Oncorhynchus keta (chum salmon): 118361480
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Entry
118361480 CDS
T09424
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118361480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118361480
03036 Chromosome and associated proteins [BR:
oke03036
]
118361480
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118361480
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118361480
PBAF complex
118361480
GBAF(ncBAF) complex
118361480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
118361480
NCBI-ProteinID:
XP_035597343
LinkDB
All DBs
Position
28:complement(45376039..45454855)
Genome browser
AA seq
553 aa
AA seq
DB search
MATEDTAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYSGSPTVRPGL
PTPVMEPSRKRPAPSQQNQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVELLTSKAKRFSLPKDNILKGSRARLLVESWHRTPTTQETDGFQVKRPGDVSVR
CTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDK
YFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLK
SQMSSFLLSTANQQEIASLDNKVGQPHRKDSQSQLPKMTLKIHETIESINQLKIQRDFML
SFSRDPKGYIQDWLKSQSRDLKMMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCKIQQR
RQELEQALAVRNT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggacacggcggggggggcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccatctggagctaggatgccccaccagggt
gcccccatgggcccccccggccccccgtacagtgggagccctacggtgcggcccggcctg
cccaccccggtcatggagcccagccgcaagagacctgccccctcccagcagaaccagcag
cagcagaacgtacagaaccgggccagaaagaagccagtgggattccctggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattctcccacagaggatccgtgagctggtccct
gagtcacaggcttacatggacctgcttgccttcgaacgtaaactggaccagaccatcatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcccgacgctgacgactcggatggc
agtattgcatcatgggagctgcgggttgaggggaagctactggatgatcctgggaagctg
aagaggaaattctcctctttcttcaagagcctggtgatcgagctggacaaagacctatac
ggtcctgacaaccatcttgtagagctgctgaccagtaaagcgaagcgattcagccttcca
aaagacaacatactcaaagggtcgagagcaaggctgctcgttgaaagttggcaccgcact
cccaccacccaggagacggacggcttccaggtgaagcggccaggggacgtgagcgtgcgc
tgcacactgctgctaatgctggactaccagcccccccagtttaaactggaccctcgtctg
gctcggctgctgggtatccacacccagacccgctcctgtatcatccaggccctgtggcag
tatgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaactgtgacaag
tactttcagcagatctttgactgcccgaggctcaagttctcggagatcccccagcgtctc
accaacctcctcctgccccctgaccccatcgtcatcaaccacgtcatcagtgtggaccct
aatgaccagaagaagacggcatgctatgacattgacgtggaggtggaggaccccctgaag
agccagatgagcagcttcctgctctccaccgccaaccagcaggagatcgcctcattggac
aacaaggtgggacaaccacacaggaaggatagccaatcacaattacccaagatgacctta
aagatccatgagaccattgagtccatcaaccagttgaagatccagagggactttatgctc
agcttctccagggatcctaaaggctacatccaggactggctcaagtcccagagcagagac
ctgaagatgatgacagacgtggtggggaacccagaggaggagaggagggcggcgttttac
cacgagccctggtcccaggaggccgtcagtcgctatttctactgcaagatccagcagagg
agacaggagctggagcaggccttggccgtgaggaacacctaa
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