Oncorhynchus keta (chum salmon): 118361127
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Entry
118361127 CDS
T09424
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X8
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oke01001
]
118361127
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118361127
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118361127
Protein kinases [BR:
oke01001
]
Serine/threonine kinases: Other
Other
118361127
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118361127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
WD40
Beta-prop_WDR19_1st
LisH
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
118361127
NCBI-ProteinID:
XP_035597280
LinkDB
All DBs
Position
Unknown
AA seq
1539 aa
AA seq
DB search
MASASVDSKAELTSLLEQWEREQQASTPDLVNILTKISELVERETEEYHKADPDPFDDRH
PGRADPECVLGQLLKILFKNDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPGLETAVV
FQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVVVPLMLQRLRE
LQAKDTENRKGFKRPSPRKSLGEPLLPLDEETVDGGFEDIPFPPGNEGIERNEKGSDEDR
VEIHSHKSYSEISFHLNYLNHTHKTSSCANSAVKGLMKPASAPPPLSHRDFPDGREEGST
HLKRRTERENGRKVKQKLNFSLPDPERNFSELSNSSWSEMSPWVIGNNYHLYPLTPEMEQ
RLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQLTFEALKYLASLLLHKKF
AAQFVVHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVSYSLW
LLECSHASGCCHATMFFSITFSFRAVLELFDRQDGLRRMVNLISTLEILNPEDQGALLSD
DQIFSSRQTAKHTCMALRRYSEAHLAIKVEQVKQSLQRTEGGAPIHPQPYYKACSYTHEQ
VVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDIL
SILTVVPKTQLLMSESVAVLDGEGGNAISTVGMGVVLVVAEGEVFVNDAEIQKSALQVVI
NCVCAPDKRMSGIGKFISGTPLRRLPQSTKNSESVLTKMWNVVQSNNGIKVLLSLLTVKM
PITDADQIRTLACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFC
KFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEKELLLLIRNHLVVKGLHDT
ATTLTKEADLPMAILPHPSSSALLPVVVPPASPAPALPRTPRLANGVTARLVSHSSHPSV
LLSVHPQPRPSTSQLLMVPPAAPPLLTPHQSNGSPLIGRIVFMRERPSPCPVPAICKKPR
VLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQHARCKNPVTTCPPFSLFT
PHQCPEPKQRRQAPTNFTSRHTRRVVYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDE
SGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTS
ASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGTKEHIAHIYDIQTGQKTLT
LHYPDLSNNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEL
IVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADNEDDLLEMQMKTPFGSS
FRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAE
EEEDEEDQEDDDQEDDDDDEDDSDDDIDTDPLVAELENENGGEDEEDGNNEFSPSDDEEV
ARLLEGDDDDDSDEEDGDLALDNTDSSDLEDDIILSLNE
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctagtgtggattccaaggcagagctgacctctctgctggagcagtgggag
agggagcagcaggccagcacaccggacctggtcaacatcctgactaagatttcagagctg
gtggagagggagactgaggaatatcacaaagctgatccggatccttttgatgacaggcac
cctgggagagcggatccggaatgcgtcttgggtcagctgctaaagatcctgttcaaaaat
gatgacttcatgaatgctctcgttaatagctatgtgatgaccagtagagagctcaccctc
aacactgcagcttgtcgcctgctgcagaatatcatgcctgggttggagactgctgtggtc
tttcaggagaaggagggcatagtggagaggctttttaaatgggcccaggaggcggagcag
cccctgagaatctatgctacaggcctgttggctggagcaatggagaaccaggacatcgct
gccaactacagggaggagaactctgtcgtggtgcctctgatgctgcagcggctacgcgag
ttgcaggccaaggacactgaaaaccggaaggggtttaaacggcccagtcccaggaagagc
ctgggggaacctctccttcctctggatgaggagacggtcgacgggggcttcgaggacatc
cctttccccccggggaatgaaggcattgagaggaatgagaagggatccgatgaggaccga
gtggagatccacagccacaagtcttacagcgagatctccttccacctcaactaccttaac
cacacccacaagaccagtagctgcgctaactccgctgtcaaaggactgatgaagcctgcg
tctgccccgccgcctctgtcccaccgggacttccccgacggcagggaggagggcagcact
cacctcaagaggagaacagagagggagaatggacggaaggtgaaacagaaactgaacttc
tccctgccagacccggagaggaacttcagcgagctgtccaacagcagctggtctgagatg
agcccctgggtgattgggaacaactatcacctttaccctctgaccccagagatggagcag
aggctcatcctacagtacctcacccctctgggagagtaccaggagcttctggcagtcttc
atgcagatgggagcctgtgagctgctcatccattacatggacctgaagcagaccaacgat
gtacagctcacctttgaggctctcaagtatctagcctccctgctcctgcataagaagttt
gctgcccagtttgtggtccatggaggggttcagaagctgttggagatccccaagccttcc
atggctgccacaggggtgtctctgtgcctctactacctggcctacaaccaggatgccatg
gagagggtgtgtatgctgccccactctatcctgtctgacgtggtaagctacagtctgtgg
ctgttggagtgttcccacgcctcgggctgctgccacgccaccatgttcttctccatcact
ttctccttccgagcagtgctggaactcttcgacaggcaggacggcctccggcgcatggtc
aacctgatcagcacattagagatcctgaaccctgaggaccagggtgccctgctgagtgat
gaccagatcttctccagcaggcagacggccaagcacacctgcatggccctgcgcaggtac
tccgaggcccatctggccatcaaggtggagcaggtcaagcagtccctgcagcggactgaa
ggaggtgctcccattcacccacagccttactacaaggcatgtagttacacccacgagcag
gtggtggagatgatggagttcctgattgagtacggcccagtcaggctgtactgggagcct
gcagaggttttccataagctctcctgtgtgcagcttctcctgcagctcatctccattgcc
tgtgactggaggacctactacggcaggagtgacacagtgcgttatgccctggacatactg
agcatcctgacggtggtccctaagacccagctgctgatgtcggagtctgtggccgtgctg
gatggggaggggggcaacgccatctccaccgtgggtatgggtgtagtcctggtggtggca
gagggagaggtgtttgtgaacgatgccgagattcagaagtctgctctgcaggtggtcatc
aactgtgtgtgtgctccagataaacgcatgtccggcatcggcaagttcatctctggcacg
cccctcagacgtctaccccagagcaccaagaacagcgagagcgtgctcaccaagatgtgg
aatgtggtgcagtccaacaacggcatcaaggtactgctgtccctgctgacggtgaagatg
cccatcacagatgcggatcagattcggacgctggcctgtaaggccctggtgggtctgtcc
cgctccagctcagtcagacagattatcagcaagctgcctctcttcagcagtggacacatc
cagcagctcatgaaggagcccgtgctccaggacaaacgcagcgaacacgtcaagttctgc
aagtttgcggcagagctaatcaagcgggtgtctggtaaacccctcatgatcgggacggat
gtctccctggcctggctgcagagggcaaacgtggtggcccagtccagaatatcctttcct
gagaaggagctactgctgttgatccggaaccacctggtggtcaagggtctgcatgacact
gccaccacactcaccaaagaggccgacctccccatggccatcctcccccacccatcttcc
tcagctttgcttcctgtcgttgttccccctgcttctcctgcccctgccctcccccggacc
cctcggctggccaatggggtcacagcacggttggtgagccacagctctcatccgtccgtg
ctgttgtcagttcacccccagcctcgtccctcgacgtcgcaactcctcatggtacctccg
gccgcccctcccctgttgacccctcaccaaagcaacggctctcccctgattgggcggatc
gtgttcatgcgagagcgcccgtcgccgtgccccgtgcctgccatctgtaagaagccgcgg
gtgctgaggcagaagtcagactacggtgccttcagccagagtccagccatgaagaaacag
ctggacagacacctgccctctccacccgccctggacagcatcatcacagagtacctgagg
gagcagcacgcgcgctgcaagaaccccgttaccacctgcccccccttctccctcttcacc
ccccaccagtgccctgagcccaagcagaggcgccaggccccaaccaacttcacctcccga
cacacacgcagggttgtctacccaaaatacggaggggtggatggcggctgcttcgaccga
cacctcatctttagcaggttccgacccatctctgtgttcagggaagcagacgaggatgag
agtgggttcatgtgttgtgccttctctgcccgtgagcggttcctgatgctggggacgtgt
acgggccagctcaaactctacaatgtgttcacaggccaggaggaggccagctatagctgc
cacagctctgccatcacacacctagagccatcacgggatggctctctgttgttgacgtca
gcatcatggagttatcctctgtctgcactgtggggcatgaagtcagtgttcatcatgaag
cattccttcttagatgaccattatgtggagttcagtaaactttcacaagaccgagtcatt
ggcacaaaggaacacatagctcatatctacgacatccagacagggcagaagaccctcacc
ctccactacccggacctgtccaacaactacaagaggaactgtgcaacctttaaccccacc
gacgacctggtgctgaacgacggcgtgctgtgggatgtgcgctcagctcaggccatccac
aagtttgacaagttcaacatgaacatcagcggagtgttccaccccaatggcctggagctc
attgtcaacactgagatttgggacctgcggaccttccacctgctccacacagtgccagct
ctggaccagtgcaggatcgtcttcaacaacaacggcacggtcatctacggagcgatgcta
caggcagataatgaggacgatctattggaaatgcagatgaagactccctttggctcctcc
ttcaggacgttcaacgccactgactacaaacccattgccaccatcgacgtgaagaggaat
atatttgacctctgcacggatactaaggactgctacctggctgtgatcgagaaccaagac
tcggtcaacacagacacggtgtgcagactgtacgaggtgggacgccagagactggctgag
gaggaggaggatgaggaagatcaggaggatgacgatcaagaggatgacgatgatgatgaa
gatgactctgatgacgacatcgacacagacccactggttgccgagctggaaaatgaaaat
ggaggagaggacgaggaagatgggaacaatgaattctctccctctgacgatgaagaggta
gctcgtctgcttgagggggatgatgacgatgactcggatgaggaagatggggaccttgcc
ctggataacacagacagctcagaccttgaggatgacataatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
