Oncorhynchus keta (chum salmon): 118361440
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Entry
118361440 CDS
T09424
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118361440
Spliceosome [BR:
oke03041
]
Common components
Common spliceosomal components
General mRNP proteins
118361440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
118361440
NCBI-ProteinID:
XP_052373131
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MADDFDVEAMIEAPYKKDEIKSSSANGNEERSSKKKKRSHRRNSRSPSSDKCYSKDGKKS
PEKKGSRSKERRRSGSRSREHAGRYRGRQGPFWKRSRSRSPLKKDKSPVRKPIDNLTPEE
RDAHTVFCMQLAARIKPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFLDVNSVPL
AIGLTGQRLLGVPIIVQAPQAEKNRAAAMANNLQKGNAGPMRLYVGSLHFNITEDMLRGV
FEPFGRIESIQLMNDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTER
TEPSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPLAAQQALQMSGSIHSTP
IHFNMAAGTDIQASLNPPPEAPATLSLNLAPSMNQAMTLSTQPLATHCLQLSNMFNPQLE
KEPGWDVEIQDDVIEECNKHGGIVHIYLDKNSPQGNVYMKCPTIPTAMAAVNALHGRWFA
GKMITAAFVPFPTYHNLFPDSVTAAQLLMPVRQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgactttgatgttgaggctatgatagaggctccatacaaaaaggatgaaata
aagtcctctagtgctaatggaaatgaagagcgcagtagtaagaagaaaaagaggagccat
cgtaggaatagtcgcagcccgagctctgacaagtgctacagcaaagatgggaagaagagt
ccggagaagaaaggcagccgcagtaaagaacgccgacgcagtggttcccgtagcagggaa
catgctggacgctacagaggacgccagggccccttttggaaacgctcaagaagtcgtagc
cccttgaagaaagacaagagtccagtaaggaaaccaattgacaacctgaccccagaggag
agggatgcccacactgttttttgtatgcagctggcagccagaatcaaaccacgagaccta
gaggacttcttctcagccgtggggaaagtgagagacgtgaggatgatctctgacagaaac
tccaggaggtcaaagggcattgcctacattgagtttctggatgtgaattcagtcccgctg
gctattggcttaactggtcagagacttctaggagtgcccatcatcgtacaggcccctcag
gctgagaagaacagagctgcagcaatggccaacaaccttcagaagggtaatgctggccct
atgcggctgtatgtgggctcgctacacttcaacatcacagaggacatgctgcgaggtgtc
ttcgagcctttcggaagaattgagagcatacaactgatgaatgacagtgaaactggacga
tccaaaggatatggtttcatctcgtttgcagatgcagagtgcgccaagaaggccctggag
cagctgaatggctttgagctggccgggcggcccatgaaggttggtcacgtgacggaacgc
accgaaccctccaccgccagctccttcctggacaacgacgagctggagaggacaggcatt
gacctgggcaccaccgggcgcctgcagctcatggcccggctggcagagggtactggtctt
cagatccccctggctgcacagcaggctctacagatgagtggttccatccactcgactcca
atccacttcaacatggcagctggtacagacatacaagccagcctgaacccaccacctgaa
gctcctgcaaccctttcactgaatctggctccaagcatgaaccaggccatgaccctctca
acgcagccactggctacgcactgcctacagctgtccaacatgttcaaccctcagttggaa
aaggaacctggctgggatgtcgagattcaagatgacgtcattgaggagtgcaacaaacac
ggtggaattgtccacatataccttgacaagaactcccctcagggcaacgtgtacatgaaa
tgcccgacaatcccaacagcaatggctgcagtgaatgcgctacatgggcggtggtttgct
ggtaaaatgatcactgcagcgttcgtaccttttccgacctaccataacctttttcctgat
tcggtaactgcagcccaattattgatgcctgtgcggcaatga
DBGET
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