Oncorhynchus keta (chum salmon): 118360658
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Entry
118360658 CDS
T09424
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118360658
04812 Cytoskeleton proteins [BR:
oke04812
]
118360658
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
118360658
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
118360658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_8
LRR_4
LRR_NXF1-5
LRR_14
LRR_LRWD1
LRR_R13L1-DRL21
DBC1
Motif
Other DBs
NCBI-GeneID:
118360658
NCBI-ProteinID:
XP_052340286
LinkDB
All DBs
Position
2:77506755..77565244
Genome browser
AA seq
682 aa
AA seq
DB search
MRRRKTVGGSSLLHYSSNPVNLEEELRWRCLEECPLLEGMGRLRLLNFQHNLITHIHNLS
HLRHLAFLDLYDNHISQMSGISQSAYAGIQRICSLDNLTKLDILDLHGNQISQIGNLSHL
SELRVLNLAGNCISRVDNLQGLDSLTEINLRRNCISTVVRERREVDQLPCLQRLFLSCNS
ITSFDELACLGESCSLSELTLDGNPVALETWYMQAALRCVLQLRQLDMKRVTEEERRMAC
VTARKEDEKKRESHKQAMHKSPAHVAPQQFYTQLGLKSQDSSVTSKEKRRLAIRNAALQW
EGVRACLEHPAQNGAKEEVSPEASPAHSPAQTNGLALEPSPDEQLRRVSPVSALDRPTGG
SETRIRSTSRPNSPRDPKLLEAGGASLQSLSLSDSHLAELDGETLRLFGLGALEALERGW
GVQTAGAVTVIAFRYIHFDAIVPTLPRIRVKFPNLSHLIFLETNVCRLPQLAALAQVRRL
DQLTIHPEGNPVVSLSLWRSFLIYRLHHFNLHKINNLEVTMNEVISAERLFGTLGHIAAT
ETPRCRLLVLLEESRKRQLQFLLEGRGRRAGLSPEELRDNGKLLGEGLSRALFNYPSRDC
CSVGAESPEEGAMESSSERHAVMEQYIQAQVQRASDTNLKGESLHKLWPSMFMEMVRDYV
LEMRDRPTFRQACLNRLSTQGK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagaaaaactgtcgggggaagttctcttctgcactattcaagcaatccagta
aatttggaggaggagttaagatggcgttgtctggaggagtgtcccctgctggagggcatg
ggtaggctgcggctgcttaactttcagcacaacctcatcacgcacatccacaatctgtct
catctgcggcacctggccttcctagacctgtatgacaaccacatctcccagatgtctggc
atctctcagagtgcttatgctggaatccagaggatatgcagtctggataacctgactaaa
ctagatattctggacttgcatggcaatcagatctcccagatagggaacctctcccacctg
tctgagctgcgcgtgttgaacttggcagggaactgcatctccagggtggacaacctgcag
ggcctggactcactgaccgagatcaacctgagacgcaactgcatctccactgtggtgagg
gagaggagagaggtagaccagctgccctgcctccagcgcctctttctcagctgcaacagc
atcaccagttttgatgagctagcctgcctgggagagtcgtgctccctttctgagctcacc
ctggatgggaacccagtagccctggagacatggtacatgcaggccgccctgcgctgtgtg
cttcaactcagacagctggacatgaaacgtgtcacggaggaggagagacgtatggcctgc
gtcacggcccggaaggaggatgagaagaagagggagagtcacaagcaggccatgcacaag
agtcctgcacatgttgcgcctcagcagttctacactcaacttggactcaagtctcaggac
tcctcagtgacaagcaaggagaagcggcgtctggccatccgtaatgcagcactgcagtgg
gagggggtcagggcctgcctggagcacccggctcagaacggagccaaggaggaagtcagc
cctgaagcaagccccgcccacagtcccgcccagaccaatggccttgcactggaaccttct
ccggatgagcagctcagacgggtgagtccggtgtcggctctggacaggccaacagggggc
agtgagacccggatacgctccaccagtcgccccaacagtcctcgtgaccccaagcttctt
gaggcagggggtgccagcctgcagagcctctccctgtcagacagccacctggcggagctg
gatggggaaaccctgcgcctgttcggcctcggggccctggaggccctggagagaggctgg
ggggtccagactgcaggagccgtcactgtcatagccttccgctacatccactttgatgcg
atcgtgccaacactgccacgcataagggtcaagttccccaacctatctcacctgattttc
ctggagaccaacgtctgccgtcttccccagctggctgctctggcccaggtgagacgtctg
gaccagctgaccatccacccagaggggaaccctgtagtcagcctttccctgtggagatcc
ttcctcatctaccgcctgcaccacttcaacctgcacaagatcaacaacctggaggtgacc
atgaatgaagtgatctctgcagagcgtctgtttgggacgctgggtcatatcgctgccacc
gagacaccacgctgccgcctgctagtactgctggaggagtccaggaagcgtcagctgcag
tttctgttagaggggcgtgggcgccgtgcaggcttgagcccagaggagctgcgtgacaac
ggcaagctgctgggagagggcctgagcagagccctgttcaactaccccagtagagactgc
tgcagtgtgggagcggagagcccagaggagggtgctatggagtcgtcatcggagcgccac
gccgtgatggaacagtacatacaggctcaggtccagagggcatctgacaccaacctgaag
ggggagtccctccacaaactgtggccctccatgttcatggagatggtgagagactatgtg
ctggagatgagggaccgaccaaccttccgtcaggcctgcctcaacaggctctccacacag
ggaaagtga
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