttacaggtaaccctagcgaccaggacgagagctgcggcggt
gttctacggccgtaccccgcgcgcgagaacgctccgtcctatggtctgaacaacgtggcc
tcatccacctcggacagtgggcagcagacacacgcccagccccaggcctccccagaagac
cccctaggacccctgccaggcaactgggagatggcttacaccgagaatggagaagtctac
tttatagaccacaacacaaagaccacatcgtggatcgaccctcgctgtctggagaaacct
ctaaaacctctggaagagtgtgaggatgatgaaggggtccatacggaggaaccggacaat
gagctagagctgcctgctggatgggagaagatagatgacccagtgtatggggtttactac
gtagatcacatcaacaggaagacccagtatgagaaccccatagtggaggctaaacgcagg
atgcagctggagcagcagcagccgcagcctcctgaagagtggatagaggaacactcctca
gctggtgctcccctggccgtctatgccagtaaccacctggagacataccgtgacccccag
gacccgcccccactgccccctcccccgggagggaccaaacgtgagtgggacagacagaca
gacagcagaactgaaggtaccttcatcaacaccaaactgaagaagagcagacagacatag
ataggtagacaaacagacatagatagggacgatgagcaggatgagttcctccagatcaag
agtcttgacatagataggtccacagctgtggatgggaagatggagacaggtgatgtcata
gtaagtgtgaatgacatcatcgtgcttggctacacccacgcccaggtggtgaagatcttc
cagtccatcccgatcggctccatggtggacctggccctgtgccgcggctaccctctgccc
tttgaccccgacgaccccaacaccagcctggtgacctccgtggccatcctggacaaggag
cccatcatcgtcaatggtcagcagagctatgactccccgtccagccacggcagccagacc
ggaggccccattaacgggatgagggagccgcgggccctcagcccctcggcggaggtggcg
tccaacggctcacacggctactcctccagcgacgtggtcaccctggcgtcgtccatcgcc
gggcagcccgagctgatcacagtgcacatggagaagggcgataagggctttgggttcaca
atcgctgacagcttgacgggtgggggtcagagggtgaagcagattgtggactacccccgc
tgcaggggcctgaaggagtcagacattctgatggaggtgaacaagaggaacgtccagaac
atgactcacaaccaggtggtggacctgctcagcaagtgtcccagaggcagcgaggtcacc
atgctggtgcagagaggagtggtgccagccaagaggagccccaagctggtgcagcagctg
gagaggaagaacagtcagagcagctcccagcacagtgtgtgcagccatcgcagcacccac
acagactctcccagccacccctcctccaacatgcccagtgaggccgtaggccctcctccg
gccgcccccactcacctgttgcctggcctgcctcccctgcccacccatgaccctggagat
ggtaccatgaccctccagaagaagccagaccccttcaagatctgggcccagtccaggagc
atgtatgagagcagacagccagattgccaggagcaggagatcttcctgtggcggaaggat
acaggttttgggttccgcatcctgggaggaaatgaggctggagagccgatctatattggg
cacatagtgaagtatggagcagcagatgaggacgggcgtctgcgttcgggggacgagctc
atctgtgtggacggcacggcggtggtgggcaagtctcaccagctggtggtgcagctgatg
cagcaggccgccaagcagggccacgtcaacctcactgtccgacgcaaaagctcaggatac
ggagtgggtaaaggggagggtgatgtgcccccatccccggcctcgtcgcaccacagcagc
acccaggccccctccctgaccgagggcaagcgaaccccccagggcagccagaactccctc
aacacagtcagctccggcagtggctccaccagtgggattggcagtgggggaggagggggc
tccggcagtgctgtggtacccgcagccctgcaaccatatgacatggagatccaacgcgga
gagaacgagggcttcggattcgtcattgtgtcgtcggtctccaggcctgatgccgggact
actttggctggaaatgcatgtgtggccatgccccacaaaatagggcgcatcatcgagggg
agccctgcggaccgctgtgggaaactgaaggtgggcgaccgcatcctgtctgtcaacggc
tgctccatcaccaacaagtcccactcggacattgtcaacctgatcaaggaggctgggaac
accgtctctctgaggatcattccgggtgacgagtcctccaacgcgtctctgttgaccaat
gctgagaagattgccaccatcaccaccacgcacacaccccaaactgccacagagtctcgg
aataactcaaagttgaaacaggctcctcctccacctcctccaacacaagctctgccctca
caggatgcagagttctactctgtggatctggagcgggacagtaaaggctttgggttcagc
ctgagagggggacgggagtacaacatggacctttatgtgttgaggctggctgaggacggg
gcagctggcaggaatggcaagatgagggtgggagatgagatcctggagatcaacagcgag
agcacaaagaacatgaagcacgcacgcgccatcgagctgatcaagaatggtggccggagg
gcacgcctggtcctcaagaggggcgatggatctgttcctgaatatgacgccagccatgac
gggcactctcccacacccggggcacaagactctccgcaagtgagaaccctgccaccaaac
agccgatatcacacctcatcggagtctagttatccaccagaccttcacaaaccatcacgc
catgaggatgctggacagggccgagacagggacaggatggagcactcgggccggcacttt
aaccaccaccaccatcacacctggaacaacaaccacaccaactccagacaacactccccg
gacagcagcaccagcggtgggaacaacaagaagagtcttggccgcaaattcaagaagtct
gactcggagagcggcatctcgaaactcttaaagactctgcgcaaggacagctctgggaag
aaggctgcagctgcagcggcggagaaagaacgagagcgctccgctagtagcagtactctg
gaccagagatatggtcgatcgcgccgcggctccctcgaccgctcgcccacccgtaaacgc
aacacttcccctgaccgacggcgggccaagtccatggaccgcagggcagagcgagcacac
cgggactgcacacctgagagggagtatgatgacggagggtttctcagtcatgcagccact
cctgaacgaccactctatgaccgtaggctcctgagggaaccacagaccccaggcagagcc
tacatggaggccaccaccccagaacgccccaacaacggggcctcctccctgtctctctcc
agggaccgcacgactgacatgaaggccaccaccccagaacgccccaacaatggggcctcc
tccctgtctcgctccaggggccgtacgcccgacagaggcagcctgaagaatggcaacctc
ctgagggactcgtcggccgagacgagggatgagagctacgggataaacggaacaccagag
agacgctacaggtcagagagagactcatctccaaacagcagctccagcagggaggagctg
agctacgctgcagcgcctgctcccagactgaaggattactacagcacactgaagaacaac
tcctccgctcaccacaacgccggctacaacaatgcaggacttagcaacaaggcaggacaa
caccacaacaacgcagtaggccgtgccccgaaccagttcccagagcctaagagaaggttt
tacaaagagagccccaaggacctcagcatctga
DBGET
integrated database retrieval system
