Oncorhynchus keta (chum salmon): 118361081
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Entry
118361081 CDS
T09424
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00310
Lysine degradation
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118361081 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118361081 (prdm2a)
03036 Chromosome and associated proteins [BR:
oke03036
]
118361081 (prdm2a)
Enzymes [BR:
oke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118361081 (prdm2a)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118361081 (prdm2a)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118361081 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_2
zf-C2H2_jaz
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
118361081
NCBI-ProteinID:
XP_052338806
LinkDB
All DBs
Position
28:33995410..34013762
Genome browser
AA seq
1478 aa
AA seq
DB search
MEDSHTLYISELGDDDNLEEEMEDKELEETHCSLYLMSMETDELADSNTSCQKPEAKGCD
LKPDLESVSHSATPELPEDPDHDPDVELQDSFPCQFCERNFTSKQGLERHIHIHTLANHH
THIFKCKYCSKSFGSKIGRRRHERRHENAKARPGSLIKPVEPPSSALQRNGPECVSSPSS
SSASVLADREQVSTSDEHGELQGGHTCKYCKKVFSTHTNMRRHQRRIHERHLRLKGKEAP
LLQEAKHLKLPPIKSQQDTNNTSPVAVLEIESDQEEQYMLDISGNISENLSFYIDGKIVS
TSTVSGCEVVEVNSGSATLVGLNAVIINPAQISQALKVETATHTGKGIPGQPLTKRRTAT
PPLLPQIKTELESEVLSSSSSSIVSSLIESLIPQNTESTILQRERTVYLSPKLKQLLQMQ
DGLKPSFALITEGQKLCSPLSLTVLPAGLGRFKRRTGSPPNSPQQSPMSNVESTTTDVGV
SIAVNAPTSESQCSSPACSLSSNDDSEISNSPPVNDAMTTRVLPEGWSPMSGGCSCNQQP
LDLSNAVKKSEDEALREAVLDLSVHRKSADSEVKRILVPQPLNKKRKPNTSMLEKVLMNE
YANLEVAAEQEISILENHDAPLVTDFAIVTASDMSPATEGEVFGLTFPSAALSPSPSSLA
LVPRQSISPCTIALASPSPHPILPTAPSLITVLAPPTSSSSNSTNQPILQVLASKISPNP
LIICTEDSLNSAECEWRAALPDWATSNSASQLATSKPLDPTLNLQGHVFLTDHTLNQIAL
NTTTVESNIGFEVPTCSPALTLNDSLINSFDITSNTVLIECTVALETPENLVPTTIDFQE
NNFESTAPAQIVINQQQPLSLPHETVDPSILVSSLEQSVTLSTLSAVISECPTRQESISS
PVPAIIKTESNQKVVSEDISICPSKTPPPSEGTSQVEESSNETLSKLQETFTKEFICNVC
DKLFHSMKELGHHVSEHSDEWPYKCEFCVLLFGKPTALLDHRSTLHGVGKSYVCCACTKE
FAYLCNLKHHQKELHPGQECKYTEEENGKLRPQNYNNATKGSTEALSYCAMAESNKPVIK
DEGELDDATEELFTTIKIMASEGGKPKGLDVCLGINQHYPSFKPPPFPYHNRTPVGSVAS
ATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPNKNPIPLRHF
AKAQNGVLSSTNSTNGQNALHTASQTNRPKLNQEPPAKLKLNALNKRKKQLVQRAISQRS
KSTSLTKRTSSLVDEEQEIYVCPHCIREFTYRRSRTKHMAVCPRKPAAKEAKKRKDGSIS
YTKENNGHLRREVLHLEEKSDHEQKSRAHSSSPTKRTAILPAHKVLSNKKSKAIIAMASV
QTLQEAPKLTALSLVHPFNSPQRQGSRMQHGVKEIRSNITMVKSHQQPPQVDEHPCSQSG
RVRGPVTRSLQQIVVIDSAKEEQLTSQDPPGDLQVFYA
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctcacactttatacatctcagagttgggagacgatgacaatttagaggag
gagatggaggataaggagcttgaggaaactcactgcagtctttatttaatgtccatggaa
acggatgagctggcagattcaaacacaagttgccaaaaacctgaggccaaaggctgtgac
ctgaagccggatttagaatcggtctcccattcagcaacccctgagctcccagaggatcct
gaccatgaccctgatgtagagctccaggactcatttccctgccaattctgtgaaagaaat
tttaccagcaagcaaggcttagaacgtcacatacacatccacaccttagctaaccaccac
acacacatatttaagtgtaagtactgcagcaagtcctttggctcaaaaattggccggcga
cggcatgagaggagacatgaaaatgcaaaggcaaggcctggatctttaataaagcctgtg
gagcctccaagttctgccctacagcgcaacggtccagaatgtgtgtcttctcccagtagc
tccagtgcctctgttttggcagacagagaacaggtgtctacgtcagatgaacatggagaa
ttacagggtggtcacacttgcaagtattgcaaaaaggtttttagcacacatacaaacatg
cgacgacatcagcgcaggatccacgagcgccatctccggctcaaaggtaaggaagcccca
ctgttgcaggaagcaaaacatctaaagctaccccctattaaatctcaacaggataccaac
aacacaagcccagtagcagttcttgagatcgaaagtgaccaagaggagcaatatatgctg
gatatctctggtaacatcagtgagaacctcagcttttatatagatgggaagattgtatca
acaagcactgtcagcggctgtgaggtagttgaagtgaactctggatctgctactttagtc
ggactaaatgctgtgattattaatcctgcccagatcagtcaggctcttaaagtagagact
gctactcacacaggaaaagggatacctggtcaacccttgacaaaaagaagaactgccaca
ccacctcttctaccccaaatcaaaactgaactagaatcggaagttttgtcctcttcttca
tcatcaattgtgtcatctttgatagaaagtctcattcctcagaacacagagtctactatc
cttcagagagagagaacagtttatctgtcacctaagctgaaacagctcttacagatgcaa
gatggcctcaaacccagctttgccctgatcacagaaggccagaagctgtgttcaccactt
tccctgactgtcctcccagcaggattggggaggtttaaaagaaggaccggatctccccca
aactcaccacaacaaagccctatgtcgaatgttgaaagcacaacaaccgatgtgggtgtt
tctattgctgtcaatgccccaacgtcagagagccaatgcagttcacccgcatgcagttta
tccagcaatgatgacagtgagatctccaacagtccaccagtaaacgatgcaatgacaact
cgtgtcttgccagagggatggtccccaatgagtgggggttgttcctgcaaccagcaacct
ttggacctctcaaatgctgtcaagaaaagtgaagacgaagccctgcgggaagctgtgttg
gacttgagtgtgcacagaaagagtgcagattcggaagtaaagaggattttagttccacag
cccttaaataaaaagaggaagccaaacaccagcatgttggagaaggtgctgatgaatgag
tacgcaaacctagaggttgctgcagagcaagaaataagtatattagaaaatcatgatgca
ccgttagttacggactttgccatagttactgcttcggatatgtcacctgctactgaaggc
gaggtgttcggattaacttttccctctgcagcacttagtccatccccttcctctctggct
ttagtccccaggcaatcgatctcaccatgcaccatagcacttgcttccccatctccacat
ccaatcttacccactgctccgtcactaattactgttttagcaccaccaacatcttcctct
agcaattccacaaatcaacctatccttcaagtattggcctctaagatatctcctaatcct
ttaataatctgcacagaagattcattgaattcagctgagtgtgagtggagagctgctttg
ccagattgggctacctctaattctgcaagccaacttgccacctctaaaccccttgaccca
actctcaatctacaagggcatgtgtttctcacagatcacactttaaatcaaatagctctg
aacactaccacagttgaatccaacattggatttgaagtgccaacatgctctccagcttta
actctaaacgattcccttatcaactcctttgacattactagtaatactgttttaattgaa
tgcacagttgctcttgaaaccccagagaaccttgtccctaccacaattgatttccaagag
aataattttgaatcgacagcacctgcgcaaattgtcataaatcagcagcagcctctgtcc
ttgcctcatgaaaccgttgacccttctattttagtatcttctttagagcaatcggttacc
ctttcaacgctgtctgcagtcatatctgaatgtccaactcgtcaagagtccatttcctcc
cctgttcctgccattattaaaactgaatcgaaccaaaaggtagtatcagaggacatatct
atctgcccctctaaaacgccacctccctctgagggcacaagtcaagtggaagaatcctca
aatgagaccctctccaagctacaagagactttcactaaggaattcatatgcaatgtatgt
gataagctttttcattcaatgaaggaactgggtcatcatgtaagtgagcattctgatgaa
tggccatacaaatgtgagttctgtgtgctactctttggaaagcccacggcattgcttgat
cacaggtcaaccctccatggtgtcggcaagagctatgtttgctgcgcatgtacaaaggaa
tttgcttatctttgcaacctgaaacatcatcaaaaggagttgcaccctggccaggaatgc
aaatacacagaggaagaaaatggcaagctacgaccccagaactataacaatgcaacaaaa
ggtagcacagaggctttgtcctactgtgccatggcggagtccaataaaccggtcataaaa
gatgagggagaattagatgacgctactgaggaactctttaccacaataaagataatggct
tctgagggaggcaaacccaaaggcctggatgtttgccttggcatcaaccaacactatccc
agttttaagccgcctccgtttccatatcacaaccggacacctgttggctctgtagcctca
gctaccaacttcaccacccacaacatcccacaaaccttcagcactgctatccgatgcact
aaatgtggcaaaagctttgataacatgccagagctgcacaaacacattcttgcctgtgca
aatgccagtgacaaaagacgctacacacccaataagaaccccattcctcttcgtcacttt
gcaaaagcccaaaatggagtactgtcctctactaattccacaaatggccaaaatgctcta
cacacggcaagtcaaacaaatcgtcccaaactcaatcaggagccacctgccaagttgaag
cttaatgcactcaacaaaaggaaaaaacagctggtacagagggccatttcacagaggagt
aagtccacctctttgacaaaaagaacctcttctctagtcgatgaggagcaagagatctat
gtctgtccgcattgcattagagaattcacataccgccgcagccggaccaagcacatggcc
gtctgccccaggaaacctgctgccaaagaggccaagaaaagaaaagatggcagtatctct
tacactaaggaaaataacggccaccttcgcagagaagtccttcatttggaagagaaatct
gatcatgaacagaaaagcagagcccatagttcaagtccaacaaagaggacagccatatta
ccagctcataaagtcctgtcaaacaaaaaaagcaaagccatcattgcaatggcaagtgtc
caaacactgcaggaggcacccaaactgactgcactgtctcttgttcaccctttcaactcc
ccacaacgtcaaggcagtaggatgcagcatggtgtgaaggaaattcgttctaacattaca
atggtgaaatcccaccaacaaccaccccaggtggatgagcacccctgcagtcagagtgga
agggtgaggggaccagtgacccgcagtctacagcagattgtcgtcatagattcagcaaag
gaagaacagctgaccagtcaggacccaccaggggatctgcaggtattctatgcatga
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integrated database retrieval system
