Oncorhynchus keta (chum salmon): 118361667
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Entry
118361667 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p58/p45-like
KO
K14307
nucleoporin p58/p45
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118361667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118361667
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118361667
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
JAKMIP_CC3
Tox-ODYAM1
PSY3
PBC
Motif
Other DBs
NCBI-GeneID:
118361667
NCBI-ProteinID:
XP_035597677
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All DBs
Position
28:complement(63734685..63746409)
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AA seq
580 aa
AA seq
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MSGFNFGSGSIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGTLGATAPASTTTTSSLGLG
GSLFSQKPTGGFSFNTPASGAPAASTAPTTGFSMTFNKPSASAQPFSLTAASSAPTGAGL
TLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTGLGQTTLGSGGL
TLGSLASTSTAVSAAPSLGLGGVDFSTSSEKKSDKSSGASPQDSKALKDENLPPVICQDV
DNFQKFVKEQKQVHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGLQRNALAIDKLKMET
AQELKNADIALRTQKTPPGLQHDNTAPYDYFRCLVEQFEVQLQQYRQQIEELENHLTTQG
SGSHITPQDLSLAMQKLYQTFVALAAQLQSVHENVKTLKQQYLGYRRAFLEDSTDVFESK
RVASKKWQSAPRITTGPAPFSSIPNAAAVAMAATLSQQQQPGPGSQVSLGSGLGNPFALG
VGSSLGTSGLGVFGGGPGFGGVAXGGSSFGFSSASKPSGGSLSAGFGSNSSSGFNFSSPG
LNASAGLTFGVSNPPATGFGTGGPLLQLKKPPVGNKRGKR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcggatccgggtctattggttccaccaacgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggaactctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggc
gggtcactattctcacaaaaacctactggggggttctcctttaacactcctgcctcaggt
gccccagcagcctctacagcccctaccacgggcttcagtatgaccttcaataaaccctct
gcctcagcccaacccttctccctcactgcagcctcctcagcccccacaggggcaggactg
acactaggctcagtcctcacctccactgcgccacagcaaggagccacaggattctctctc
aacctagggggtgtggccgcaagtacagccccatccacaggtctatcgctgggttccagt
atgttctctaacatggctactactggtttgggccagaccactctcggatcaggggggttg
acgttaggttccctggcctctacttccacggcggtgtcagcggcccccagccttggactg
ggaggagttgacttcagcacctcctcagagaagaaaagcgacaaatcatcaggggccagc
ccacaagacagtaaagctttgaaagatgaaaatttgcctccagtcatctgtcaggatgta
gacaacttccagaagtttgtgaaggagcagaagcaggttcacgaggagatcagcaggatg
tcatctaaagccatgctgaaggttcaggacgacatcaagagtctcaaacagctgctatct
gtcagcgcttcgggactacagagaaacgccctggctatagacaaactgaagatggagact
gcgcaggagttgaagaatgcagacatagctctgcggactcagaagactccccctggactc
cagcacgacaacacggctccctatgattatttccggtgtttagtggaacagtttgaggtt
cagttgcagcagtacagacagcagatagaggaactggagaatcaccttactacacagggc
agtggatcacacatcacaccacaggatctgtcactggccatgcagaagttgtaccagacg
tttgtggctctggctgctcagctccagtcagtacacgagaacgtcaagaccctgaagcag
cagtacctgggataccgccgggccttcctggaggactccacggacgtcttcgagtccaag
cgggtggccagtaagaagtggcagagtgccccacgcatcaccactggccctgcccccttc
agcagcatccccaatgcggcggcggtcgccatggcagccacgctgagccagcagcagcag
cccggcccagggagccaggtgtccctggggtctggcttgggaaacccctttgccttggga
gtgggctctagcttgggcacctcaggtctcggagtgtttggtgggggtccaggtttcggg
ggggtagcgnacgggggctcctcatttggtttctcctctgccagcaagccctcgggaggg
agcctgagtgcaggttttggaagcaacagtagttcagggtttaacttcagtagccccggc
ctcaacgcgtctgcaggcctgacgtttggcgtgtccaaccctcccgccacgggcttcggc
actggaggtccactgctgcagctcaagaagcccccggtgggaaacaagaggggcaagaga
taa
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