Oncorhynchus keta (chum salmon): 118361048
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Entry
118361048 CDS
T09424
Symbol
arfgef2
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118361048 (arfgef2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118361048 (arfgef2)
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
118361048 (arfgef2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
118361048
NCBI-ProteinID:
XP_035596665
LinkDB
All DBs
Position
28:32369229..32408033
Genome browser
AA seq
1847 aa
AA seq
DB search
MQQQQRLAQQHQKQTESTKTKSMFLSRALEKILSDKEVKRSQHSQLRKACQVALDEIKIE
LEKQKDGTVVPPRANYIEADKYVLPFELACQSKSPRIVSTSLDCLQKLIAYGHITGNAPD
SSAPGKRLIDRLVETICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTVLLTVRTC
YNIYLASRNLINQTTAKATLTQMLNVIFTRMETQAALESHEQEKDRLCLPHQNPSTSPGR
ICGSPRSDRTQDLSGTPSPAASTPDLHTMPLAPDTPSINGQPEESKTEEDVAVTEEKRDE
TPPPVFEDPVSETPTTVKQPVEEGHEVGQGEKSEVGGDEKPEVDSKPTEQPTSEEVAPAP
EPESQPQTTPEGDHLPEQTEVVPPRPRTDTNQMNGIMDDRGSVSSTDILDAESMQGGQNT
ARFSHILQKDAFLVFRSLCKLSMKPLADGPPDPKSHELRSKVVSLQLLLSVLQGAGPVFR
THEMFVNAIKQYLCVALSKNGVSSVPEVFELSLAIFLTLLSHFKVHLKMQIEVFFREIFL
TILETSSSSFEHKWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERLVNDLSKIAMG
RSGQELGMTPLQELSLRKKGLECLVSILKCMVEWSRDMYVNPNLQANLGQERPSDGEGPE
LKLPDHLASRRDSVSSLDSTMSSSVQSSQPDHPEQYEVIKQQKDVIEHGIELFNKKPKRG
VQFLQDQGMLGNTAEDIAQFLHQEERLDTTQVGEYLGENVRFNKEVMYSYVDQLDFCGRD
FVSALRAFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEFASADTAYVLAYSIIMLTT
DLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIAGKKIAMKDRKEHTITPKT
SKHSVATEKQRRLLYNVEMEQMAKTAKALMEAVSHAQAPFFSATHLEHVRPMFKLAWTPL
LAAFSVGLQDCDDQEVASLCLEGIRCAIRITCIFSMLLERDAYVQALARFTLLTASSSIT
EMKQKNIDTIKTLITVAHTDGNYLGNSWHEILRCISQLELAQLIGTGVKTRYISGVVRDS
QAGIKGFPIGGEEFMPLGLGTLVGGPDRRQMAHIQESVGETSSQSVVVAVDRIFTGSTRL
DGNAVVDFVRWLCAVSMDELASAHQPRMFSLQKIVEISYYNMNRIRLQWSRIWQVIGDHF
NKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIVKKNRSPTIRDM
VIRCVAQMVNSQAANIRSGWKNIFSVFHQAASDHDENIVELAFQTTGHIVMITFQQHFAA
AIDSFQDAVKCLSEFVCNAAFPDTSMEAIRLIRHCAKYVAERPQALREYTSDDMNVAPGD
RVWVRGWFPILFELSCIINRCKLDIRTRGLTVMFEIMKSYGHTFEKHWWHDLFRIVFRIF
DNMKLPEQQTEKHEWMTTTCNHALYAICDVFTQFYEPLSEVLLADIFTQLQWCVKQDNEQ
LARSGTNCLENLVILNGEKFSPEVWNTTCSCMLDIFQTTSPHALLTWRPAGQEEEAGDGK
HMDVDFDTQSQSSYDRALSERGGQSQMSTASDETWKGKPHARVSDQKLFAGLLIKCVVQL
ELIQTIDNIVFYPATSKKEDAENMAAAQRDTLEEAAEEGDPGQGEQGMYRHLSSQHLFKL
LDCLLESHTFARDFNSNNEQRTALWRAGFKGKSKPNLLKQETSSLACSLRILFRMYCDRQ
LQDSWPDIQTRLLLVCSEALAYFISLTSESHREAWTSLLLLLLTRTLRLTDIKFKPHASC
YYPHLCEMMQFDLIPELRAVLRRFFLRIGSVFHIAAPEMGQPQPPAP
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaacaacgtcttgctcaacaacaccagaagcagacggaaagcacaaaaacc
aagagcatgtttctgtctagggcgctggaaaaaatcctgtcggataaggaggtgaagcgg
agccagcacagccagctgcgtaaagcatgccaagtggctcttgatgaaattaaaattgag
cttgagaagcaaaaagatggcacagtggtcccgccccgagcaaactacattgaggctgac
aaatatgtgcttccttttgagcttgcctgtcaatctaagtctccacgcattgtcagcacc
tcgttggactgcttacagaagctcattgcgtatggccacatcacaggcaacgcccctgac
agtagtgctccagggaagaggctcatcgaccggctggtggagaccatctgtaactgtttc
cagggcccacagacagacgagggggtgcagctgcaaatcattaaggctctcctaactgca
gtgacctcccctcacattgagatccacgaggggactgttctactgactgtgcgtacctgt
tacaacatctacctggccagccgcaacctcatcaaccagaccaccgccaaggccactctc
acacagatgctcaatgtgatcttcacccgcatggagacacaggcggctctggagtctcac
gagcaggagaaggatagactgtgtttgccccatcagaacccttccacttcccctgggcga
atatgcggttctccccggtcagaccgcacccaagacttaagcgggacgccatctcctgcg
gccagcaccccagacctccataccatgcccctggccccagacacaccctccatcaatggc
caaccagaggagtccaagactgaggaggatgtggctgttacagaggagaaaagggatgag
acaccacctccagtttttgaagatccagtttcagagaccccaacaaccgtaaaacagcca
gtcgaggaagggcatgaggtggggcagggggagaaatcagaagtaggaggggatgagaaa
ccagaagtcgattcaaagccaacagagcaaccaacgagtgaggaagtggctccagcacct
gaaccagagtcacagccccagaccacaccagaaggggatcatctccctgagcagacagag
gtggtgccccctagacccaggacagatacgaaccaaatgaacggcattatggatgaccgt
ggttcagtgtcttctacagacatcctggatgcagagtctatgcagggtggccagaacact
gctcgtttctcccacatcctgcagaaagacgccttcctggtcttccgctccctctgcaag
ctctccatgaagcccctggcagacggaccccctgacccaaagtctcatgagctgcgctcc
aaagtggtgtctctgcagctgctgctgtctgtgctgcagggggcagggccagtcttccgt
acccacgagatgtttgtcaatgccatcaagcagtacctgtgtgtggccctctccaaaaac
ggggtgtcctctgtgcccgaggtgtttgagctctccctcgccatcttcctcactcttctc
tcccactttaaagtccacctcaagatgcagatcgaggtgtttttcagggagattttcctg
accattctggaaacatcgtccagctcctttgaacacaagtggatggtcattcagaccctc
acacggatatgtgcagatgctcagtgtgtggtggatatctacgtaaactacgactgtgac
ctgaacgctgcaaacatctttgagcggctggtgaacgatctatctaagattgccatgggg
aggagtggccaggagctagggatgacccctctacaggagctgagtctgcgtaagaagggt
ctggagtgtttagtgtccattctgaaatgcatggtggagtggagcagagacatgtatgtc
aaccccaacctgcaggccaacctcggccaggagcggccgtcagatggtgagggtccggag
ctgaagcttcctgaccacctggcgtctcgtcgagacagcgtcagttctctggactccacc
atgtcatctagtgtccagtcctcccagcctgaccacccagaacagtatgaggtcatcaaa
caacagaaggacgtcattgagcacggcattgagcttttcaacaaaaagcccaagcgaggt
gtccagttcttacaagaccaaggcatgctgggaaacacagcagaggacattgcccagttt
ctacaccaagaggagcgcctggacacaacccaggtgggggagtacctgggggagaatgtg
cgtttcaacaaggaggtgatgtacagctacgtggaccagctggacttctgtggccgggac
tttgtctctgctctgagggctttcctggagggcttccggctccccggagaggcccagaaa
attgacaggctcatggagaagtttgctgcccgatatctggagtgtaaccagggacagact
gagtttgccagtgcagacacggcctacgtcttggcctactccatcatcatgctcaccacc
gacctgcacagtccacaggtgaagaacaaaatgaccaaggagcagtacatcaaaatgaac
cgtggtatcaacgacagtaaggacctgcctgaggagtacctgtcctccatatacgatgag
atcgctggcaagaagatcgccatgaaggacaggaaggagcacacgatcacacccaagact
agcaagcacagtgtagccactgagaagcagcgtcgtctgctgtataacgtggagatggaa
cagatggccaagacagccaaggccctgatggaggctgtgagccacgcccaggctcccttc
ttcagcgccacccacctggaacacgtccggcccatgtttaagttggcgtggacccctctc
ttggcagccttcagcgtggggctgcaggactgtgatgaccaggaggtggcctctctgtgt
ctggaggggatccgctgtgccatcaggatcacctgtatcttcagtatgctgttggagagg
gatgcgtatgtccaagccttggctcggttcaccctgctcacagccagttccagcatcact
gagatgaagcagaagaacatcgacaccatcaagacccttatcactgtggcccacacagat
ggaaactacctgggcaactcttggcacgagatcctgcggtgtatcagccagctggagttg
gcccagctgattggcacaggggtgaagacacgctacatctctggagtggtccgggacagt
caggctggcatcaagggtttcccaatcgggggagaggagttcatgcccctgggactgggg
accctggtgggaggtccagacaggaggcagatggctcatatccaggagtctgtgggagag
accagctctcagagcgtggtggtggctgtagacaggatcttcactggttccacaaggctg
gatggaaatgcagttgtggactttgtgcggtggttgtgtgctgtctccatggatgaactg
gcctctgctcaccagccgaggatgttcagtctgcagaagatagtagagatctcctactac
aacatgaaccgcatccgcctgcagtggtcacgcatctggcaggtcatcggagaccacttc
aacaaggtgggctgcaaccccaatgaggacgtggccatctttgccgtggactctctgagg
cagctgtccatgaagttcctggagaaaggagagctggctaacttccgcttccagaaggac
ttcctgcggccatttgaacacatcgtgaagaagaacagatctcccactatcagggacatg
gtgatccgctgtgtggcccagatggtcaactcccaggcagccaacatccggtccggctgg
aagaacatcttctctgtgttccaccaggccgcctcggatcacgacgaaaacattgtggag
ctggccttccagactactggccacatagtcatgatcacgtttcagcagcactttgcagca
gccatagactccttccaggatgcagtgaagtgtctgtctgagtttgtgtgcaacgctgcc
ttccctgacaccagtatggaggccatccggctcatacgccactgtgctaaatatgtggct
gaacggccgcaggctctgcgggagtacaccagtgatgacatgaacgtggccccaggggac
cgggtgtgggtgagaggttggttccccatcctctttgagctgtcctgcatcatcaaccgc
tgcaagctggacatcaggacgaggggtctgactgtgatgtttgagattatgaagagctat
ggacacacctttgaaaagcactggtggcatgaccttttccgcatcgtcttccgcatcttt
gacaatatgaagctccctgagcaacagacggagaagcacgagtggatgaccacgacctgt
aaccacgccctgtacgccatctgtgacgtcttcacccagttctatgagcctctcagtgag
gtcctgctggctgacatcttcactcagctgcagtggtgtgtcaaacaagataatgagcag
ttggcccggtcagggactaactgcctagagaacctggtcatcctgaatggggagaagttt
agcccagaggtgtggaacaccacctgctcctgtatgctggacatcttccagaccaccagc
ccacacgccctgttgacatggcgaccagctggtcaggaagaggaggctggtgatgggaaa
catatggatgtagattttgacacccaatcccagagcagctatgaccgagccctgtcagag
agaggaggtcagagccaaatgtccactgccagcgatgagacctggaagggtaaaccccat
gccagagtgtcagaccagaagctgtttgctggactgctcatcaagtgtgtggtgcagctg
gagctgatccagaccattgacaacattgtcttctacccggcaaccagcaagaaggaagat
gccgaaaatatggctgctgcacagagggatactctggaggaggctgcagaggaaggggac
cctggacagggggagcaaggcatgtacagacacctctcctcccagcaccttttcaagctg
ctggactgcctgctggagtcacacaccttcgccagagatttcaactctaacaacgagcag
aggactgcactctggagagcaggatttaaggggaagtcgaagcccaatctgctaaagcag
gagaccagtagcctggcctgtagcctgcgtattctgttccgtatgtactgtgaccggcag
ctccaggactcctggcctgacatccagacacgactgctgctcgtgtgcagcgaggccctg
gcctactttatcagcctcacctctgagagccacagagaggcctggacaagcctgctcctc
ctgctgctcaccaggactcttcgactgaccgacatcaagttcaagcctcatgcctcctgt
tactacccgcacctgtgtgagatgatgcagtttgacctgatcccagagctccgcgccgtc
ctacgccgtttcttcctccgcatcggctccgtcttccacatcgctgctcctgagatgggc
cagccacagcccccggcaccctag
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