Oncorhynchus keta (chum salmon): 118360589
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Entry
118360589 CDS
T09424
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118360589 (rtel1)
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118360589 (rtel1)
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118360589 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
118360589
NCBI-ProteinID:
XP_052338849
LinkDB
All DBs
Position
28:35568813..35623990
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AA seq
1215 aa
AA seq
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MPPLTLKGINVDFPFTPYECQKDYMSKVIECLQNKVNGVLESPTGTGKTLCLLCATLAWK
DYFKDTISARKIAEKMGGAELFPNTPLASWGTTATDGDTTTYYTDIPKIIYASRTHSQLT
QVINELKNTSYRPKVCVLGSREQLCINPEVMRQESNHLKVHMCRQKISTRSCVFYNNVEE
KSMDKDLVNSILDVEDLVKAGNKQRVCPYYLSRSLKQQAEIIFMPYNYLLDPKSRRAHNI
ELKGAVVIFDEAHNVEKMCEESTSFDLTPYDLASAIDAVDKLLAEQAKEAGRGDVSEDFN
MESINGGLKLDITTIAKIKQILLDLEAAIDSYDVPDKGITKPGSFIYELFQTAHLTFDTR
TPIFEALEQITGYLAGKPGIFMNTTGLQKLADIIQLVFCVDTQEGNKGANMPLNMQSSTT
KFKVHIHKDTSHHKKKQNTDVWSSSSSKKQGNVLSYWCFSPGFSMQELVRQGVRSIILTS
GTLSPLSSFTSEMQIPFPVCLENPHVIQHDQIFVSIIDCGPDSVQLSSAFDRRFVPENMA
SLGNTVVNLGRVVPHGLLVFFPSYSVMDKTLEFWRANGHADRIENIKPMFVEPRGKGTFT
EIIDGYYDKVNDSKSKGGSFFAVCRGKASEGLDFADTYGRGVIITGLPFPPRMDPRVILK
MQYLDEMCRKKTPGVQYLSGQNWYRQQASRAVNQAIGRVIRHRDDYGAIFLCDHRFKSTD
ARAQLPSWIRPYVRTYDNFGNVVRDVAQFFRVAQKHRPPPEKKPAKGSCGGAVHSADAHC
VSAGPCHSSESSTKGGFAQKAKVLDSHVPSLKRRRLNEHGGSEGNGMARLCIEYETEMEA
SRRRPAGLLDALEHSDSRYGDEVEALGGEERANRISTLSLQYDKRVDDELRGGKRKIKVV
QERKIPLSPNVSEEGKAGKAKSFLAEMKKSLSQVNFQRTMAALQTYKQMDDLDKLLAEAA
DLFTGDTNTYNLLRGFYQFIRPHHKKRFDEKCVELTGQGCGYKPDHSLSKEEKETLMQNG
AKPGKLTSVAVASDSSSSCSQLNASLLLNKGGHHLGIHGLTTEEHLPKNKVLTVDDPKCE
GQAPVQSAQKSQIYASFIADVKKSIGLEKSNQLFSAIQSYKKTDNYDSLVGIVVSLLTEK
NEDFNLLSTFALFIRPHHKKQYKEMLDALIGDSTGSSASSGISGQLIKGECTILKCLQER
ITCSNSGEVLVLSAQ
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccctgactttgaaagggataaatgtggatttccctttcaccccatacgaatgt
cagaaggattatatgagcaaggtgatcgagtgtctacaaaacaaggtaaatggggttctg
gagagtccgacaggcacgggcaaaaccctatgccttctgtgtgccacccttgcctggaag
gactacttcaaagacaccatttctgccaggaagatagcagaaaaaatgggaggagcagag
cttttccccaacacaccattggcatcgtgggggaccactgcaacagatggagacacaaca
acttattatactgatattccaaagatcatttatgcatccaggacacattctcagctgacc
caggtcattaatgagttaaagaacacttcctacaggcccaaagtgtgcgtgttaggatcc
agggagcagctttgtattaacccagaggtgatgcgtcaggagagcaaccaccttaaggtt
cacatgtgtaggcaaaagatatccaccaggtcttgcgtcttctacaacaatgttgaagag
aagagcatggataaagacctggtgaactccattttggatgttgaagatctggtgaaagct
ggcaacaagcaaagggtctgcccatactacctctcacgttccttgaaacagcaggcagaa
atcatattcatgccttacaactatctcctggacccaaagagtcgcagggcgcacaacatc
gagttgaaaggggcagtggtcattttcgacgaagcgcataacgtggaaaagatgtgtgag
gagtccacatcctttgacctcacgccctacgacctggcatcagctattgatgctgtggac
aagctgctagcggagcaggccaaagaggccgggcgaggagacgtctcagaggacttcaat
atggaatccataaatgggggtttgaaattggacataaccaccattgctaaaataaaacag
atacttctcgatctggaggcggccattgattcttacgacgtgccggacaaggggatcacc
aaacctggaagcttcatctacgagttgttccagacggctcacctcacatttgacacaagg
acgcccatctttgaagccctggagcagatcactggatatctggctggaaaaccaggcata
ttcatgaacacaactggattacagaaattggcggacataattcagctggtgttctgcgtt
gatacacaagagggcaacaaaggtgcaaacatgccgctcaacatgcaatccagcaccact
aaatttaaggtccatatccataaagacaccagccatcataagaaaaagcaaaatactgat
gtgtggtcttcatcttcctccaaaaaacaaggaaatgttctgagttactggtgcttctcg
cctgggttcagcatgcaggagctggtgaggcagggtgtgcgcagcatcatcctcaccagt
gggaccctctcccctctgtcctcattcacctccgaaatgcaaattccctttccagtatgc
ctggagaacccccatgtgattcagcatgatcagatctttgtcagcataattgactgcggt
ccagacagcgtgcagctcagctcagcatttgaccgcaggtttgtccctgaaaacatggca
tctttagggaacactgttgtgaatctgggccgtgttgtccctcacggtttgctggtgttc
ttcccctcttactctgtgatggacaagactctggagttctggagggcaaacgggcatgcc
gaccgcattgaaaacataaagcccatgtttgtggagcccaggggaaaggggacgttcacg
gagataattgatggttattatgacaaagtcaatgactcgaaatctaaagggggcagcttc
tttgcggtctgtcggggaaaggccagcgagggcctggattttgctgacacgtatggccga
ggggtcataatcactggcctcccgttcccgccccgcatggacccccgggtcattctgaag
atgcagtacctggacgagatgtgcaggaagaagacccccggggtgcagtacctgtcgggg
cagaactggtatagacagcaggcgtccagggcagtgaaccaagctattggaagagtcatt
cgccaccgtgatgactacggggctatcttcttgtgcgaccacaggttcaaaagcacagac
gcacgtgcccagctaccctcatggataaggccctacgtgcgcacttacgacaactttgga
aatgtggtccgtgacgtggcgcagttcttcagagttgcacagaaacataggcctcctcca
gagaagaagcctgcaaaggggagttgtggtggggcggtacactctgcagatgcccattgt
gtcagcgccggaccctgccactcctccgagagctccaccaagggaggtttcgcccagaag
gccaaagtactggactcccacgtgcccagtctgaagaggcgacggctgaatgagcatggc
ggcagtgaggggaacggcatggctaggctgtgcatcgaatacgaaacggagatggaggcg
agccggaggaggccggccggcctgctagacgccctggagcacagcgacagccgctatgga
gatgaagtcgaggccctagggggcgaggagagggctaatcgcatatccacgctgtctctt
cagtacgacaagcgcgtggatgacgaattgcgtggtggaaaacgaaaaatcaaagtggtc
caagaacggaaaatccctctgtctcctaatgtgtcagaggagggcaaagcggggaaagcc
aagtcgttcctggcggaaatgaaaaagtcgctgagtcaggtgaatttccagcgaacaatg
gcggccctgcagacgtacaaacagatggatgaccttgacaaactgctggctgaggcagcc
gacctcttcaccggggacaccaacacctacaacctgctccgaggattctaccagttcata
cgaccccaccacaagaagagatttgatgagaagtgtgtggagctgactggccagggctgt
ggctacaaacccgatcactcgctctccaaggaggagaaagaaacgctgatgcagaacggg
gccaagccgggaaagctgacgagtgttgctgttgcttctgattcaagctcctcctgcagt
cagctcaatgccagtctgctgcttaataaaggtggccatcaccttggaatccacggattg
actacagaggagcatttgccaaagaataaagtgcttacagttgatgatcctaaatgcgaa
ggccaagcaccagtccagtctgctcagaagagtcaaatctacgccagtttcatagcggat
gtgaaaaaatccattggacttgagaagtccaaccaactgttctcagctattcagagctat
aagaagaccgacaactatgatagcctggtgggcatagtagtgagtttgttaactgagaaa
aacgaagactttaacctccttagcacatttgccctgttcattcggcctcaccataagaaa
cagtacaaagagatgctggatgccttgataggtgactccacaggctcaagtgcttcctct
gggatttcaggccaactaataaaaggtgaatgtacaattctcaagtgccttcaagagaga
ataacttgtagcaattcaggagaagtccttgtattgtcagcacagtga
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