Oncorhynchus keta (chum salmon): 118361482
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Entry
118361482 CDS
T09424
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118361482
04121 Ubiquitin system [BR:
oke04121
]
118361482
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118361482
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
118361482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
CTD
Motif
Other DBs
NCBI-GeneID:
118361482
NCBI-ProteinID:
XP_035597351
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All DBs
Position
28:complement(45455726..45485439)
Genome browser
AA seq
1121 aa
AA seq
DB search
MAECSVTDSLDLNPDGPSSRQKPNQQQSRRGRARVDHNRTWSSPNNYVPLPQQQQEHFHH
GVKSSHDNVLVNFHPPPHHREDVQRGRGRGGNGSCGGGGRGSRGRNPRWNRPGVEIGTGP
LGLPGGPHGLVGGGYRPGTLHMERGPPIDGPSWRRDPGGRGGEVGPAHEDHQDTRPKKPR
RFSQEPRRGERSSKGPLHSLDKQENQENHATGGGGGGWDPVEPREETRSLEIGTRNRKGG
RTEDRNPHLDPRKKFQEPKRSQGPIKEYPQERKEPERGASGRDILPAHHDKLGPSTEEEP
NWRGQGKCTPLQDRGQRRTPKYDYRPGQKRGDNMPNKSKETQTGCLIEQLSEEKYECMVC
CEVIRVMAPVWSCLSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNTYK
CFCGKVTNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPPCPAFVTKACICG
RTSQPMRCGQATAIHCDKQCDLILNCTEHTCTQACHSGLCQPCQLQVQQVCFCGVVYREV
LCGTDKDCFDGSGHFSCQKACGKMLDCEAHRCKQVCHRGPCQLCPRSPRLVRNCPCGQTA
LAKLLELGYPERRSCSDPIPSCGKTCNKPLPCGSNETIHICEKLCHEGCCGPCTLTSTIK
CRCGSKINDVPCATIQNEDGLIFTCEKRCLKKRSCGRHKCGELCCVGVEHTCSLVCGYKL
NCGLHRCQELCHRGNCQPCWQTSFDELACHCGVTVLFPPIACGTKPLECKNLCTRRHKCD
HQVFHNCHGEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLTCNKVLLCDLHRCRR
ICHRGECLAKGACRQPCVLPRADCGHPCNAPCHKGTSCPRNTCAAKVALQCDCGRRKETV
VCTEAASAHQRYAAIAMASKLSDMQLGDSVDIGLITKKEMKQAKLECDEGCAALERNRRL
AVALQSYPSVDPFNIRTSSSTYSDSLRGDARKDLKFVSEVEEEIKNLVELASKGKLSKRS
HCFPPMNREHRKIVHELSEVYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLIERDT
GVSRAPPPIAHIKQHSKTDGVSSWSKAVKEEPAIDYFDVQD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgctcagtcacagactctctggatttgaatccagatgggccttcatcacga
cagaaaccaaaccaacaacagtccaggaggggtcgagccagagtggaccacaaccgtact
tggagtagtcctaataattatgtcccactgccgcagcagcagcaagaacattttcatcat
ggggtcaaatcatctcatgacaatgtcctagtaaacttccatcctcctccccaccacaga
gaggatgtacagaggggtcgaggaagagggggtaatggaagttgtgggggaggtggccgg
ggctcaaggggccggaatccgaggtggaataggcctggggttgaaattggcactgggccc
cttggcttacctgggggcccccatggacttgttggtggaggctacaggcctggaacactc
cacatggagaggggaccccccattgacgggcctagctggcgtcgagaccctgggggccgg
gggggagaggtggggcctgcccacgaagaccaccaggacacccggcctaaaaagccccgg
cggttcagccaggagccacggagaggagagaggagctctaaaggacctcttcactctctg
gacaagcaggagaaccaggaaaaccatgctacaggaggagggggaggaggctgggatccg
gttgagcccagagaagaaacccgatcattagaaattggaaccagaaaccgtaaaggcggt
aggaccgaggacaggaacccccatcttgaccctcgaaagaaattccaagagccaaagcga
agccaggggccgatcaaagaatatccccaggagaggaaggagcctgaaaggggagccagc
ggcagagacatcctccctgcccatcatgacaaactgggccccagcactgaagaagagccc
aactggaggggtcaggggaaatgcacccccctgcaggacagaggccagaggagaacaccc
aaatatgactacaggcctgggcagaagaggggggacaacatgcccaacaagagcaaggag
acacagaccggttgcctgattgagcagctgtccgaggagaagtatgagtgcatggtgtgc
tgtgaggtgatcagggtgatggcacctgtctggagctgtctcagctgcttccatgtcttc
catctcaactgcatcaagaagtgggcccgctccccagcctcacaggcagacgaaacaaat
gatgggtggaggtgtccagcttgtcagaatgttgtcttccaacccccaaacacctacaag
tgcttctgtggcaaagtgaccaacccggagttccagcgtagcgagatcccacacagctgt
ggagatatgtgtgggaagaagaggagcggagcagactgcaagcacccctgtaacatcttg
tgtcaccccggaccttgtccaccgtgtcctgcctttgtcaccaaagcctgcatctgtgga
agaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaagcagtgt
gacttgatcctcaactgtaccgaacacacctgcacccaggcgtgccacagcggactgtgc
cagccgtgccaactacaggtccagcaggtgtgcttctgtggtgttgtctatcgggaggtg
ctgtgtgggacggataaagactgctttgacggctcaggacacttctcctgtcagaaagca
tgtggcaagatgttggactgtgaggcccaccgatgcaagcaggtgtgccaccgtgggccg
tgccagctgtgcccacgctcccccagactggtgaggaattgcccctgtgggcagacggcc
ttggccaagctcctggagctgggctaccctgagcgccgcagctgctctgaccccatccct
tcctgtggcaagacctgcaacaagcccctgccctgtggatccaacgagactatccacata
tgtgagaagctgtgccacgagggctgctgtggcccctgcacactcacctccaccatcaaa
tgcagatgtggttcgaagatcaatgatgttccctgtgcaaccatccagaatgaagatgga
ctcatttttacctgtgagaagcgctgcctaaagaagcgctcctgtggccgacacaaatgt
ggcgagctgtgctgtgtgggtgtggaacacacatgctctctggtctgtggctacaagctc
aactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaaccctgctgg
caaaccagttttgatgagctggcgtgccactgtggggtgactgtcctgttccccccaatc
gcctgtgggaccaagcccttagagtgtaagaacctgtgtaccaggaggcacaagtgtgac
caccaagtgttccataattgccatggtgaggagaagtgcccaccctgtacttacctcact
cagaagtggtgcatgggaaagcatgagcgaaggagcaacattccgtgccacctgcaggac
atctcctgtggtctgacctgcaacaaggtgctgctgtgtgacctccaccgctgccgccgc
atctgccaccggggagaatgtctggccaagggcgcctgccgccagccctgtgtgctgccc
cgtgccgactgtggccacccctgcaacgccccttgccacaagggcaccagttgcccgcgc
aacacctgcgctgccaaggtggcgctacagtgtgactgtggccggagaaaggaaactgta
gtgtgcacggaggcagccagtgcccatcagaggtatgcagccattgccatggccagtaag
ctgtctgacatgcagctgggtgactctgtagacatcggtctcatcactaagaaggagatg
aaacaggccaagttggagtgtgatgaagggtgtgctgcactggaaaggaacaggcgattg
gctgtggccctgcagagttacccttcagtggaccccttcaacatccgcacctcctcctcc
acttatagtgacagcctccgaggagatgccagaaaagatttgaagtttgtcagcgaggtt
gaagaggagatcaagaatctggttgagttggccagcaagggtaaactgtccaagaggagc
cactgcttccccccaatgaacagagagcacaggaagatagtccacgagctgtctgaggtc
tacaatgtagagagcgtgagctacgacagcgagcccaaacgcaacgtggttatcaccgcc
atcagggggaagtctgcctgtcctaactcaacactgacgtccctgatagagagagataca
ggggtctcaagggctcccccacccattgcccatatcaaacaacatagcaagactgatggt
gtgagcagctggtccaaggcagtcaaagaagagccggcaatcgactacttcgatgttcag
gattaa
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