Oncorhynchus keta (chum salmon): 118361355
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Entry
118361355 CDS
T09424
Symbol
pcbp2
Name
(RefSeq) poly(rC)-binding protein 2 isoform X1
KO
K13162
poly(rC)-binding protein 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04216
Ferroptosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04216 Ferroptosis
118361355 (pcbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118361355 (pcbp2)
03041 Spliceosome [BR:
oke03041
]
118361355 (pcbp2)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118361355 (pcbp2)
mRNA cycle factors
Common to processing body (P body) and stress granule
118361355 (pcbp2)
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
118361355 (pcbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
118361355
NCBI-ProteinID:
XP_035597116
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All DBs
Position
28:41041219..41054296
Genome browser
AA seq
325 aa
AA seq
DB search
MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT
LAGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSQPPVTLRIVVPASQCGSLIGKGGCKI
KEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLEVSPPKGVTIPYR
PKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGHSLTKLHQLAMQQSPFPIAPNNQGFQAG
MDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGS
PASISLAEYLINARLSSEATGLAAN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggacactggtgtgattgaaggagggcttaatgtcaccctaaccattagactccttatg
cacggaaaggaagttggaagcattattggcaagaaaggagagtctgtgaagaagatgaga
gaggagagtggtgctcgtatcaacatctctgaggggaactgcccagagaggatcatcacc
ctggcaggccccaccaccgccatctttaaagccttttccatgatcatcgagaagctggag
gaggacatcagcagctcgatgactaacagcacggccaccagccaaccgccagtcaccctg
cgcatcgttgtgcctgccagccagtgtggctccctcatcggcaagggcggctgcaagatc
aaagagatcagagagtcgacaggagctcaggtacaggtggcaggggacatgctgcctaac
tccacagagcgtgccattaccattgcagggaccccccagtccatcatcgagtgtgtcaag
cagatttgtgtcgtcatgctcgaggtatctccgcctaagggtgtaaccatcccttacagg
cccaaaccctcaggctctcctgtcatatttgcgggaggtcaggcatacgctgtccaagga
cagcacgccattccacagcctgacgtaagtgaaggtcattctcttactaaactccaccag
ctggccatgcagcagagccctttccccatcgctcccaacaaccagggtttccaggctggg
atggatgcttctgcacaaactggttcccatgagctgaccattccaaatgatttgattggc
tgcatcattggccgtcagggggctaagatcaatgagatccgccagatgtccggggctcag
atcaagattgccaacccagtggagggctcttctgacaggcaggtgaccatcaccggctcc
cctgccagcatcagcctggctgagtacctgatcaacgccaggctgtcatctgaagctact
ggactggcagccaactga
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integrated database retrieval system
