Oncorhynchus keta (chum salmon): 118360853
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Entry
118360853 CDS
T09424
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118360853 (apex2)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
118360853 (apex2)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
118360853 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
118360853
NCBI-ProteinID:
XP_035596227
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Position
28:complement(22447139..22450735)
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AA seq
594 aa
AA seq
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MKIVSWNINGIRTFKGGIKNALESLDADIVCVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNHEGTIGCYGDSSEFSSEELQLLDNEGRA
VLTQHRVMCEDTPETVTVINVYCPRADPEKPERKHFKLQFYKLLQYRAEAILEAGSRVII
LGDVNTSHRPIDHCDPDYIEDFEDHPGRKWLNGLLVDDSEGKEYEKNNEESENTSSKPLC
SGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHLLVKMGFVAADIMPEV
EGSDHCPVWGKLCCPLLSSAKLPPLCTRNLPEFAGRQQKLSRFLVKMDQQQPAREACRDP
LPGSQETGETRENLNPLGSAGTTSTGMKRKLAVESCVPKSKKIMTLKAATPKPQGNLLAF
FKPKSIPVAPTREDPVSQCERGEERNEVTPSQPHTFKGGHSAGQDVPSIPGTPCTEYPQG
VCMGDKVHVPGSNIQDASVNSQNQEKDAALASEATVDPPCPRKGASLGGFWKTVLRGPPP
PPPCKVHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNYFSWVDKGK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataagaaccttcaagggcggaattaaaaat
gcgcttgagtcgctggatgctgacatcgtatgtgtccaagagacaaaagtaacaagagac
ctgctggatgagaggactgctattgttgaaggttataactcatatttcagctttagtcgt
ggacgcagtggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaagagggcttgaccggtctgctgaccaccaaccacgaggggaccattggatgttat
ggtgactcgagtgagttctccagtgaggagctacagctcctggacaacgagggaagggct
gttctcacacagcacagagtcatgtgtgaagacacacctgaaacagttacggttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtaaacatttcaaactgcagttc
tacaagctgcttcaatatcgggctgaagcaattttagaagctgggagccgtgtaatcatc
ttgggagatgtgaatacatctcaccggcccatagatcactgtgacccagattacatagag
gattttgaggatcaccccgggaggaaatggctaaacggtttactggttgatgacagtgaa
ggaaaggagtatgaaaaaaacaatgaggagtctgagaatacctcatcaaaacccctctgc
agcggcaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttcacc
tgttggaacactatgactggagccaggcagaccaactatggcacacgtatcgactacatc
ttcgcagaccatctcttggttaaaatggggtttgtggcagcagacatcatgccagaggtg
gaggggtctgatcactgccctgtctgggggaaactgtgctgccccctcctgtccagcgcc
aagctgcctcccctctgtacccgcaacctaccagagttcgctggcaggcagcagaaactc
tcacgcttcctcgtcaagatggaccaacaacaacctgccagagaggcttgcagggaccca
ctaccaggatctcaggagactggggagacccgagagaacctgaatccactgggatcagca
gggaccacctccactggaatgaaacggaagttggcagtggaatcttgtgtcccaaagagc
aaaaagattatgacactgaaggctgctaccccaaagccccagggcaacctcctagccttt
ttcaagcccaaatccatacctgtggccccaaccagggaagatcctgtgagtcagtgtgag
aggggagaagagagaaatgaagtgactccatcacaaccacataccttcaagggaggacat
tctgcaggacaagatgttccatcaattccaggcacgccgtgcacagaatatccccagggt
gtctgtatgggagacaaagtccatgtaccgggcagcaacatacaggatgccagtgtcaat
agtcaaaaccaggagaaggatgcagctctggcttctgaggctactgtagaccccccatgt
cccaggaagggggcttcactgggcgggttctggaagacggtcctgcgtgggccacctcca
ccgcccccctgtaaggttcatggggaaccctgtgtactccgcacagtcaagaaggcaggt
ccaaacatgggcaagcagttctttgtgtgtaaccgccctcagggtcatgcatccaatccc
gaggctcgctgtaactacttttcttgggtggataaaggaaaatag
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