Oncorhynchus keta (chum salmon): 118360651
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Entry
118360651 CDS
T09424
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
oke04514
Cell adhesion molecule (CAM) interaction
oke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
118360651
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118360651
04517 IgSF CAM signaling
118360651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118360651
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118360651
04090 CD molecules [BR:
oke04090
]
118360651
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118360651
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oke00537
]
118360651
04091 Lectins [BR:
oke04091
]
118360651
Membrane trafficking [BR:
oke04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
118360651
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
NCAM1/2
118360651
CD molecules [BR:
oke04090
]
Proteins
118360651
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118360651
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oke00537
]
Others
118360651
Lectins [BR:
oke04091
]
I-type lectins (Siglecs)
118360651
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Ig_PDGFR_d4
Pur_ac_phosph_N
V-set_CD47
C2-set_2
Fn3_ROS1
C2-set_3
Motif
Other DBs
NCBI-GeneID:
118360651
NCBI-ProteinID:
XP_035596110
LinkDB
All DBs
Position
1:26942711..27056284
Genome browser
AA seq
1238 aa
AA seq
DB search
MLHAKDIILALLLVGSTVCLEVEITPTQGEISVGESKFFLCEIVGVAKEIDWYSPSGERI
EPNKPEITVTRNDESSSTLTLYKAGVDSAGTYKCLATNGDQSAEATVNVKFYQRITFKNA
PSPQEFNEGDNANIVCDVISSPPPTIIWKHKGAKIQMEKDVRFKILPNNHLQIRGIKKTD
EGSYTCEGRLMARGEIDLKIIRVIINVLPTIRVWQSEVNATAGVGQSAMLTCAADGYPEP
MVTWARAGVLLESGDKYSFNKDGSEMTIMEVAKLDEGEYTCIAKNKAGESEQEVSLRVFV
KPKITFLLNQSTSEMAEQVTLTCEASGDPTPTINWSFGLRPFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYAKFTDAGQYLCSARNAIGVDSQPAYLEVRYAPKI
QGSVTVYTWEGNAANISCEVLAHPSDVSMLWLRDGFQLPNANITKAKVFQSPTASYLEVT
PESENDFGSYNCTAANEMGTESKEFLLIQADVPSAPSLGGVEPFSSSARMEFQEPDATGG
VPVLRYRAEWKTVGRGSWVQMVYDVQGGALSEITITGLKPETNYEVKMSAINGKGEGETS
PVVVFKTEPVRYSYASEPEPPKLEGTLQTKGNSLKVNWLKQDDGGSPITHYLVRYKPKHQ
ADWKPEIRLPSGSEYVVLSGLEWNTEYDVFVVAENQQGKSQPGTLTIRTSPEPAAIPDID
GESALSMGIMAGILILAFVLLLLAVDVTCYFTNKCGLIMCLCCKPGSGAKGHNLEQGKAA
FIKDESKEPIVEVRTEDECTANHNAGGPTEPSETTPLTEPELAAHTAALALDTLSSVATI
SDTANTTYDPAQDSPSSESTALTCSLSALATDPLPAPAPAPTPESNTAPPTPFISTSDIT
ARVAPLLDLLGDSSPRAEDNMYATAVSATDCPTSPKNSPIPIPPRRRNSNRPAPSPPTPK
SPTPTHSTTMAPRKSAPESPSLAPSTASPSPNTRKAAPIAPDSPSPASMAFTFPASDTST
SKLAPTTTYVPSAPTTAFNADITAAIVHEDTIKCAPVFPNILTSIPVPTSAPTTPAPNAS
TAPTFATPAAPTVTITLASTIYDTPTPTLTPHMPTTTAPQAPEIELELTDGVETECPSMP
PAEATRFQSSPIPSPAPGLSSSSSPLANGNGFGADLQASSPPALEELDSPAKAAPLNDEK
IFGGEKSKAEEAEVKTALSEVTTEHNNVTQRNASDNKA
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgctccacgcaaaggatatcatcctagccttgcttctcgtgggctctacagtttgtctg
gaagtggagatcacccccacccagggagagatcagtgtcggagagtccaagttctttctg
tgtgaaattgttggggtagcaaaggagattgactggtattccccgagcggggagaggata
gagcccaacaaaccagagatcaccgtaacccgaaacgacgagtcttcgtccacgctcacg
ctctacaaggccggggtggacagcgctgggacctacaagtgtctggccaccaacggagac
cagtcagcagaagccaccgtcaacgtcaagttctaccaaaggatcaccttcaagaacgcc
ccctccccccaagagttcaatgaaggggacaacgccaacattgtctgtgacgtcatcagc
tcccctccccccaccatcatctggaaacacaaaggagcgaagattcagatggagaaggat
gtccgctttaagatcctgcccaacaaccacctgcagatccgaggcatcaaaaagacagac
gaggggtcgtacacctgtgagggccgcctcatggcccggggagaaattgacctcaagatc
attagggtcatcatcaacgtgctccctaccatccgggtgtggcagtctgaggtgaatgcc
acagcaggcgtgggccagtctgccatgttgacctgtgctgctgatggatacccagagccc
atggtgacctgggcacgagccggtgttcttctggagtcaggagacaagtacagctttaat
aaggacggttcagagatgaccatcatggaggtagccaagctggatgagggagagtacacc
tgcatcgctaagaacaaggctggggagagcgaacaggaagtcagccttagagtgtttgtg
aaacctaagatcaccttcctgctgaaccagagcacgtctgagatggctgagcaggtgact
ctgacctgtgaggcgtcaggggaccccacccccaccatcaactggagctttggcctgcgc
cccttcactgagggagagcaggcacatctaaacaggatctatcaggcctcttggactcgg
cccgaacaacacaagagtctggatgggaacgtcgtagtgaggagtgatgctcgtgtgtcc
tccctcacactgaagtacgccaagttcaccgacgctggccagtacctctgctctgcacgc
aacgccatcggagtggattctcaacccgcctacctggaagtccgctatgctcctaagatc
cagggctcagtgacagtgtatacctgggaggggaatgcagctaacatcagctgtgaggtc
ctggcccaccccagtgacgtgtccatgctctggctgagggacgggtttcagcttcccaac
gctaacatcaccaaagccaaggttttccagagccccacagccagctacctggaggtcact
ccagagtctgagaatgacttcgggagctacaactgtactgctgccaatgagatgggcaca
gaatccaaggagtttctcctcattcaggctgatgtcccgtcagccccgtccctcgggggg
gtggagccgttctccagctcagccaggatggagttccaggagcctgatgccacagggggt
gtacccgtcctccggtaccgggctgaatggaagactgtgggcaggggcagctgggtgcag
atggtctatgatgtccaaggaggagctctgagtgaaataaccatcacaggcctgaagcct
gagaccaactatgaggtgaagatgtcagccatcaatggcaagggagagggtgaaactagc
cccgttgtggtcttcaagacagagcctgtccgttattcttacgcaagtgaacctgaaccg
cctaagctggagggaacactccaaacaaaaggcaactccctcaaagtcaactggctcaag
caggacgatggaggctcacccatcacacactacctagtccgctataaaccaaagcatcag
gccgactggaagccagagatccggctgcccagtggcagtgagtatgtggttctgagcgga
ctggagtggaacacggagtacgatgtgtttgtggtggcagagaaccagcaggggaagtcc
caacctggaaccctgaccatcagaacctctccagaacccgctgccatcccagatatagac
ggggagtctgccctctccatgggcatcatggcagggatcctcatcttggccttcgtcctg
ctgctcctggctgtggacgtcacctgctacttcaccaacaagtgtggcctcatcatgtgt
ctgtgttgcaagccaggcagcggagccaagggacacaacctagaacagggcaaggctgca
ttcataaaggatgagtccaaagaaccgatagtggaggtgaggacagaggatgagtgcaca
gccaatcacaacgcaggaggacccacggaacccagtgagaccacaccccttacagagcca
gagctggccgctcacactgctgccctggctctggataccctctcgtctgtagccaccatc
tctgacacagccaacacaacctatgaccccgcccaggacagcccctctagtgagagcacc
gctctcacttgtagcctgtctgccctcgctactgaccccctgcctgcccccgccccggca
cccactccagagtccaacacagcccccccaacccccttcatctccacctctgacatcaca
gctagagtagcccccctgttagaccttctaggagacagctctcctagagcagaggacaac
atgtatgccactgctgttagtgccacagattgccctacatctcctaaaaattcccctatt
ccaataccacctaggcgtcgaaactctaacagacctgctccttctcctcccactcccaag
agccccacacctacccactccaccaccatggcccccaggaaatctgccccggaaagtccc
tctcttgccccctccactgcctctcctagtccaaacaccaggaaagctgctcctattgcc
ccagacagcccctctcctgcttctatggcattcactttcccagcctctgacacctccact
tctaaacttgctcccactaccacatatgtccctagtgctcctactactgccttcaatgct
gacataactgctgctatcgttcacgaggacacaatcaaatgtgcccctgttttcccaaac
attctcactagtattccagttcccacaagtgcccccaccacacctgcccctaatgcttcc
actgccccgacctttgccacacctgctgcccccacggtcactatcacactggcttctact
atatacgacaccccaacacccaccctgaccccccacatgcccaccaccacagcaccccaa
gccccagagatagagttagagttgaccgatggggtggagactgagtgcccctccatgccc
ccagcagaggccactaggtttcagagtagtcccattccctcccctgcccctggcctttcc
tcatcctcctcccccctggctaacggaaacgggtttggggcagacctccaggcctcaagc
cccccagctctggaggagttagacagtccggccaaggctgctccactcaacgacgagaag
atatttggaggtgagaaaagtaaagcggaggaggctgaggtgaagacagccctgtcagag
gtgaccacagaacacaacaatgtcacacagagaaacgccagcgacaacaaagcatga
DBGET
integrated database retrieval system
