KEGG   Oncorhynchus keta (chum salmon): 118361635
Entry
118361635         CDS       T09424                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118361635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118361635
Spliceosome [BR:oke03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118361635
 Complex B
    118361635
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 118361635
NCBI-ProteinID: XP_035597609
LinkDB
Position
28:complement(61212024..61228913)
AA seq 1016 aa
MADRTPGGTQKANAKALLESKLKSFSIGKMAVSKRTLSKKEQEDIKKKEDERAAAEIYEE
FLAAFEGGEGKVKAFVRGGIANATKEEAASDDKKGKLYKPKSRFETAAAPKSSFLPLETP
PQFLTLDKRHTLKKANEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLSGMEG
KRSSLDSSSRRNRPSSVLDDAAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNAKMIMNFEMKLGWGKGVPIPP
HPIYIPPSMVEHTLPPPPSGLPFNAQPCERLKNPNAALLPPPKNKEEFDKTLSQAIVKVV
IPTERNLLSLIHRMIEFVVREGPMFEAMIMNRELSNPMYRFLFENQSPAHVYYRWKLYSI
LQGEAPTKWRTDDFRMFKNGSLWRPPPLNPYLHGNFEEGEGPEEEEVEPGKKGCLKEEER
DQLEEMLRALTPRKGDIAEAMLFCLLHAEAAEEIVECVTESLSILKTPLPKKIARLYLVS
DVLYNSSAKVANASYYRKYFETKLCQVFSDLNATYKTIQGHLQSENFKQRVMSCFRAWED
WAVYPDPFLIKLQNIFLGLVNLSADKEAPAPITVEKPSVEHLAPGLLSQPESAEDIDGAP
IGEDMDGASLEDVDGVPIGLDGGTMVDGAPLGSAPLVSVPLDRALLGMDDLDGVPIKAPE
EDIDGVPLDHAAAKAASFKVAPSKWEAVDESELEAQAVTTSKWEIFEQPEEKKDEDDSDD
EDTKSSRSEEPPSYPNPIRDDLDSKTKHSEMNEDRRTKLREIEVKVMKFQDELESGKKPK
KSGQSLQEQVENYREKLLQKEKEKEKLEREKEREKKDKEKSEARSKDIKKEKESTPTRKD
RRGLSPVVARKRRHSGSPGSPPRSSSRRVRSPSPRSERSERLYSKDVGSSRSRSSHKDSP
RTTIIKKSSKRSPSLSRTPKRSRRSRSRTPKKSTKKSCSKSRSPHRSHKKSKKSKH
NT seq 3051 nt   +upstreamnt  +downstreamnt
atggcggacagaacgcctggtggtacgcagaaagccaacgcaaaggcgctgctggagagc
aagttgaagtccttcagcattggaaaaatggccgtgagtaagaggaccctaagcaagaag
gaacaagaggatatcaaaaagaaggaggatgagcgggcagctgcagagatctatgaagag
ttcctggctgcgttcgagggaggagagggaaaggtcaaggccttcgtccgggggggcatt
gctaatgcaactaaagaggaggctgcttctgatgataagaagggcaagctgtataaacct
aagtcacgctttgaaacagcagcagcaccgaaaagcagcttcctgcctttggaaacccct
ccgcagtttttaacattagataaaagacatacactgaagaaagcaaatgaaaaggaaaag
aagaagagtaatctagagctctttaaggaagaacttaaacaaatacaggaagagcgggat
gaaagacacaagatgaaaggcagagtcagtcgatttgaacctctctccgggatggaggga
aaacgctcctcattggatagttcttcaagaagaaaccgtccgtccagtgttttggatgac
gctgcacctggttcccatgacgtcggagacccctctacaactaacttatacctcggcaac
atcaacccacagatgaatgaggagatgctgtgtcaggagtttgggcgctacggccctctg
gccagcgtgaagatcatgtggccgcggacagatgaagagagggccagggagaggaactgt
ggctttgtggccttcatgaaccggagggatgcggagagagctctgaagaatctcaacgcg
aagatgatcatgaactttgaaatgaagctgggctggggtaaaggcgtgcccatcccccct
caccccatctacatccccccgtctatggtggagcacacactccccccgccgccctccggc
ctgcccttcaacgcacagccctgtgagaggctgaagaaccccaacgccgccctgctccct
ccgcccaagaacaaggaggaattcgacaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgt
gagggccccatgttcgaagccatgatcatgaatcgagagctcagcaaccccatgtacagg
tttctgtttgagaaccagagcccagcacacgtgtactaccgctggaaactctactccata
ctacagggagaagcaccaacaaaatggcggacggacgacttccgcatgttcaagaacggc
tcgctgtggcgccctcctcccctcaatccctacctgcacggcaattttgaggagggggag
gggcctgaggaggaagaggtggagcctgggaagaaaggctgcctaaaagaagaagagcgt
gatcagctggaggagatgttgagggctctgactcctagaaagggggacatagccgaagcc
atgctgttctgtctactgcacgccgaggctgctgaggagatcgtagagtgtgtcacagag
tccctctccatcctcaagacaccactccccaagaagattgcacggttgtatctagtctct
gatgtgctgtacaactcatctgctaaagtagccaatgcgtcgtactacagaaaatacttt
gagaccaagctttgccaggtcttctcagacctcaatgcaacgtacaagacgatacagggt
cacctgcagtctgagaactttaagcaacgagtgatgtcgtgtttccgtgcgtgggaggac
tgggccgtgtacccagatcccttcctcatcaagctgcagaacatcttcctgggtctagtc
aacctatcagctgataaggaggctcccgctcccatcacagtagagaaaccatcagttgaa
cacctggcccctggtctactgtcccagcctgagtcagcagaggacatcgacggggccccc
atcggggaggatatggatggggcctctctggaggacgtggatggggtccctatagggctg
gatggagggaccatggtggacggggcccccctaggctctgcccccctagtctccgtcccc
cttgacagagccctgctggggatggacgatctggacggagtgcccattaaggccccggag
gaggacatagacggagtgcccttggatcatgctgcagccaaagcagcatcctttaaagta
gcaccttcaaaatgggaagcagtggacgagtctgagctagaagcacaggccgtgaccacc
tctaaatgggagatctttgagcagccagaggagaagaaggacgaggatgacagtgatgat
gaggacaccaagagttcccggtcagaagagcctccgagttaccccaaccccatcagagac
gacttggactccaagaccaagcactctgagatgaatgaggacagacgcaccaagctccgg
gaaatagaggtcaaagtgatgaagttccaggatgagttggagtctgggaaaaagcccaag
aagtctggccagagtctccaagagcaggtggaaaactacagagagaaactcttacagaag
gaaaaagaaaaggagaaactggaacgagagaaagagagggagaaaaaggacaaggagaaa
agcgaagctcgctctaaagacatcaagaaggagaaggagtcaactccaaccaggaaagac
aggcgtggcctgtctcctgtggttgctaggaaacggcgccacagcggctcacccggcagc
cccccacggagcagcagtagacgggtgcgctccccatccccccgctccgaaaggtcagaa
cgcctctactccaaggacgtagggtcatcacgatcccgctcctcccacaaagactcccct
cgaaccaccatcatcaagaagtcctccaaaaggtctccctcgttatcccgcacgcccaaa
cggtcccggaggtcacgctccagaacacccaagaaatccaccaaaaaatcctgttcaaaa
tcacggtccccacaccggtcccacaagaaatcaaagaagagtaaacactga

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