Oncorhynchus keta (chum salmon): 118360733
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Entry
118360733 CDS
T09424
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04020
Calcium signaling pathway
oke04148
Efferocytosis
oke04218
Cellular senescence
oke04310
Wnt signaling pathway
oke04370
VEGF signaling pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118360733 (nfatc2a)
04370 VEGF signaling pathway
118360733 (nfatc2a)
04020 Calcium signaling pathway
118360733 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118360733 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
118360733 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118360733 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118360733 (nfatc2a)
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118360733 (nfatc2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
118360733
NCBI-ProteinID:
XP_035595973
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All DBs
Position
28:complement(16895386..16939073)
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AA seq
910 aa
AA seq
DB search
MSSFYDRKDPSELGLEEELSQVNCQDELEFDYLFEYEPPCNNFPGEDQADEPNLSSLRVL
SVASHLAYPLEETSPYDIKCSEHNPESLSGYEHLEAKNYLDHTRPGGIALSPRIEITPSR
ELYSHGRDSLQNHPLNISPRPTLTVPGHDSLVYREPQCLSPASSNSSTSWHSESYSPWAS
PCVSPSSGQTGAGDLCPRFQNIHTASPRTSPGTSPHTEEGCLGPRSPSPSIRPGSRSTSP
QGKRTYDMYRNPSLVTGIRSRSPSPHGGHGEHSQQNASAHYGTPNSMAKAMNGYGTVQPG
LVPTKVVKTANQAYALYPENHREVNYLVSCEQDVKSKTGAESFFVIPPIWTKQLVPNLCS
IPFSSLPPLEWPVPSHTDQYELHVDVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHGY
RGKEPLGLQIFIGTADDRILKPHAFYQVHRITGKTVTTTSYEKIINSTKVLEIPLEPKNN
MKAIIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPQPNGQHISLQVSSHPIE
CSQRSAHELPMVEKQDMDSCSVLGGQQMILTGQNFSSDSKVIFMEKTHDGQQIWEMETTV
DKDKCQPSLLFVEIPSYRDPSICHPAKVNFYVINGKRKRSQPQHFTFTPLAVPSIKTEPV
DDYPFTMPQILGVSPQSYYHHSPVGIIHPDNSLVSSMASCQQVRSGLPTPGPEPRFQQQS
PAIVYTRGGKSLSGSPEGLYQQTGGMGMMPDPHHSVLVHTGSPVQQQHGGGQGQHPSIIQ
FSPTNQHLLRGGDPPPLQPDNQQHIIYCDGFPQQAGAQAHSPVPAHSPQHYPTTVIQQQP
YVPKVVLKGRSSPGGMEAQRCAPGEEQRASLPGGQVTVKEENLDQMYLDDGELNEIIRKD
LTGVQARGQT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgttttacgacagaaaagaccctagtgagttagggctggaagaggaactgagt
caagtaaactgccaagatgagttggagtttgattacctgtttgaatatgaaccaccttgc
aacaactttcccggggaagatcaagcagatgagccaaatctctcctcactgagagtcctc
agtgttgcatctcatctggcataccccctggaggagacttccccctacgacatcaagtgc
agcgagcacaacccagagagcctttctggttatgaacacctggaggctaaaaactacctg
gaccacaccaggcctgggggtatcgccctgagccccaggatcgagatcactccgtcacgt
gagctctacagccatggacgagactccctacagaaccaccctctgaacatcagtccccgg
cccactctgaccgtccctggccacgacagcctggtataccgagagccccagtgcctgagc
ccagccagcagcaactcctccaccagctggcactcggagagctattccccctgggcctcc
ccttgcgtgtccccaagtagtggccagaccggggccggagacctctgcccccgcttccag
aacatccacaccgcctccccccgcacatccccaggtacttccccccatactgaggagggc
tgtctcggcccccgttcgccctccccatccattaggccaggatcccgctccacctcgcca
cagggcaagcgcacctacgacatgtacaggaatcccagcctggtcactgggatccgttcc
cgcagtccctccccacacgggggccacggggagcactcccaacagaatgcaagtgcccat
tacgggacccccaacagtatggctaaggccatgaacggctacggcactgtccagcctggt
ctggtccccaccaaggtagtgaagacggccaaccaggcgtacgccctctacccagagaac
cacagggaggtcaactacctggtgtcctgtgagcaagacgttaagagtaaaactggggcg
gagtccttctttgtgatccctcccatctggaccaagcagctggtccccaacctctgcagc
atcccattttcttctctgccccctctggaatggcctgtccccagccatacagaccagtac
gagctccatgttgacgtgcagcccaagcctcatcaccgagcccactatgagacagagggg
agcaggggagcggtcaaagcccccactggaggtcatcctgtcgtccagttgcatggctac
aggggtaaggagcccctaggccttcagatcttcatcgggactgcagacgacaggatcctg
aagcctcacgccttctaccaggtccaccgtatcacgggcaagacggtcaccaccaccagc
tacgagaagattatcaactccaccaaagttctggagatccctctggagcccaagaacaac
atgaaagcgataatcgactgtgctgggatcctgaagctcaggaatgctgacattgagcta
aggaagggcgagacggacatcggacggaagaacactcgtgtgcgcctggtgttccgtgtc
cacataccccaacccaatgggcaacacatctcactgcaagtttcctcccatccaatcgag
tgctcccagcggtcggcccatgagctaccaatggtggagaaacaagacatggatagctgc
tctgtcctgggaggtcagcagatgatcttgacgggccagaacttcagctctgactccaaa
gtcatctttatggaaaaaacccatgatggacagcagatttgggagatggagacaacagta
gacaaagataaatgtcagcctagtctgctgttcgttgagatcccttcctatcgtgaccca
tctatctgccatcctgccaaagtgaacttctatgtcatcaacgggaagaggaagcgcagc
cagccacagcacttcacattcaccccactggcagttccctccattaaaacagagcctgtg
gatgactatcctttcaccatgccccagatcctgggtgtttccccgcagtcctactaccac
cacagtcctgtggggatcattcacccagacaacagcctggtctccagcatggcctcatgc
cagcaggtccgatccggcctccccacacccggcccagaaccccgcttccagcaacagagc
ccagccattgtgtacacccgcgggggcaagagtctgagcggcagccccgaagggctctac
cagcagactggagggatggggatgatgcccgacccacaccactctgtcctggtccacaca
ggctccccagtccagcagcaacacggagggggccagggccaacacccctccataattcag
ttctcccccaccaaccaacacctgctcaggggaggcgaccctccacctctccagcctgac
aaccagcagcatatcatctactgtgatggcttccctcagcaggctggagcccaagctcac
tcccctgtcccagcccactccccccagcattaccccaccacggtgatccagcaacagccc
tacgtgcccaaggtggtgctcaagggcaggtcttcccctggagggatggaagcccagaga
tgcgcccctggagaggagcagagagccagcctccctggaggacaggtcacggtcaaggag
gagaacctggatcagatgtaccttgatgacggtgagttaaacgagatcataaggaaggat
ctgaccggcgtacaggccagaggtcagacatag
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