Oncorhynchus keta (chum salmon): 118361088
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Entry
118361088 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118361088
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118361088
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PYRIN
PRY
SPRY
DUF4200
End3
Motif
Other DBs
NCBI-GeneID:
118361088
NCBI-ProteinID:
XP_035596734
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All DBs
Position
28:complement(34469795..34471711)
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AA seq
427 aa
AA seq
DB search
MATPASVHELLLDTLDSLVSSELKRFQYLLTKNMSDGWFPIPKSRLENADREDTVEKMVS
AYSHEGAVKISLTILRKMGQNDLAMKLERGTLEEVPALKKTAFHQKEELKSNLESLRKNQ
EMYKSMEVHIKKQRADAERQMREQFEKFHRFLREEEEARLVALREEEEQKGMAIASEMER
ILKQISSLEQDLQNDDRTFPVSYKYIQNSTLPGTQQVSGVLIDMAKHLGNLQFRVWEKMK
EIVQFTPVILNPNTANRWLSVSDNLTSVRFNNIGQQITDNPERFTQYAKVLGSEGFSSGK
HIWEVEVGDHPEWNLGVAKETIDRKGEILASPAYGIWAILNRNGVYQSGKGEPLAFEKLK
RIRVQLDFTSGEVSFYDPKDMTHIYTHKDTFAERLYPYFLVGLAGGANNPDIHICQSEVS
LTVMASQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcctgcttctgtccatgagctgctgctggacactctggatagcttggtctca
agcgagctgaagagatttcagtatctactgactaagaacatgtcagatggctggtttcct
attcctaagagccgtctggagaacgctgacagggaggacaccgtggagaagatggtcagc
gcctacagccatgaaggagcagtgaagatctcactgacgatcctgaggaagatgggccag
aatgatcttgctatgaagctggagagaggcactctagaagaggtgccagcactgaaaaag
actgcgtttcatcaaaaggaagaactgaaatccaatttagagagtcttcgaaagaatcaa
gaaatgtacaaaagcatggaggtccacattaagaagcaacgtgcggacgcagagaggcag
atgagggagcagtttgaaaagttccaccggtttctgcgagaggaagaagaggccagactg
gttgcgctcagggaggaagaggagcagaagggcatggctattgccagcgagatggagaga
attctcaagcagatctcttctcttgaacaggacctgcagaatgatgaccgcacattccct
gtgagctacaaatacatccagaacagcacattgccgggtacacagcaggtctcaggggtg
cttatcgacatggccaaacacctgggaaacctgcagttcagagtgtgggagaagatgaag
gagatagtccaattcactcctgtgattctgaaccccaacactgcaaaccgctggctctct
gtgtctgataatctgaccagtgtgagatttaataacataggtcagcaaatcactgacaac
ccagagaggttcacacagtatgccaaggttctgggctcagagggcttcagctcagggaag
cacatctgggaggtggaggtgggggaccatcctgagtggaacctgggagtagctaaagaa
accattgataggaagggggagattcttgcttcaccagcttatggaatctgggctatactg
aacaggaatggtgtgtatcaaagtggaaagggtgagccccttgcttttgagaagctgaag
aggatccgagtgcagctggacttcaccagtggggaggtgtctttctatgaccccaaagat
atgacacacatctatactcataaagacacgtttgctgagagactgtacccatactttctt
gttggactggctggcggtgccaacaaccctgatatacatatctgccaatcagaggtgtct
ctgacagtaatggcatctcagtga
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