Oncorhynchus keta (chum salmon): 118361472
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Entry
118361472 CDS
T09424
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118361472
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_14
PDZ_6
LRR_4
PDZ_2
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
118361472
NCBI-ProteinID:
XP_052339101
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All DBs
Position
28:complement(44908920..45036981)
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AA seq
1973 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEHLD
LGSNELDVLPDTLGALPNLRELWLDRNQLSSLPLELGNLQRLVCLDVSENRLEELPSELS
GLLALTDLLLSHNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGDVPDELGGCASLNVLSLRDNRVAKLPAELADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDESTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWIDSNLNRVSVIQFQEETTKQDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEEKRNEAYISCPDGEPESPGTEVQHTTEKRLSNLSNQSHDSAASNSTASANSH
EERLCVITTARESLVGGRGEQEEEELDEMEVEYVEPTVHFAEEPIYQGGNEDGEDEEGGD
GVPCSDLEEQRLQFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLAQH
PTSHHPDPEKEEEEEEECMVTPQRHNRIEEPKQEERSLLHVNSSLQPVKGVSFDQVNNLL
IEPARIEEEEHTLTILRQTGGLGISIAGGQGSTPYKGDDEGIFISRVSEEGPAAQAGVKV
GDKLLEVNGVVLQGAEHHTAVEALRSSGAAVSMSVLREHMVEPENAITTTPLRPEDDYFP
RERRASGLPFCIEAGSPAGFRHRLSACLVRNDKGLGFSIAGGKGSTAYRTGDMGIYISRI
AEGGAAHRDCTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGTPG
GSPGLSRARAHSPPPPEPSDSPDQEEGNDDSSLLPHGSQPLEDEYPIEEVALVKAGGPLG
LSIVGGSDHASHPFGINEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQEAV
KALLSNKQEIRMLVRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIF
ISKVSSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLVMLVCDGFDPG
NSASVEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMVRETSQWERE
EMEKVERMRLEREEDTRLLEEETENLGTGPLKLDYRTLAALPTTALQKVNRLSPSVSATA
PMEAPIQAQCSFTLEPLGFDLGQPPTSLFPLPHALPQSGPIMNTEAGPFYMSQHSPSPLI
TASNQGAARQEALPTGEDEEVVVLVDSQPINFTENPFLVANRRGKGCPPSERILSGPPVG
YGSAGKLQPWLFSKAPSTEPPRTDSPIRDAPYSPTTQPASIHFTPTALPAKEEISPLSPY
ETRPGAIQPLSRGGGRPITSPATPDGHSSPNPFQHGPSPINSQTFDLFGERNNVHHNQPS
PETPSPGGRDDLAQRSFRDRQKYFEIDMKQQAPDTKPKCRVSLVGADDLKKMREEEERRF
EQRAREYLMDEDDEEEDDLVKQMGVLKATGKVVLDGVEYKVEPVATPHRHCNTPPSYSAT
PPSYCGSSGPSLVDGKGDSQRNSLEESFKLEQQRPNSMTGLIPVYPGESGAPIRTAKAER
RQQERLRMQSPELAPAGDKDLSPSEKRALEAEKRAMWRAARPYGLEEDVRQYEQDLAKRL
YQSRVRASQGTAPPPQSQNAAASSAASQLRMKSLEQDALKAQMVIAKSREGKKRGTLDQL
AESPSPTLTPSPTPLEDFSPQGVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSLDVVE
DIQFIDDGSSNPVHAADPGTEVPTATSALEMALYSNTRQLRQGCRSLETAVPT
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgttgtaaccgccacgtcgagtcggtggacaagcga
cattgtaatttgcaaaatgtccccgacgagatatttcgctacagccgcagtctggaggag
cttctcctcgacgctaaccaactccgagaactacccaagcctttcttcagacttctgaac
ttgcggaaactgggtctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaatgacattcctgagatccccgagagc
attaagttctgcaaggcattggagattgcagacttcagtggaaaccccctctccaagttg
cctgatggtttcactcagctcagagggctcgcccacctggcacttaacgacgtgtcattg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcactctctttcctggtgaaactggagcatctggac
ctgggcagcaatgaactggatgtgttgccggacacacttggtgctctccctaacctacgg
gagctgtggttggaccgcaaccagctctcctctttgccactagagctggggaacctgcag
agacttgtgtgtctagacgtgtcagagaaccgactggaggagttgccctcagagctcagc
ggcctgctggccctcactgacctgctgctctcacacaacctcctggaggtggtccctgac
agcataggctctctgaagcagctgtccatcctgaaagtggaccagaaccgactgacccac
ctgagtgactccataggagagtgtgagaacctgacggaactcgtactgaccgagaaccta
ttacagactctgcctcgctcgctgggcaagttgaagaagctgacaaacttgaatgtggac
cgcaaccggctgggcgacgtgcctgatgagctgggtggttgcgccagcctcaacgtgctc
tctctcagagacaatcgcgtggccaaattgcccgctgagctggctgacgccactgagctt
catgttctggatgtggcagggaacaggttacagaacctgccatttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggacgacgagagcaccggggagaaggtgctcacctgctacctgttgccccagcagccc
tcccccagcctggagaacctgctgcagaacagtgtggacgacagctggatagacagcaac
ctgaaccgggtgtctgttatccagttccaggaggagaccaccaagcaggatgaggacgat
gaggcggctgcagagcgcaggggtctccagcgccgggcgacgccccaccccagtgagctg
aaggtcatgaagaaggtgattgaggagaagaggaacgaggcctacatatcctgtcctgat
ggagagccagagtctcctggtactgaggtacaacacaccactgagaaacgactgagcaat
ttgtccaatcagagccacgactctgcagcgtccaacagcacagcctctgccaactctcac
gaggagagactgtgcgtgattaccacagcgagggagagcctagtgggtgggcgtggtgaa
caggaggaggaagagctagacgagatggaggtggagtatgtggagcccacggtgcacttt
gcagaggagcccatataccagggtgggaatgaggacggtgaggacgaggagggtggggac
ggggtcccatgcagcgacctagaggaacagaggctccagttccctacggagaagcagcgt
ctgatcaggaaggacacgccgcactacaagaagcacttcaagattaccaagctgccaaaa
cccgaggcggtggccgcgttactgcagggcttcagccccgacgcacacctggcccaacac
cccacctcgcaccaccctgaccccgagaaggaggaagaggaagaggaggagtgtatggtt
actccacagcgccacaacagaatagaagagccaaagcaggaagagaggagtctgcttcat
gtcaactcttccctgcagccggtcaagggggtgtcatttgatcaagtcaataatctcctg
attgagcctgctcgaattgaggaggaagagcacaccctgaccattctacgtcaaactggg
ggcctgggcatcagcatagccggaggacagggatccacaccctacaagggggatgatgag
ggaattttcatctccagggtgtctgaagagggccccgcagcgcaggctggggtcaaagtg
ggagacaaactcctagaggtgaacggtgtggttctccagggggcagagcaccacacggcg
gtagaggccctgcgcagctcgggcgccgccgtctccatgagcgtcctccgggagcacatg
gtggagccggagaacgccatcaccaccacaccgctaaggcccgaggacgactacttcccc
cgggagagacgggccagtggccttcccttctgcattgaggcaggctcccccgcaggcttc
cgacacaggctgtctgcctgcctggtccgcaatgacaagggtctgggcttcagcattgcc
gggggcaaaggctccacagcctaccgcacgggggacatgggaatctacatctcgcggatc
gcagagggaggggcggcccacagagactgcacactccgagtaggggacagggtcatcacc
atcaatggcgtagacatgaccgaggccaggcatgaccaggcagtagcgctgcttaccggc
acctctcccaccattgctctcctggtggagcgtgaccaggccgagccgggcaccccaggg
ggctccccgggcctgtcccgtgcccgcgcccactcccccccacctccagagccctctgac
tcacctgaccaggaagaaggcaacgacgactccagcctcttgccccacgggagccagccg
ctggaggacgaataccccatcgaggaagtggcgttggtgaaagcgggcggccccctggga
ctgagcatcgtgggaggcagtgatcacgccagtcacccgttcggcatcaacgagcctggc
gtcttcatctctaaggtgatcccacatggcttggcgtgtcagagtgggctgcgggtgggg
gacaggatactggaggtgaacaccatcgacctgcgccacgccacccaccaggaggctgtt
aaagccctgctctccaacaagcaggagatccgcatgctggtgcgcagggacccctcgcct
cccgggatggaggagatagtgatccagaagcagcctggagaaaagctgggcatcagcatc
cgcggcggtgccaagggccacgctggcaaccccttcgatgccaccgatgagggcattttc
atatccaaggtgagctccagcggtgcggcggccagggatggccgtctgcttgtgggcatg
cggatcttggaagtgagtaaccacagcctgctgggcatgacccacacggaggctgtacgc
gtgctccgcgccgtgggagacaccctggtcatgctggtgtgtgacggcttcgaccctggc
aactctgcctctgtagaggcgtcaccgggcatcattgccaacccgtttgccgcaggcatc
gtgcgtaagaacagcatggagagcatctcctctatagaccgagacctgagtcccgaggag
atggacatcctacagaaggaggtggagatggtgcgagagacgtcccagtgggagagagaa
gagatggagaaggtggagcgcatgcgtttggagcgtgaggaggatactcgcctgctagaa
gaggagaccgagaacctgggcactgggcctctgaaactggactaccggacgctggccgca
ctgcccaccaccgctctccagaaggtcaacaggttatctccttctgtcagtgcaactgcc
cccatggaggcccccattcaggcccaatgttctttcaccttagagcccctgggttttgac
ctggggcagccccccacctccctcttccctcttccccatgctctacctcagtccggcccc
attatgaacacagaggcagggcccttctacatgtcccagcactctcccagtcccttgata
accgcctccaatcaaggagcagctagacaagaagccctgcctactggtgaagacgaggag
gtggtggttctggtggactcccagccaatcaacttcaccgagaaccccttcctggtggcc
aatcgcaggggcaaaggttgccccccctctgagcgcatcctctcagggcctcctgtgggc
tacgggagtgcgggaaaactgcagccctggttattcagcaaggcgccctccactgagccc
ccaaggacagacagtcccattagagacgccccctactcaccaaccacacaaccggcaagc
attcatttcacccctactgcactgcctgccaaggaggaaatctcaccactgagtccctat
gagacaaggccaggtgccatccagcccctctcccgtggtggcgggcggccgatcacctcg
ccagccactccggacggacacagcagccccaatcccttccagcatggcccctcccccatc
aactctcagacctttgatctgtttggcgagaggaacaacgtccaccacaatcagccttct
ccagagactccatcacctggtggcagagacgacctggcgcagcgctccttcagggacaga
cagaagtactttgaaatcgacatgaagcagcaggcgcccgacaccaagcccaaatgccgc
gtttccctggttggagcagacgacctgaagaagatgagggaggaggaagagaggagattc
gagcagcgggcacgggagtacctgatggatgaagatgacgaggaggaggatgacctggtg
aagcagatgggagtgttgaaggccacgggcaaagtggtgctggacggggtggagtacaag
gtggagcctgtagccaccccccacaggcactgtaacacgccccccagctacagcgccaca
ccccctagctactgtggcagctcagggccctcgttagtggatggtaaaggagactcccag
aggaattccttagaggagagcttcaagctggagcagcagaggcccaactccatgactggt
ctgatcccagtgtaccctggagagtcgggggctcccatccggacagccaaggcagaacgg
aggcaacaggagcgcctgaggatgcagagtccagagctggccccagctggagacaaggac
ctctccccctccgagaaacgggctctggaagccgagaagagagccatgtggagggcagca
aggccctatggcctagaggaggatgttaggcagtatgagcaggacctggctaagaggctc
taccagtcgcgagtgagggcatctcagggcaccgcgccaccccctcagtcccaaaacgcc
gccgcctcttccgctgcctcccagctcaggatgaagtctctggagcaggatgctttgaag
gctcagatggtcatcgctaagtcccgggagggaaagaagcgtggcacactggaccagctg
gccgagtcgccctcgcccaccctcacgccatcccccacccctctggaagatttcagtcca
caaggagtaacgtcaccaggcagactgtccctgtcggaaaagaagtttgactaccgacag
tttgctgccattccttcttccaaacccgtatacgacatccagtcccttgacgtggtcgag
gacattcagttcattgacgatggctccagtaacccagtgcatgctgcagatcccgggact
gaggtgcccactgccacctcagcactggagatggccctctacagcaacacgcgccagctg
aggcagggctgccgcagcctggagaccgccgtgcccacataa
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