Oncorhynchus keta (chum salmon): 118361151
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Entry
118361151 CDS
T09424
Name
(RefSeq) rho GTPase-activating protein 12-like isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118361151
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118361151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-WW_linker
RhoGAP
WW
PH
SH3_1
SH3_9
SH3_10
Motif
Other DBs
NCBI-GeneID:
118361151
NCBI-ProteinID:
XP_052339212
LinkDB
All DBs
Position
28:53898681..53996983
Genome browser
AA seq
935 aa
AA seq
DB search
MLSTNRGQRSTRIEGVNTIMADRDGHGGGVDVPTIAPGQVYVEVEYDYEYTAKDKLISIR
QGECYMLVRKTNEDWWQVRKEEGMKAFYVPAQYVREVRRALMPPQKPLVSCGIGGVSGAF
RVKPTVLDICRASNENLNNRPPQEMSSFGRPSPSSTPSPFPVHVTPPALPKDANQNPGSP
RHSKPPGVAELVLLHNNNNHHHSNNSTLPRMRADSPPPRAPYNDHKRHQGSDDTEQTPSS
SGDSPGEGSETLRNDSESGDDLSSSSAEHMQTTSPAGQGRPESPVYTNLQELKISQSSLP
PLPSSSPLHVLGDWETHKDLTGRHFYYNKACGERTWKPPRVRDATCSTSSSRGDPHGTGE
MEPLSSEENCHSSTNSSQSDSQYGTPPRGWSEELDEHGHTLYVCEYTHEKWIKHVDEQGR
PYYYSADGSRSEWELPKYNLSPPQPGDPPKSRSLERKHPDPIVLTKWRHSTYVLDLNDKF
SFKKLRRFESSHHMGRSGRNLYRGKPSEKCGVLNVTKITENGKKVRKNWTSSWTVLQGSS
LLFAKGQGSGTSWPHYRSGSIPELLLTLLANWKRSVKPCPAVSYVHSVHGRAPAATKFVG
NQSKPEFTVDLRGGSVDWASKDKSSKKHVIELKTRQGTELLIQSEIDSVINDWYRALTDT
ISTHAWESDEAIEEDMPESPGTEKQDKEKDHRDSKKNRAMKTSISMDSTDQKKTRVKLKK
FLTRRPTYQAVKDKGYIKDQVFGCSLSSLCQRENTSVPNFVTTCIDHVETTGLSIDGIYR
VSGNLAVIQKLRFAVNHDEQLELEDSKWEDIHVTTGALKMFFRELPEPLFTYDSFNDFIN
AIKCSDYKQRVNSIKDLIKQLPKPNHDTMQCLFKHLRRVIDHGEANRMTTQSVAIVFGPT
LLRPETETGNIAVHMVYQNQIVELILLEYENIFGR
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcaccaatagaggtcaaaggtcgacacggatagaaggggtcaacaccatcatg
gctgacagagatgggcatggcggcggggtggatgtgcccaccatcgccccaggccaggtg
tacgtggaggtggagtacgactatgagtacacggccaaggacaagctgatctccatcagg
cagggggagtgctacatgctggtcaggaagaccaacgaggactggtggcaggtgaggaag
gaggaggggatgaaagccttctatgtcccagcacagtacgtcagggaagtgcggcgggcg
ctcatgcccccccagaagcctctcgtgtcgtgcgggattggtggggtgagtggggcgttc
cgtgtgaagcctacagttctggatatatgcagagcgtccaatgagaacctcaacaacagg
ccgcctcaggagatgtctagttttgggcgtccgtcgccctcctccacgccgtcacccttt
ccggtgcacgtcaccccgcccgctctgcccaaggacgccaaccagaacccgggcagcccg
cggcacagcaagccccctggtgtagccgagctggtgctcctacacaacaacaataaccat
caccacagcaacaactccacgttaccacggatgcgggcggactctccgccccccagagcc
ccttacaacgaccataaacgccaccagggaagtgatgatacagaacagaccccctcctct
tctggcgactccccgggggaggggtcggagacgctccggaacgactcggagtctggagac
gacctaagtagcagctctgctgaacacatgcagacgacgtctccggcggggcagggccgg
cctgagtcccctgtctacaccaacctccaagagctgaagatctcccagtccagcctgccc
ccccttccttcaagctccccactgcatgtcctcggggactgggagacccacaaggacctc
accggcagacacttctactataacaaagcctgcggcgagcgcacgtggaaaccgccccgc
gtacgggatgcgacttgcagtaccagtagtagtcggggagacccccatggcacaggagag
atggagcccctgtcttccgaggagaactgtcacagcagcaccaactccagtcagtcggac
agtcagtacggcacgccccctagaggctggtcggaggaactggacgaacacggacatacc
ctctatgtctgtgaatatactcatgagaagtggataaagcacgtggatgagcagggaagg
ccgtactactacagcgctgatgggtccaggtcagaatgggagctacccaaatacaacttg
tctcctccccagccaggcgatccccccaagagtcgtagtctggagcggaaacatccagac
cccatcgtcctgaccaagtggagacacagcacctacgtactagacctcaacgacaagttc
tctttcaaaaaactcaggcgctttgaatcgagccatcacatggggagatctggtcgcaat
ctttaccgtggtaaaccctctgagaagtgtggagtcctcaacgtcaccaaaatcactgag
aatggcaagaaagtcaggaagaactggacatcttcgtggacagtactccagggctcctca
ctgctcttcgctaaaggacaggggagtggcaccagctggccgcactaccgtagtggctcc
atccctgagctgctgctcactctgctggccaactggaagcgttcggtcaagccctgccca
gctgtctcctatgtccactctgtccatgggcgtgccccagctgccactaagtttgtgggt
aaccagtcgaagccggagttcactgtggatctcagaggggggtcagttgattgggcatcc
aaggataagtcaagcaagaagcacgtcattgaactgaagacccgtcaggggacggagctg
ctgatccaatcagagattgacagcgtcatcaacgactggtaccgagccctgacagacacc
atcagcacacatgcatgggagtcagatgaggccatagaggaggacatgcctgagtccccc
gggacagagaaacaagacaaggagaaggaccaccgagactccaagaaaaacagagcgatg
aagacgtctataagtatggactccactgaccagaaaaagactagagtgaagctgaagaag
ttcctgacccgccgacccacctaccaggccgtcaaggacaaaggatacattaaagaccag
gtgtttggctgcagtctgagcagcctgtgtcagagggagaacacgtcagtgcccaacttt
gtcaccacgtgcatcgaccacgtggagaccacaggtctgagtatagatggcatatacaga
gtgagtgggaatctagctgtgatacagaagctgcgcttcgctgtgaatcacgatgaacag
ttagaactggaggacagtaagtgggaggacatccacgtcaccacgggagccctgaagatg
ttcttcagagagctgcctgaaccactcttcacctacgactccttcaacgactttatcaac
gccatcaaatgctcggattacaagcagcgagtaaactcaataaaagacttaatcaagcag
ttgccaaaaccgaatcacgacacaatgcaatgcctcttcaaacatctcagaagggtgatt
gaccatggagaggccaaccgaatgacgacccagagcgtggcgatcgtcttcggtcctacc
ctgctcagacctgagaccgagaccgggaacatcgctgttcacatggtatatcagaaccag
attgttgagctcatcttactggagtatgagaacatcttcggcaggtag
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