Oncorhynchus keta (chum salmon): 118361543
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Entry
118361543 CDS
T09424
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial-like isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118361543
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oke01007
]
118361543
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118361543
Enzymes [BR:
oke01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
118361543
Amino acid related enzymes [BR:
oke01007
]
Aminoacyl-tRNA synthetase
Class II (U)
118361543
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118361543
Prokaryotic type
118361543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
118361543
NCBI-ProteinID:
XP_035597449
LinkDB
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Position
28:complement(49707169..49825982)
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AA seq
529 aa
AA seq
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MWHIFGLLKTIHRSTVVKGSWKDSGQRVTRTETQLYPLPRSSHPTDREPKVFRTIHPGEV
HGAGTMRLHCRILPLFLPILKPLAHHRPLCCLPANGRPTTAPRLFPSPCHLTTDVPSSQP
LVGQDTTVKVMGYSYPRDDFTNVTSKILAKVGCNLHNQAHHPIWLIKERIKAHFYRAYIM
RSGNPLFSVHDNLSPVVTTEQNFDSLLIPPDHPSRKRGDNYYLNRGTMLRAHTSAHQREL
VCSGLDAFLLAGDVYRRDEIDASHYPVFHQMEGVRLFSNHELFAKVSSGEDLSLFESGGH
RTPQKQETHTLEAVKLVEFDLKQTLDRMVRHLFGEELEIRWVECYFPFTHPSFEMEVRFQ
EDWLEVLGCGVMEQELVHSAGVSNKMGWAFGLGLERLAMVLYGIPDIRLFWSQDDRFLKQ
FCLPSIHDPVTFQPLSKYPPLINDISFWLPAEGYTENDFYDLVRSIGGDLVEKVTLVDQF
KHPKTQKHSHCYRITYRHMERTLTQEEVRVLHAAIEHTAEQELGVKGRY
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatatcttcggtcttctcaaaacaatccaccgttccacagtggtaaaaggcagc
tggaaggattcaggccagagggtgaccagaactgaaacacaactataccctcttcctcgc
tcctcccatcccacagatcgtgagcccaaagtcttccgtaccattcaccctggagaggtc
catggagcaggtaccatgaggctgcactgcaggatccttcccctcttcctccctatcctc
aagcccctagcacaccataggccgctctgctgcctcccagccaatggcaggccaaccaca
gcccccagactcttcccctccccctgtcacctgaccactgatgtcccctcctctcagccc
ctggttggccaagatacaactgtcaaagttatgggctactcctaccctcgtgatgacttt
accaacgtgaccagcaagatcctggccaaggtgggctgcaacctgcacaaccaagcccac
catcctatctggctcatcaaagagcgaatcaaagcccacttctaccgtgcctacatcatg
cgctctggcaacccgcttttctcggtccatgacaacctcagtccggtggtgacaacggag
cagaactttgacagcctgctcatcccgcccgaccaccccagccggaagcgaggcgacaac
tactacctcaaccggggcaccatgctgcgagctcacacgtccgcccaccagagggagctg
gtgtgctcggggctggacgccttcctgctggcgggtgacgtgtaccgaagggacgagatc
gacgccagccactaccctgtgttccatcagatggagggggtacgcctcttctccaaccac
gagttgtttgccaaggtgtcgagtggagaggacctgtctctcttcgagagcggggggcac
cggacccctcagaagcaggagacacacactctggaggcggttaagcttgtggagtttgat
ctgaaacagaccctcgaccgtatggtcagacacctgtttggagaagagctggagatccgc
tgggtggagtgttacttcccctttacccatccctcctttgagatggaggtgcgtttccag
gaggactggctggaggtgttgggctgtggagtaatggagcaggagctggtgcactctgcg
ggagtgagtaacaagatgggctgggcatttggactgggcctggagcgcctggcaatggtg
ctgtacgggatccctgacatccgcctcttctggagccaggacgaccgcttcctgaagcag
ttttgcctgcccagcatccacgacccagtcaccttccaacccctcagtaagtacccacct
ctgatcaacgacatctccttctggctaccggccgagggctacacagagaacgacttctat
gacctggtgaggagcatcggaggagacctggtggagaaggtcaccctggttgaccagttc
aaacatccaaagacgcagaagcacagccactgttaccgcatcacctaccgccacatggag
aggaccctgacccaggaggaggtgcgtgttctccacgccgccatcgagcacaccgccgag
caggaactgggcgtgaaggggaggtactga
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