KEGG   Oncorhynchus keta (chum salmon): 118361234
Entry
118361234         CDS       T09424                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X2
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke00310  Lysine degradation
oke01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oke00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    118361234 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118361234 (plod1a)
Enzymes [BR:oke01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     118361234 (plod1a)
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118361234 (plod1a)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 Glycos_transf_2
Other DBs
NCBI-GeneID: 118361234
NCBI-ProteinID: XP_035596889
LinkDB
Position
28:36672380..36688171
AA seq 732 aa
MRAFSLLILAWMSLLVVLPVIRCKEQRELSEGNLLVVTVATKETDGFRRFMRSARHFNYT
IKVLGRGEPWKGGDYMTEPGGGQKVRLLKAGLQEMEEDKVVLFIDSYDVVFASGPKELLK
KFQQTRHKVVFSAETLIWPDRHLEDKHPHFREGKRFLGSGGFIGYVPNLKEMVADWTGED
SDSDQLFFTKIYINPEKRKSINITLDNRCRMFHNLHGSLDEVVLKFEDGQVRARNVLYDT
LPVIIHGNGPTKLQINYLSNYIPTVWTFETGCSVCLEDLRPLSGLKESEYPLVVIGIFIQ
QPTPFVSVFFETLLKLEYPKNRLKLFIYNQEQHHEVVVSSFLKDHGKEYQDVKVIGPEEN
LDRVASRNLGLDMCRQDKDCEYFFSMDIEVVLKNKDTLKILIEQNEPIIAPMITREGRLW
TNFWGALSADGYYARSEDYVDIVQGRRVGVWNVPYLTKVYLVKASLLHEELSNNDLFSSG
TLDLDMAFCHNARNKGVFMYVTNMHTFGRMLSTENYQMSHLHNDLWQIFENPKDWEERYI
HENYTKIMRDKLIETPCPDVYWFPLFSDIGCDHIVQEMENFGQWSGGRNTDTRIQGGYEN
VPTIDIHMTQINYEKEWQKLLLDYIAPITETMYPGYYTKCISYLNFVVRYKPDEQPLLTP
HHDASTFTINVALNSKEIDYEGGGCRFIRYNCSVEAPRKGWALMHPGRLTHYHEGLRTTA
GTRYIAVSFVDP
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagagctttttccttattaatattggcctggatgtccttgcttgtggttttaccagtg
atacgttgtaaagaacagcgagaactatccgaaggcaaccttttagttgtgactgttgcg
accaaagagacagatggcttcaggcgtttcatgcggtctgcccgacactttaactacact
atcaaggtgcttggcagaggggagccatggaaaggtggggattatatgaccgagccagga
gggggtcagaaagtgcgccttcttaaagctggtttgcaggagatggaggaagacaaggtt
gtcctcttcattgacagctatgatgttgtcttcgcctccggtcccaaagagctgctgaag
aagttccagcagacaagacacaaggtggtcttctctgcagagaccctcatctggcccgac
agacacttggaggacaagcacccccacttccgagagggaaagaggttcttgggctcaggg
ggattcattggctatgttcctaacctcaaagagatggttgctgactggacaggggaggac
agtgacagtgatcaacttttcttcaccaagatttatatcaacccagagaaaagaaaatcc
atcaatataacactggacaacagatgccgaatgtttcataatcttcatggatcccttgat
gaggtggtgttgaagtttgaggacgggcaagtgcgggccagaaatgtgttgtatgataca
ttacccgtcattattcatggcaacgggcccaccaagctccagatcaactacttgagcaac
tacatccccacagtgtggacgtttgagacgggatgcagtgtgtgtcttgaggacctgcgg
ccactctcaggactcaaggagagcgaatacccactggtggttattggaatcttcatccag
cagcccaccccctttgtcagtgtgttctttgagaccttgctcaaactggaatacccaaag
aaccgactcaaactcttcatctacaaccaggagcagcaccacgaggtagtggtcagctct
ttcctgaaggaccatgggaaagagtaccaggatgttaaggtcatcgggcctgaggagaac
ctggacagggtagcttcccgcaacctcggccttgatatgtgccgacaggacaaggactgt
gagtatttcttcagcatggatatcgaagtggttctgaagaacaaggacaccctaaagatt
ctcatcgagcaaaatgagcctataattgcacccatgataacccgagaaggccgcctgtgg
accaacttctggggagcactcagtgctgatggttactacgctaggtcggaggactatgtg
gacattgtgcaaggacgcagagttggtgtgtggaatgtcccttacctgaccaaggtgtac
ctggtgaaggccagcctccttcacgaggagctctccaacaatgacctcttcagctcgggc
actctggacctcgacatggccttctgtcacaacgccagaaacaaaggagtcttcatgtat
gttacgaatatgcacacctttggacggatgctgtcgacagaaaactaccagatgagccat
ctccacaacgatttgtggcagatctttgaaaaccctaaggattgggaggagcgttacatc
catgagaactacacaaagataatgagagacaaactgattgaaacaccttgccctgatgta
tactggttcccgctattctctgatatcggatgtgaccacattgttcaagaaatggaaaac
tttggacagtggtcaggtggccgaaatacggacacaaggatccagggtggctatgagaat
gtccccaccattgatatccacatgactcaaatcaattatgagaaagagtggcagaagctt
ctgttggattacatagccccaatcacagagacaatgtatcctggatactacaccaagtgt
atctcttacctcaacttcgtagtgaggtacaaacctgacgagcagcccctgctcaccccg
caccacgatgcatctactttcactattaatgtagctctcaacagcaaagaaattgactat
gagggtgggggatgcaggttcatacggtataactgctccgtcgaggcaccccgcaaaggc
tgggccctcatgcaccctggacggctcacccactatcacgagggcctgcgaaccactgca
ggcactcgatacatcgcagtgtcatttgtggacccctga

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