Oncorhynchus keta (chum salmon): 118360489
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Entry
118360489 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
oke04980
Cobalamin transport and metabolism
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118360489
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
118360489
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118360489
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118360489
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118360489
03029 Mitochondrial biogenesis [BR:
oke03029
]
118360489
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118360489
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
118360489
HMT complexes
COMPASS/SET1 complex
118360489
MLL-HCF complex
118360489
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
118360489
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118360489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
118360489
NCBI-ProteinID:
XP_052340360
LinkDB
All DBs
Position
28:2727800..2807901
Genome browser
AA seq
1874 aa
AA seq
DB search
MTSGTSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKP
KSPKNGPPPCPRLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVV
GWDIPITYGVLPPPRESHTAVVYTEKTSSKSRLVIYGGMSGCRLGDLWTLDIDTLTWNKP
SINGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMA
WESVLMDSLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPR
PPSRVQLVRANTSSLEVSWGAVPTADTYLLQLQKYDIPPASAATTPGVSPATSLPVNSPK
SPVTASAASPQGLPLQGITLVPSPTTTMPGSPLAAANARGPAILKVSAPHSTTGTSIVTV
RQANQXGKSPVTVTSLPAGVRMVVPAQGAQGTPMGSSPQMSGMAALAAAAAATQKIPPST
ATMQLPAGATMVKTVAMSPGSQTVKVASPVMVSNPATRMLKTAAAQVGTSGVVTPGTPSR
PIITVHKSGTVTVAQQHQVVTTVVGGVTKTITLVKSPLTMGGGGTLLSNLSNLGKVMSVV
QTKPGQTGAVTGQAGSSLQHIIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGTAGGKP
TILSYSGLPTTTKPGTHIIKTIPMSAIGQAGVTGSGLKSPITIITTKMMTPGTGTPGKII
SAMPRAGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPVTVSGVKPNVTTLVVKGT
TGVTTFGTVTGTVSSSLAGGSVATATTTLGTMTTLPGQVTVSAAQAGAQPTQVTLITTPS
GVDAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVTLVCSNPPCETHETGTTNTATTAS
ANMTGNGGVERVCSNPPCETHETGTTNTQTTASSNMGQVQQVCTNPPSETHDTGTTNTQT
TASCNMGSNQQQQGSNQQQQGSNQQQQGSNQQQQGSNQQQQGSNQQQQDLSPSSVSGTSS
VPGVLRPETLRTGTTYTSTTARSNMGSDQMGMTLSSSSSDNQSKSSSGGGGGGGGGSPLT
SPVCSNPPCETHETGPTEAGAGGGGGEETHETGTTTTSKQANSSMGIGQTTGTVQRVCSN
PPCETHETGTTNTPSQTTSNLTGTSTVQRVCSNPPCETHETGTTNTATTAQPGDSTQGDN
GTTEAPSSSSVTTESSAVVAAGRAVTTVTQSTPTPGPSVPEISSMSGSSEAMVAACIEGE
EAMQTDCLPEGTVRVVTLEEAAAAGIQVHVEGMEEQNQGEQEGLPAELMSEGDAGGQQTL
LVTGLTPEELAVTAAAEEVAQHAAAEEANAQAMAIQAVLQAAQHAVMNEGDGGQEGQHQT
TTIPIVLTQAELAALVHQQQQLQEAQALAQAAAAAAAAAAAAQHNQPTEGLAPADSLNDP
ASESNGQELAAAVTQAVARLAPTCTMVVANPAKTQPMMVATPAKTQPMMVATPAKTQPMM
VASPAKTQPMMVASPAKTQPMMVATPAKTQPMMVASPAKTQPMMVASPAKMQAAATLAEV
ANGIESAAGRQGAPPAVAKAPVKKDNQWFDVGIVKVTNTVVTHYYLPTDDQATVDDDSGA
IPDYSQMRKMDLQPGTAYKFRVAGINTCGRGNFSEVSAFKTCLPGFPGAPCAIKISKSPD
GAHLTWEPPSVTSGKIIEYSVYLAIQSAQSGEQTKPTTTTTPAQLAFMRVFCGPNPSCLV
QSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQEVGKDGVAAKPTAKRPGSSP
DMKATGPKKARSDQ
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggggacctctggctcagttctgcagccgcggtggaagcgggtgttgggttgg
tccggccctgtccctcggccccgacacggacatcgtgcagttgcaattaaagaattgatg
gtcgttttcgggggtggcaatgaaggaattgtggatgaactgcatgtgtataacacagcc
accaatcagtggttcattcctgctgtccgtggcgacatcccgcctggctgtgctgcgtat
gggttcgtgtgcgacggcactaggctgctggtgttcggagggatggtggaatatggcaaa
tacagcaacgatctgtatgaactgcaggccagtcgctgggagtggaagcgtctgaagccc
aagtctcctaagaacggtcctcctccctgtccccgcctgggacacagcttctccctggta
gggaacaaatgcttcctgttcggaggactggctaacgacagtgaggaccccaagaacaac
atccccagatacctgaacgatctgtacacgttggagctgcgtgccggctccagtgtggtg
ggctgggacatccccatcacctacggggtgttgcccccgcccagagagagccacaccgcc
gtcgtctacacagagaagacctctagcaagtcccgtctggtcatctatgggggtatgagc
ggctgtcgactgggggatttgtggacactagatatagacaccctgacatggaataagccg
tcgatcaacgggacagctcctcttccccgcagtctccactctgccacaaccatcaccaac
aagatgtacgtgttcggaggctgggttcccctggtgatggatgacgtcaaagtagcgaca
cacgagaaggagtggaagtgcaccaacacactggcctgtctcaacctagactcgatggcc
tgggagtcggtgctgatggattctctagaagataacatccccagggccagggccggtcac
tgctccgtggccatcaactcacgcctctacgtctggagcggacgggacggataccgcaag
gcctggaacaaccaggtgtgctgtaaggacctctggtacctggagacagagaagccccgc
cccccgtcgagggtgcagctggtgagagccaacaccagcagcctggaggtgagctggggg
gcggtaccaactgcagacacctacctgttacagctgcagaagtacgatatcccccccgcc
tcggccgccaccacgcccggcgtcagccccgcgacgtcactaccggtcaactcccccaag
agccctgtcacagcctctgcagcgtccccccagggcctgcctctccagggcataacgctg
gtcccctcccccaccaccacaatgcctgggagtccactggctgctgcaaatgcacgcggg
ccagctatcctgaaggtgtctgctccccattcaaccacaggcacctccatcgtcacggtg
aggcaggccaaccagnnggggaaatctcccgtaacggtgacatcacttcctgccggggtc
cgcatggtggtgccggcccagggtgcacagggaacgccaatgggcagcagccctcagatg
agtggcatggctgcgttggctgcagcggctgctgccacacagaagatcccgccctccacg
gccaccatgcagcttccagctggtgctactatggtcaagaccgtggccatgagccccggt
tcacagactgtcaaagtagcctcgcctgttatggttagtaacccagcaacccgcatgctg
aagactgctgcggctcaggtgggcacgtcaggtgttgtcacacccggaacgccttctcgc
cctatcatcaccgtgcacaagtctggcacggtgacggttgcccagcaacaccaggtggtt
accacggtagtgggaggagtcaccaagacaatcacccttgtcaagagtccccttactatg
gggggaggtggaacactgctgtctaacctgtccaacctggggaaggtgatgtccgtggtc
cagaccaagcctggtcagacaggagcggtgacgggacaggctggctccagcctccagcac
atcatacagacgaaaggtcccctcccggcgggcaccatcctgaagctggtgacctcagcg
gacggcaagcccaccaccatcatcactacgtcccaggccgggaccgcggggggcaagccc
accatcctatcctacagcggcttgcccaccaccaccaagcctggcacgcacatcatcaag
accatacctatgtctgccatcggacaagcaggagtgacaggaagtggtttgaagtccccc
attaccatcatcaccactaagatgatgacaccaggcaccgggacaccaggcaagatcatc
agcgcaatgcccagagctggggctggtcaacagggactcacacaggtggtgctgaagggt
gcccctggacagcccgggactattttacggaccgtccccatgggaggagtacgtctcgtc
tccccggttactgtttccggtgtcaaacctaacgtcaccacccttgttgtcaagggaacc
acaggtgtgacaacgtttggtacggtgactggtacagtgtcttcgagcctggcgggcgga
agtgttgccacggctaccaccaccttgggcaccatgaccactctgcctggacaggtcacc
gtctccgcagctcaggcgggagctcagcccactcaggtgaccctgatcacgacccccagt
ggtgtggatgctcagcctgtccacgacctcccggtctccatcctgtcctcccccacctcc
gccgacccctcgtccacccagcccgaggcaggcgacccagggacggtaaccctggtctgc
tcaaaccccccctgcgagacccacgagaccggcaccaccaatacagctaccacggcctcc
gctaacatgactggtaatggtggggtggagagggtgtgttcaaacccgccgtgcgaaacc
cacgagaccggcaccaccaacacccaaacgacagcgtcctccaacatgggccaggtacag
caggtgtgcaccaacccgccgtccgagacccacgatacaggtaccaccaacacccagacc
acagccagctgtaacatgggatccaaccagcaacaacaaggctccaaccagcaacaacaa
ggctccaaccagcaacaacaaggctccaaccagcaacaacaaggctccaaccagcaacaa
caaggctccaaccagcaacaacaagacctctccccctcgtctgtttctggtaccagctct
gtgcccggggtgctgcgaccggagactctgagaacagggaccacctacacctcgaccacc
gcacgttctaacatgggctctgaccagatggggatgacgctcagctcctcgtcctcagat
aaccagagtaagtcatccagtggaggaggaggaggaggaggaggaggatcccccctcacc
tctcctgtctgctccaatccaccttgtgaaacacacgagactggccccactgaggccgga
gctggaggaggaggaggagaagaaacacacgagactggcactaccactacgtcgaagcag
gccaactccagtatgggcatcgggcagactacagggacagtccagagggtgtgttccaat
cctccgtgtgagacacacgaaacagggacgaccaacaccccttctcagactacgtccaac
ctgacagggacgagcacggtccagagggtgtgttccaatcctccgtgtgagacacacgag
accggcaccacaaacacggctactacagcccagcctggtgactcaacacagggagacaac
ggaactacagaggctccctcgtcgtcctcggtaaccacagagtccagcgctgtggtggcg
gctggccgagcagttaccacggttacccagtccacacccacacctggaccctccgtacct
gagatctcgtcgatgtctgggtcgtctgaggcgatggtggcggcatgtatagagggagag
gaggccatgcagacggactgtctcccagagggcacagtgagggtcgtgaccctggaagag
gctgctgcagctgggatacaggtccatgtggagggcatggaggaacagaaccagggggag
caggagggcctgcctgcggagctgatgtctgaaggtgacgcggggggccagcagaccctg
ttggtgacgggtttaacccccgaggagctggctgttaccgctgcagccgaggaggtggca
caacacgctgctgctgaggaggctaacgcccaggccatggccatacaggctgtcctgcag
gccgcacagcacgctgtcatgaatgaaggagacggtggccaggagggccagcaccaaacc
accaccatccccattgtgttgactcaggctgagctggcagccctggtacatcaacaacaa
cagctgcaggaagcccaggctctggcccaggcggcggcggcggcggcggcagcggcagca
gcagcacagcacaaccagcccaccgagggcctggccccagcagacagcctgaacgacccg
gcgtcagagagtaacggccaggagctggctgcagcagtgacccaggcggtggcccggcta
gccccaacctgcaccatggtggtggcaaacccggctaagactcagcccatgatggtggca
accccagctaagactcagcccatgatggtggcaaccccagctaagactcagcccatgatg
gtggccagtccggctaagactcagcccatgatggtggccagtccggctaagactcagccc
atgatggtggcaaccccggctaagactcagcccatgatggtggccagtccggctaagact
cagcccatgatggtggccagcccggctaagatgcaggcagctgcgaccctggcagaggtg
gctaacggcatagagtctgctgcagggagacaaggagctcctcctgcggtggccaaagcc
ccggtgaagaaagacaaccagtggtttgatgttggcatcgtcaaggtgaccaacaccgtg
gtcacacactactacttgcccactgacgaccaagccactgtcgatgatgactctggggcg
atcccggactacagtcagatgaggaagatggacctccagccagggacggcctataaattc
agagtggccgggatcaacacctgtggtcgggggaacttctcagaggtctcggccttcaag
acgtgtctcccgggcttccccggagctccctgtgctatcaagatcagcaagagcccagac
ggagcccacctgacctgggagcctccgtcggtcacatctggtaagatcattgagtactcg
gtgtacctggccatccagagcgcccagagcggggagcagaccaagcccaccaccaccacc
accccagcccagctggctttcatgcgagtgttctgtgggcccaacccttcctgcctggta
cagtcgtccagcctctccaacgcacacatagactacaccaccaagcctgccatcatcttc
cgcatcgcagcccgcaacgagaaaggttacggccctgccacgcaggtcaggtggctccaa
gaggtaggtaaagatggtgttgcagctaaaccaactgctaagagaccaggctcctcacct
gacatgaaagctaccggtccaaagaaggccagatcagaccagtga
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integrated database retrieval system
