Oncorhynchus keta (chum salmon): 118361141
Help
Entry
118361141 CDS
T09424
Name
(RefSeq) rab effector MyRIP-like isoform X1
KO
K22237
Rab effector MyRIP
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118361141
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118361141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
FXR_C1
DUF155
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
118361141
NCBI-ProteinID:
XP_052339144
LinkDB
All DBs
Position
28:complement(47720764..47862571)
Genome browser
AA seq
1040 aa
AA seq
DB search
MGRKLDLSGLTDNEAEHVLKVVQRDMKLRKKEEDRLSEMKQELAEEGSRCSILSKQQRFN
EHCCIRCCSPFTFLVNPKRLCLDCQYNVCKTCRTYSKREKAWLCTVCQKTRILRTQSLEW
YYNNVKSRFKRFGSAKVLKTLYRNHIVERGGILDLPESSVHDGSNDNDGSVCGSDSTFYR
QSEGHSMAETLTVALRVAEEAIEEAIANAEEFSDSLEKQNEARYLRDHKEELIEELATTI
VQKIIQRRKHSDMQTEYDFVWPQRPSQGQPQGSELSSPSQHPHSTLAQANQAHLKSSYSL
WRSRSAFSLTSDDSPEKVTEALMGAGGGVQDYASLKKEAARASSLPSWKSVDRLDNSSAS
SVLQSPDGNWIALQTSQHSRPSLLAKRKSLVFSVLEKESGVVSAYDEMGSDSDQENDKGG
WGAALRQFRQKLSDETYYTDSQHDPEWTYTPVHLPVTSPSSGQYTNTETVNSDSESSSVP
SARPRKPFHNVMGRKGPNSDSHLHPQQAQYHHHHQHQNFPSYPLHPEALDVNFNPKVTGD
SSEAEDSMQSDQVRRSRRRRKSKREAAGNQAHTQTHTQTLYAQSVQENSFLLNGLLKRGM
SEEMAAPDVVPEAMTPEDQDTVAPNSAAPSPRNPMTPDPLSTSSTGPGSGDTLEQELRSK
LSQLVGRANSKEVVSSSEDEPIKSPGGRDRESDRPKEKLRQNEREGDRQSERPRDRLRST
SQDRAKRETIESVKEPELKKRERLTERPILREEESVKESRLGRGGKSLEEKVDDREEKRV
EKNRLSKRPQGKEVDRKTEKKGEQVEDQNEKTGSTPTSLVITPSVQEGVLCDGQEGQNWL
ELQQRLQLLSSLLQQKYSAASLCSITTEVLKVLNATEELIGEAGGDSVTPSECMSASESF
SSSLETRELDQKLTKMEEKVYLAAGAVYGLEGALGDLEEVARDISSITSDRELAFLEDQV
ATAATQVQQSELQISDIEVRILSLKTAGLNVTACNRFSKFPKPKPTPQTLDTSRQQRRKL
PAPPAKDKESEQQVRALQPY
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagctggacctgtcgggcctgacggacaacgaggcggagcatgtgctgaag
gtggtgcagagggacatgaagctgaggaagaaggaggaggacaggctcagtgagatgaag
caggagctggcggaggaaggcagtagatgctccatcctctccaagcagcaacgcttcaac
gagcactgctgtatccgctgctgctctcccttcaccttcctggtcaaccccaagcgcctg
tgtctggactgccagtacaacgtctgcaagacctgccgcacctacagcaagcgagagaaa
gcctggctctgtaccgtctgccagaagaccaggatattgcggacccagtctctagaatgg
tactataacaacgtgaagagccgcttcaagaggttcggcagtgccaaggttctgaagacg
ctctacaggaatcacatagtggagagaggaggcatcttggatctaccagaaagcagtgtt
cacgacggaagcaatgacaatgatggcagcgtctgtggcagtgactcaaccttctacagg
cagagtgaaggacacagcatggcagagaccctcacggttgccctgcgcgttgctgaggag
gccatagaggaagccatcgccaacgcagaggaattcagtgacagcttggagaagcagaat
gaggctcgctatctacgggaccacaaagaagagcttatagaggaactggccacaaccatc
gtacaaaaaatcatccagaggaggaagcattccgatatgcagacagagtatgactttgtg
tggccccagagaccgagccagggccagcctcagggcagtgagctgtcctcccccagccag
caccctcacagcaccctggcccaggccaaccaggcccacctcaagagctcctactccctc
tggaggtcgcggtcagcattctccctgaccagtgatgactccccagagaaggtgactgag
gcactaatgggggcggggggcggggtacaggactacgcctctctgaagaaggaggcggcc
agggcctcctcactgcccagctggaagagtgtggaccgcctggacaactccagtgcgtct
tcggtgctgcagagccctgacgggaactggattgcgctgcagacctctcagcactcccgt
cccagcctactggccaagagaaagtcgctggtgttcagcgtcctggagaaagagtctggc
gtggtctcggcctacgacgagatgggctctgattccgatcaggagaacgacaaggggggc
tggggggccgcgctccgccagttccggcagaaactctcagacgagacgtactacacggac
tcccaacacgacccggagtggacgtacaccccggtccacctcccagtcacctcgccctcc
tcgggccagtacaccaacacggagaccgtcaactctgactcagagtcctcgtcggtaccc
tccgcccgcccccgcaaacccttccataacgtgatgggaagaaaaggccctaactcagac
tcgcatcttcatccccagcaggctcagtaccaccatcatcatcaacaccagaacttcccc
tcgtacccgctccacccggaggcgctggatgtgaactttaaccccaaggtgactggggat
agtagcgaggcagaggacagcatgcagagcgaccaggtcaggaggtcgcggagacgcagg
aagagcaagagggaagcggcagggaaccaggcccacacacagacacacacacagaccctc
tacgcacaatctgtacaggagaacagtttcctgctgaacggcctgttgaagaggggcatg
agtgaggagatggccgcccctgatgtggtgcccgaggccatgacccccgaggaccaggac
actgtggcccctaactctgcggcccctagcccccgtaaccccatgacccctgacccccta
tccaccagcagcactgggcccggctccggagacacactggagcaggagctccgctccaaa
ctgagccagctggttggacgagccaacagcaaagaagtagtgagctcatccgaggacgag
ccaatcaaaagtcctggagggagagaccgagaaagtgacagaccgaaagagaagctgagg
cagaatgagagagaaggagatcgacagagtgagagaccgagagacagactgaggagtaca
agtcaggatagggcgaagagagagacaatcgagtcagtgaaagagccggaactgaaaaag
agagagagactaacggaaaggccgatattaagagaggaggagagcgtgaaggagagtagg
ttggggagaggaggaaagagtttggaagagaaagtagatgacagagaagagaagagagtt
gagaagaacaggctcagtaagagaccacagggaaaagaggtggacagaaagactgagaaa
aagggggaacaagtggaagaccaaaatgaaaagaccggatccacgcccacctcgcttgtt
attaccccatctgtccaggagggggtgctgtgtgacggacaggagggacagaattggctg
gaactacagcagaggctacagttgctctcttctctcttacagcagaagtactcggccgca
tctctgtgcagtatcaccacagaagtcctgaaggtgctcaacgctaccgaggagctgatt
ggtgaggcggggggcgatagcgtcaccccctcagagtgcatgagcgcgtctgaatccttc
tccagcagcttagagaccagggagctggaccagaaactcacaaagatggaggaaaaagtg
tacctggctgcgggggcggtgtacggcctggagggggcactgggggacctggaggaagtg
gcccgggacatcagcagtatcacctcagacagagagctggccttcctggaggaccaggtg
gccactgccgccacccaggtgcagcagtctgagctccagatatcagacatcgaggtgagg
atattatctttaaaaacggctggactgaacgttaccgcctgcaatcgtttctccaaattc
cccaagccaaaacctacgcctcaaaccctcgacacgtcacgtcaacagaggagaaagcta
cctgcccctccagccaaagataaggagtctgagcagcaggtgagagcacttcagccgtac
tga
DBGET
integrated database retrieval system
