Oncorhynchus keta (chum salmon): 118360508
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Entry
118360508 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118360508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118360508
04090 CD molecules [BR:
oke04090
]
118360508
04091 Lectins [BR:
oke04091
]
118360508
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
L1 family
118360508
CD molecules [BR:
oke04090
]
Proteins
118360508
Lectins [BR:
oke04091
]
I-type lectins (Siglecs)
118360508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Bravo_FIGEY
Pur_ac_phosph_N
C2-set_3
Tissue_fac
V-set_CD47
CRLF2-like_D2
DUF4998
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-GeneID:
118360508
NCBI-ProteinID:
XP_052340891
LinkDB
All DBs
Position
28:13439168..13604531
Genome browser
AA seq
1282 aa
AA seq
DB search
MPHTQQHQVGSRGRRPHLLLHPILLLPLFSLLLSHAPQLSQGAIHIPSNYQIHEFKKPPV
ITTQPESITVFGAEDILLTCEASGNPPPDFRWTKDGEEFIPANDPGLSVSPGSGTFMKTG
VVSGPMSQYKGKYICYAENALGTAVSNEVQLITENTPALQKEQKVKKKVEEGESVVLKCN
PPFSTVPPVIHWMDERMHHIELNDRVTQGRDGNLYFSHVTVDDTRIDYTCNAQYLSARTI
LSKEPITLTVTTSNSVVRSRRPQMMRPSGTHSTYLALRGQSLELECIVQGLPTPTVQWVR
KDGQLSESRTSRHLFDRLLRISNISDSDGGEYQCSVNNSQGKVTHTYTVSVEAAPYWTKE
PVSQLYAPGETVKLDCQADGIPSPAVAWSINGKPITGKDPTPRRTMRDGAVILIDVVFTD
TAVYQCQAHNKHGTILVNTYIFVIELPPQILNADGQKYNFTEGQTAVLQCQTFGSPRPKV
TWERNSSASLLAEPRVNLLTNGNLQITNVSHGDEGLYTCSVSNTNLSINADLDVMNRTVI
LSPPGSLLVQPGKTAIFTCLAQVDPKLTPPHIQWKRSGQELFQSYAEDKYTFEGPDLIVA
NVQTEDEGVYTCEVITNLDRVEASGSIIIVDRPDPPTQLQVSDPKGRNVTLSWTAGDDHN
SPVIVFVVEFEDGDSKERGWEELKRVSGTHESVTISLQPYMSYRFRVISINNIGKSDPSM
PSDLHSTPPQAPDNNPENVRSESTDPDTLVITWEEMDRRVFNGPEFHYKVFWKRVVGDTT
WYSNVSTEPPYIVTEVGKFSAFQIKVQAANQKGEGPELDPVTGYSGEDIPLKAPQNVAMV
LLNSSAIRVTWEPVNEKTVRGHLLGYKIHLLRFGSRGHHQGRRAREPDTSVEVETGPKEE
KRVLGGLRPYSHYTLTVTVFNSKGEGPPSKTLSFETDEGAPGPPMSLRLDSHAGTEMTLH
WTPPAQPNGVLKGYLLQYQIVKSDSPMQVETIDDHKVTHLTLKQLDPHSRYRFYLRGRTS
AGDGEPITREGATTLDGAPPSNISLYVGEKSVNLSWVPGQRQRSVSFQVQYLNKQDGGKW
KQSEKLNSSASFYQLKGLTPGSQYRLRFTFSNNTFWETEITTKGAGVMDVQTGFATQANH
VGSKRHILLLLVLLILCFRMRAKGGKYSVKDKEEGQVDSEARPMKDETFGEYRSLESDNE
EKRTASQPSLCDESKLCISDDNLDGYNNGSIAVTEVTMEDSLVSQYSRPSEATPDPGTLQ
DSSPLNPNTTTNGLPNSAAILD
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacactcagcaacatcaggttggcagtagggggcgacgcccccatctcctcctc
caccctatcctcctcctccctctcttctctctcctcctatcccacgccccccagctcagc
caaggagccatacacataccttctaactaccaaatacatgaatttaagaaacccccagtg
atcaccacccagcctgagtccatcactgtgttcggtgctgaagacatccttctgacctgc
gaagcatcagggaaccctcctcccgatttccgctggactaaagatggggaagaatttatc
cctgccaatgacccgggcctgtcggtgtctccgggttctggaaccttcatgaaaaccggg
gtggtgtcaggccccatgagccaatacaagggcaaatacatctgctacgctgaaaacgca
ttaggaacggctgtgtctaacgaggtccagctcatcactgagaacaccccggccctgcag
aaagagcagaaggtgaagaagaaggtggaggaaggagagagtgtggtactgaaatgtaac
cctcccttcagcactgttcctcctgtcatccactggatggacgagcgaatgcatcacatt
gagctaaatgatcgtgtaacccagggccgggacgggaacctatacttctctcacgtcacc
gtcgatgacacccgtattgactacacctgtaacgcccagtacctcagcgctcgcaccatc
ctctccaaggaacccatcaccctgactgttacaacctctaactcagtggttcggagccga
aggccccagatgatgaggccctcggggacccacagcacttacctcgccctccggggccag
agcctggagctagagtgcatcgtccagggcctccctacccctacagtccagtgggtgagg
aaggacggtcagctgtcagagtcccgtacatccagacatctgtttgaccgtctgctgcgc
atcagcaacatctcagatagcgacgggggagagtaccagtgttcagtcaacaactcacag
ggcaaggtcacacacacctacaccgtcagcgtggaagcggctccatactggaccaaggag
ccagtaagccagctctatgccccaggagagacggtgaaactggactgtcaggctgatggc
atcccgtctcctgctgtcgcctggagcatcaacggaaaacccatcacaggcaaagaccca
acccctaggcgtactatgagagatggagctgtgattctgatagatgtggtcttcactgat
acagcagtctaccagtgtcaggcccacaacaaacacggaaccatcctagtcaatacctac
atcttcgtcatcgaactgcctcctcagatcctgaatgctgacggacagaagtacaacttc
acagagggacagacggctgtactgcagtgtcagaccttcggctctcccagacctaaagta
acatgggagaggaacagcagcgcttctctactggctgagcccagggttaacctgctgacc
aatggaaacctccagatcaccaacgtctcccacggcgacgagggcctgtacacctgctcc
gttagcaataccaacctgtcaatcaacgctgacctggatgtcatgaacaggacagtgatc
ctgtctcctcctgggtctctgcttgttcagcctggtaagacggccatctttacctgcctg
gcacaggtggaccccaaactgacccctccacacattcagtggaagaggagcggacaggaa
ctctttcagtcatacgccgaggacaagtacacatttgagggcccagacctgattgtggcc
aatgtgcagacagaagacgagggtgtttacacctgtgaggtcatcaccaacctggacagg
gttgaggccagcggttccatcattatagtcgaccgtccagacccccccacccagctccag
gtctctgaccctaagggccgcaatgtcaccctgagttggaccgcaggagatgaccacaac
agccctgtcatagtgtttgtggtggagtttgaagatggtgactctaaggagcggggttgg
gaggagctgaagagagtcagtggaactcatgagagcgtgaccatttctctgcaaccatac
atgtcctaccgcttccgggtcatctccatcaacaacatcgggaagagtgaccccagcatg
ccctctgaccttcacagcaccccacctcaagctccagacaataacccagagaatgtgagg
agtgagtctacagacccagacaccctggtcatcacatgggaggagatggacaggcgtgtg
tttaacggcccagagttccactacaaggtgttctggaaaagggtggtaggtgacacaacc
tggtactctaatgtctccactgagccaccgtacatcgtcactgaagtgggcaaattctcc
gcctttcaaatcaaagttcaggctgccaatcagaaaggagagggacctgagcttgaccct
gtgactggttactctggagaggacatccccctgaaggctcctcagaatgtggctatggtg
ctgctcaacagttcagccatcagggtgacatgggaaccagtgaacgaaaagactgtcaga
ggacacctgctgggatataagatccacctgctgaggtttggctccaggggccaccaccaa
ggccgtagggctagagagccagacaccagtgttgaggtggagacagggcccaaagaggag
aagagggtcctggggggactcagaccctactctcactacaccctcactgtcactgtgttc
aacagcaagggagagggccccccctccaagaccctgtcctttgaaactgacgagggagct
cctggccccccgatgtccttacgcctggacagccatgcaggcacagagatgaccctacac
tggacacctcctgcccaacccaacggagttctcaaaggatacctgctgcagtaccagatc
gtaaagagtgacagcccgatgcaggtggagacgatagacgatcacaaggtcactcacctg
accctgaagcagttggaccctcacagccgctaccgcttctacctgagggggcgcacctcg
gccggggacggagagcctatcaccagggagggagctaccacactggacggagctcctccg
tccaatatcagcttgtatgtaggagagaagtctgttaacctgagctgggtgccaggccag
agacagaggagtgtgagcttccaggtccagtacctcaacaagcaagacggtgggaagtgg
aagcagtctgagaagctgaactcgtctgcatcattctaccagctgaaaggtctgaccccg
gggtcacagtaccgcctcagattcaccttcagcaacaacaccttctgggagactgagatc
accacaaagggagcaggggtgatggatgtgcagacaggctttgctactcaggcaaaccac
gttgggtctaagcgccatatactgttgctgctggtgctgctcatcctctgctttagaatg
agggctaaagggggaaagtattcagtcaaagataaggaggagggtcaggtagactctgag
gcgcgccctatgaaggatgaaacattcggagagtacagatctcttgagagtgacaacgag
gagaagcggacagccagccagccgtctctgtgtgatgagagcaaactgtgtatcagtgac
gacaacctggatggctataacaacggtagcattgctgtcaccgaggtgaccatggaagac
tccctggtcagccagtacagccgacccagcgaagccaccccggacccgggcacactgcag
gacagctcccccctcaatcccaacaccaccaccaatggcctgcccaactcggctgccatt
ttagattag
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