Oncorhynchus keta (chum salmon): 118361204
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Entry
118361204 CDS
T09424
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118361204
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118361204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
GAS
DUF4472
Motif
Other DBs
NCBI-GeneID:
118361204
NCBI-ProteinID:
XP_052331260
LinkDB
All DBs
Position
2:complement(32037409..32126733)
Genome browser
AA seq
1919 aa
AA seq
DB search
MESEVFTPLLEQFLLTPLVAWVKAAGHSSGNDGTKLSEYIELLDGIYLNEIMLEINPKAT
VQRTNKKVNNDSTLRIQNLSILIRQIKSYYQETLQQLVAMPLPNVLVLGRNPLSEQGLEE
MRKLLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLEGGD
LPPEDLDSFSRNMAFHLKRLVDERDDQLETIVELTQERDCGLYSPPPLFAQSPNDSPSLR
RTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDCRQELDNMETENKRIQQESLQLLSD
ARSARAYRDELDNLREKAIRVDKLESEVGRYKERLHDIEFYKARVEELKEDNQVLLETKA
MLEDQLEGTRARSDKLHELEKESLQLKSKIHDMEMERDMDRKRIEELLEENLVLEMAQKQ
SMDESLHLGWELEQLSKTPDLTEVPQKSLGHEVNELTSSRLLKLEKENQALLKTMEELRG
SASEDAPAHRLKADKENQRLTQRLGQLESELNTGRESLCSAESLSTDLMKEKALLEKTLE
TLRENADRQVKGLEQENEHLTQTVSSLRQRSQVGAEARVKDVEKENRVLHESIRETSSKL
NKLEFERKQLRKDLEMYKEKGERAEELEVEAQRLERENEALQKRVASLGITCDKVVSLEK
ENSELEVEGRRLKKVVDGLRSTSFQLEALEKENSQLDEENLELRRTAEVLRSAGNKAAQL
ELENLELESERSQLKRSLELLKASSKKTERLEVSNQGLDTENQRLQKALDNSSRKMQQLE
GELQDVEQENQSLQRSLEELKISSKRLEQLEQENKTLEQESSQLEKDKKHLEKDNKRLRQ
QAEIRDSKMDEDNLRISHLEKDNRSLGKEMTSFKDSCNRLKDLEKENKELIKQATIDKKT
LVTLREELVSEKLRTQQMNNNLEKLTHELEKIGLNKERLLQDEQSSDNDRYKLLEFKLES
TLKSTLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPR
RGDREDSQAVNKWEKESHETTRELLKVKDRLIEVERNNATLQAEKQALHTNLKQLETQSS
NLQAQILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSGTLMAQNAQLATQQSSTEN
EKEGAMREREDLRSTYEMLLRDHEKLAALHERQASEYEGLIGKHGGLKSAHKSLESQHRD
LEDRYNQLLRQKDQLEELEKQLKAEQEKMLSENKSHEATAIDYYKLKEENERLNMAHRQL
VKDNEGLQVDHKNLKSQMNGAKLEQTRLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYDPSPPRRRENWITLKMKKLIKPRSRERMRSLTLTPTRSESSEGFLALPLDSQD
SSSIGSGSNSLDDTLTQKRNSRKKDSQRVQHSHVQSNQGNQGSSNAVKWLPFMRNRSKEK
DKAKDIYRRSMSMNDLLQTIALAGGQWTGSTENLEGPVEANGGSRSRHMKELGSMAYSTN
AINYTTLTLPSGNRAKRSLKIKDNTSCEDVPASSDDPIGFRGQGLQVFSSAQAMSPSALD
PSAMCRVPCSICSSRASSLHSIKTISSNTSRSTPLEAKGTLNGNLSRPHSESSGEFSLSL
DQEEWSSGSSPVQQPLSHSSHQSSMLLQRSLDPQATQAKKKNGSASGSASEVLSLQQFLE
EHIDPAESGSQENLTESPRLSGGAEHVQRDQAERGSTGTKGRGILRSASGKAAPVNSDGR
PTRGGQPGHPSLRKAESTRVKGMVLPRVSLSSQSKAVSVSERLDISSSMLPRASSVISTA
EGSTRRTSIHDLLSKDTRQPVSVDPSPSSKALPRAYTTPNVEVLQERRKSKSSGEQQSS
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgaggtttttacgccattgttggaacaatttctgctcacgccattggtcgcc
tgggttaaggcggctgggcattcatcaggaaacgatggcaccaaactatcggaatacatt
gaattgttggatggcatttatttaaacgagatcatgcttgagataaatccaaaagccact
gttcaaagaaccaacaagaaagtgaacaatgactcaacactgcgcatacaaaacctctcc
atcctgatccggcagataaagtcgtactaccaggagaccctccagcagctggtggcgatg
cctctccccaacgtgctggtgctgggcaggaaccctctcagtgagcaaggtctggaggag
atgaggaagctgttgttgctgttgcttggctgtgctgtccagtgtgagaagaaagaagag
tacatcgagaggatccagacgctagactttgacacaaaagctgccatagcatctcacatc
caagaggtgacccacaaccaggagaatgttgtggacctacagtggctggaggggggtgac
ctgcccccagaggacctggactccttctccaggaacatggccttccatctcaaacgccta
gtggacgagagagacgaccagctggagaccattgtggagctgacccaggagagggactgt
ggactgtactctcctccgcccctctttgcccagtcgcccaacgactcgcctagcttgcgc
cgcacagagagccgccagcacctgtctgtggagctggccgacgccaaggccaagattaga
cgcctgcgccaggagctggaggagaagagtgaacagctgctggactgtagacaggagctg
gacaatatggagactgagaacaagaggattcagcaagagagcctgcagttgttgtcagac
gcgcgttctgccagggcctatcgtgacgagctggacaatctgagagagaaggccatcaga
gtggacaagctggaaagtgaagtgggacgctacaaggagaggctccatgacattgagttc
tacaaagctagagtggaggagctgaaggaggacaaccaggttctgctggagaccaaggcc
atgcttgaggaccagctagaaggaaccagggctcgctctgacaaactccacgaactggag
aaagagagcctgcagctcaaatccaagatccacgacatggaaatggagcgggacatggac
aggaagcgtattgaggagctgcttgaggagaacctggtgctagaaatggcccagaaacag
agcatggacgagtctctccacctgggctgggagctggagcagctctccaagacccctgat
ctgacagaggtgcctcagaagtctctgggccacgaggtgaatgagctgacgtccagccgc
ctgctgaagctggagaaggagaaccaggccctgctgaaaaccatggaagagctgaggggc
tctgccagcgaggacgcccctgcacaccgcctcaaggccgacaaggagaaccagaggctc
acccagaggctggggcagctggagagtgagctgaacacaggcagggagagtctgtgcagt
gcagagagcctcagcaccgacctgatgaaggagaaggctctgttggagaaaaccctggag
acactgagagagaacgcagatagacaggtgaaaggcctggagcaggagaacgagcatcta
acccagactgtctcgtcactgaggcagcgctcccaggtgggcgctgaggcgcgggtcaaa
gatgtggagaaggagaaccgcgtgctgcacgagtccatccgggagaccagctccaagctc
aacaagctggagtttgagcgcaaacagctgcgtaaggaccttgagatgtacaaggagaag
ggcgagagggctgaggagctggaggtggaggcgcagcggctggagagggagaacgaggcc
ctgcagaaacgagtagccagtctgggcatcacctgtgacaaggtggtgtctctggagaag
gagaactccgagctggaggtagagggccgtcgtttaaagaaggtggtggacggcctgcgg
agcacatccttccagttagaggccctggagaaggagaactcccagctggatgaggagaac
ctggagcttcgcaggactgctgaggtgctccgctcggcagggaacaaggcggctcagctg
gagctggagaaccttgagctggagagtgagaggagccagctgaaaaggagcctggagctg
ctcaaggcctcctccaagaaaacggagaggctcgaggtgagcaaccagggcctggatacg
gaaaaccagcggctgcagaaggccctggacaacagcagccgcaagatgcagcagttggag
ggggagctgcaggatgtagagcaggagaaccagagcctgcagaggagcctcgaggaactg
aagatctccagcaaacgtctggagcagctggagcaggagaataagactctggagcaggag
agctctcagctggagaaggacaagaagcacctggagaaggacaacaagaggctgagacag
caggcggagatcagggactccaagatggacgaggacaacctgaggatcagccacctggag
aaggacaaccgctcgctgggcaaggagatgacctccttcaaggactcctgcaaccgcctc
aaagatctggagaaggagaacaaggagctgatcaaacaggccaccatcgataagaagaca
ctagtcactctacgagaggaactggtgagtgagaaactgcggactcagcagatgaacaat
aacctggagaaactgacccacgagctggagaagataggcctcaacaaggagaggctgctg
caggatgagcagagctctgacaacgacaggtacaagctgctggagttcaagttagagtcc
actctcaaatctactctggagatcaaggaggagaagatagcagccttggaggccagactg
caggagtcctccaacctcaaccaacaactgcgccaggagctcaaaactgtaaagaagaac
tatgaggccttgcgacagagggaggaggaggagaggatggtgcagagctcaccccccaga
agaggggacagggaggactctcaggcggtcaacaagtgggagaaggagagccacgagacc
acccgggaactgctcaaggtcaaagaccgcctcatcgaggtggagagaaacaatgccacc
ctacaggcagagaagcaggccctgcataccaacctgaagcagctggagacccagagcagt
aacctacaggctcagattctggctctacagagacagactgcatctctacaggagaacaac
accacactacagacccagaatgccaaactacaagtggagaactccaccctgaactcccag
agcggcactctcatggcccagaatgcccagcttgcgacacagcagtccagcacggagaac
gagaaggagggggcgatgagggagagggaggacctgaggtccacctatgagatgctactg
agggaccatgagaagttggctgccctgcatgagaggcaggcctcggagtatgagggcctc
attggcaaacacggaggcctgaaaagtgcccacaagagcctggaatcacagcacagagac
ctggaggacaggtataatcagctgctgaggcagaaggatcagctggaggagctggagaaa
cagctgaaggcagagcaggagaaaatgctgtctgagaacaagagccacgaggccacggct
atagactactacaaactgaaagaggagaatgaaaggctgaacatggcacaccgccagctg
gtgaaggataatgagggcctgcaggttgaccataagaatctgaagagccagatgaacggt
gccaagctggaacagacccgcctggaggcagagttctccaaactcaaagagcagtaccag
cagctggacatcacctccaccaagctcaccaaccagtgtgagttgctgagtcagttgaag
gggaacctggaggaggagaaccgtcacctgctggaccagatccagaccctgatgctgcag
aaccgcaccttgctagaacagaccatggagagcaaggacctgttccacgtagaacagaga
cagtacattgacaagctgaatgagttgaggagacagaaggagaagcttgaagagaagatc
atggaccagtacaagttttatgacccctctcctccacggagacgagagaattggatcacc
ctgaagatgaagaagctgatcaagccgaggagtcgggagcggatgcgttccctgacactg
acgcccacgcgctccgagtccagcgagggcttcctggcgcttcctctggacagccaggac
tcttcctccataggctctggctccaactccctggacgacacgctgacacaaaagaggaac
agcaggaagaaagactctcagagagtgcagcactcccatgtgcagagtaaccagggtaac
caaggttcctctaatgctgtgaaatggttgccctttatgaggaacagatcgaaggagaaa
gacaaagcgaaggacatctaccgccggtccatgtccatgaatgacctgctgcagaccatt
gccctggcagggggccagtggacgggcagcacagagaacctggaggggcccgtggaggcc
aacgggggcagccgaagtcggcacatgaaggagctgggctccatggcctactccactaac
gctatcaactacaccaccctcactttgccctctggcaacagggccaagaggagcttgaag
atcaaagacaacacttcctgtgaagacgttccagcatcctcagacgaccccattgggttc
agaggtcaaggcctacaggtctttagcagtgctcaggctatgtcgccctctgctctcgac
ccgtccgctatgtgcagagtcccctgtagcatctgttcctcacgagcctccagcctccat
agtatcaagaccatcagcagtaatacctcccgctccactccgctcgaggccaaaggcacg
ttgaacggaaacctcagcaggccccacagtgagagcagtggggagttcagcctcagtctg
gatcaggaggagtggtccagcgggagcagccctgtccagcagcccctgtcccactcctct
caccagagctccatgctgctgcagaggtccctggacccccaggccacacaggccaagaag
aaaaatggcagcgcctcaggcagcgccagcgaggtgctctctctacagcagttcctagag
gagcacatcgaccctgcagagtctggcagccaagagaatctgactgagtctccccgcctt
tccggaggcgctgagcatgtgcagagagaccaggccgagcgaggctccaccggcactaag
gggcggggcatcctgcgctcagccagtgggaaggcagcgccagtgaactccgatggccgc
cccaccaggggtggccaaccaggtcatcccagcttacgaaaggcagagagcacgcgtgtg
aagggcatggtcctgccacgggtcagcctctcctcccagagtaaagccgtgtctgtgtct
gagcgtctggacatctcctcctccatgctgccccgggccagcagcgtcatatccacagcc
gagggctccacacgtcggaccagcatccatgacctgctgtccaaagacacccggcagccc
gtgtctgtggacccctcaccctcctcaaaggccttgcctcgcgcctacaccacgcccaat
gtggaagtgttacaagagcgcagaaagtcaaaaagcagtggggagcaacaaagctcctaa
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integrated database retrieval system