Oncorhynchus keta (chum salmon): 118361831
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Entry
118361831 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: afadin-like
KO
K05702
afadin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
oke04520
Adherens junction
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118361831
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118361831
04530 Tight junction
118361831
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DIL
RA
PDZ
PDZ_2
PDZ_6
RA_2
RA_3
Motif
Other DBs
NCBI-GeneID:
118361831
NCBI-ProteinID:
XP_052341184
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All DBs
Position
29:37579557..37612687
Genome browser
AA seq
1285 aa
AA seq
DB search
MAGKEEWQRLADIIQHWNNTRLDLFEISLPCKNLEFHGVMRFYFEDHIAGNVATKCLRIS
SITTTGEVIETLSEKFRPDMKMLNTPYFLFEVHANKEERQLDLSEKPLVVQLNWNTHNRE
GRFVLKKDKDIWPLSIQDNSPEKKKGGMIQNFKRTLSRKEKKKEKKKTGDDAVNHSAKPN
GSTMRKENGQISASVPVEKSWANKDIVSNPDTTECKKSSTWRGMVRKHNQKQDYGTRNER
DQDNMDQLALPVGIKFRENSEDPFLSAVINYTNSSTVHFKLSPAYVLYMAGRFVLHRHYS
HSQETSQSHRPSEHAHRVTATVNKMVAMTEVVIQKQKSIAGAVAFWMANTSELLNFLKQD
RDLSPITLQAQENLAHLVYKAFKCLTQCLLADLSRHLPEFLIYPEGSQSPAGIEGVLQTL
MGAMSLLRRCRVNAALTIQLFSQLFHSISAWLLNRLLSPSPQGEACSLGLRSHYWGATLR
QRLSLVEDWAERQGLELAADCHLSRIIQVTMLLTMNKYSMQDSENIQNTCFKLNSLQLRT
LMTSYLYDTNEPRIAPGVIDRVVAAAEASADELLRSEGQDLQLEEGPDLHLPFLLPEEGY
SCDTVNGIPQGFREFLEPICRKGLCTLMSHPQSGGTWTIFFNRANYLFSVSFIXPLHREL
EVVTITLTKPLNSGMGVSIVAAKGAGQDNLGIYVKSIVKGGPADMDCRLTAGDQLLCVDG
HSLVGLSQERAAGIMMHTGSVVTLQVAKQGATCHGLAALLDEPPSVSTTALDGSGPTSSS
HAKPNGKALIVYDGMEQSSGPSGLWGNNSHGGNRRQREQTLLKNRQLYRSNPNMISPEGE
PVDPAIPTDSKITAVSTSNLLCSDMYQREYLTLPAPRSQDKKTVAFELPPQEPRVSFNLD
GQISNKRTLMRQALSQENLCMENDRPLVDNIHNAWNQNQQESYYTSFPMKPSISTHDIHY
NHTVSLSTKTQPSRHNTRYGYWRTPTSHDPSSAIQPIHIDIPATRLSNTQPRSPMTTFQQ
TPTLLPVKMNQNPEGKGQGQALFSNQKQESHYQLPAQHRQATCPPPSSVSMRQPQPSLSS
SQKIQQQQALRRVQTATSQLFPTQSKDTSLQRPPAKPQPGTTPGHQDQYFSMNKEPPSEG
NKSLSPDPWKRDAWEKQQKQQRLQVVDLLEQEIQDLQAKAQLTPEETDRLRRLNLEWQFQ
QRLQEFQQNGNDEDDDDEEEDRDTSTGENVQESNELNVNFDEKSSKEGQKENNFKGDATP
ENLTFKERQRLFSLGSNASIKVKAL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaaggaagagtggcagagattagctgacatcatccaacattggaacaacacc
cgactggacctgtttgagatcagtctgccatgcaagaacttagagttccatggagtaatg
cggttctactttgaggaccacattgcagggaacgttgccaccaagtgcctgcgtatcagc
agcatcaccaccactggagaggttattgaaacactgtcagagaagttcagaccggacatg
aagatgttgaatactccctatttcctgtttgaggtccatgctaacaaggaagaacggcag
ctggacctgagtgaaaagcctctggttgtgcagctgaactggaacacacacaaccgggag
ggccgcttcgtactcaagaaggataaggacatttggcctttatccatacaggacaacagc
ccagagaaaaagaagggaggcatgatccagaacttcaagaggacactgtcgaggaaagag
aagaagaaggagaagaagaagacaggagatgatgctgttaaccactcggcaaagcctaac
gggtccactatgaggaaagagaatgggcagatatcagcctctgtacctgtggagaagtcc
tgggccaacaaggatattgtttctaaccctgacacaacagaatgcaagaaaagttccacg
tggcgaggcatggtccgaaagcataaccagaaacaagactatggaacaaggaatgaaaga
gatcaggacaacatggaccaacttgcacttccagttggtattaaattcagggaaaattcc
gaggaccccttcctctctgcagtcatcaactacaccaacagttccactgtccacttcaag
ctctcccctgcctacgtcctgtacatggccggacgcttcgtcctccaccgccattatagt
cacagtcaggagacatcacagagtcatcgcccctcagagcacgcacacagagtcaccgct
actgtcaacaagatggtagccatgactgaggtggtcatccagaagcagaagtccatagct
ggtgctgtagccttctggatggccaatacctcagagctcctgaacttcctaaagcaggac
agagatctaagccccatcactctgcaggctcaggagaacctggcacacctggtgtacaaa
gctttcaagtgtttgactcagtgtctgctggctgatctgagcagacacttgccagaattc
cttatttatcctgaggggagtcaatcacctgcaggaatagagggcgtactgcaaaccttg
atgggtgccatgtctctgctgcgtcgctgtcgagttaacgctgccctcaccatccagctg
ttctcccaactcttccactccatcagtgcctggctcctcaacaggctgctgagccccagc
ccccagggagaggcctgctccctgggccttagatcccactactggggggccaccctccgc
cagaggcttagcctggtggaggactgggcagagaggcaaggtctggagctggccgcagac
tgccacctcagccgcatcatacaggtaacaatgctgttgaccatgaacaagtattccatg
caagattcggagaacatccagaatacctgcttcaagttaaactccttgcagcttcgaaca
ctgatgacaagctacctgtacgataccaacgagccccgcattgcccctggtgtgattgac
agggtggtggcggctgcagaagccagtgctgatgagttgttgcgtagtgaagggcaggac
ctccagctggaggaggggccagacctccacctgcccttcctgctccctgaggaaggctac
tcctgtgacacggtcaatggcatcccgcagggcttcagagagttcctggaacctatctgc
cgcaaaggcctctgcactctgatgtctcacccccagtctggtggcacctggaccatcttc
ttcaaccgagcaaactatctcttctctgtttctttcatttagccactgcatagagaactt
gaggttgtgactattacactgacaaaacccttgaacagtggaatgggggtcagcatcgtg
gcggccaagggagcaggacaagacaaccttgggatttatgtcaagtctatcgtcaaagga
ggaccagcagacatggattgcaggttaactgctggggatcagttgctgtgtgtggatgga
cacagtctcgtgggcctctcacaggaaagggcagcaggcataatgatgcacactgggtca
gttgtgactttacaggttgccaagcagggggcaacatgccatggtctggctgccttgcta
gatgaaccaccttcagtatcaactacagctttggatggtagtggccccaccagcagcagc
catgctaagccgaacggcaaggccctgatcgtgtatgatggcatggagcagagctctggg
ccctcaggactatggggtaataactcccatggagggaacaggagacagagagaacagacc
ctgctgaagaacagacagctataccgctccaaccctaacatgatcagcccagaaggagaa
ccagttgacccagccatcccaacagacagtaaaatcactgcagtctccaccagcaacctt
ctgtgctctgatatgtaccaaagggaatacctgactctaccagcccctaggtctcaggac
aagaagacagtagcctttgaactcccacctcaggagcccagagtctcatttaatctagat
ggacagatctccaacaagaggaccttgatgcggcaggccctttcacaggagaatttgtgc
atggagaatgatcgccccctagtggacaatatacataatgcatggaaccagaaccagcag
gaaagctactacacctcttttcctatgaagcctagcatctctacccacgacatacattac
aaccatactgtcagcctctccactaagacccaaccgagccgccacaatacacggtatggc
tactggagaactcctacgtcacacgacccttcgtctgccatccagccaatacacatagac
atccctgctacacggctttccaacacccagccgcgcagtccaatgactaccttccaacaa
actcccactctactgcccgtgaagatgaaccaaaaccctgagggtaaaggccagggacaa
gccctcttcagcaatcaaaaacaggagtctcattatcaactgccagcccagcatcgccaa
gctacatgtcctcctccatcctctgtgtccatgaggcaacctcagccctcactctcatcc
tcacagaagatccaacaacaacaagcattgaggagggtgcaaacagcgacgtcccaactg
ttcccaacccagtcaaaagacacatccctccagagacctccagctaaaccacaaccaggg
accaccccaggacatcaggaccaatacttcagcatgaataaagagccaccatcagaaggc
aacaaaagtctgtctccagacccatggaagagggatgcatgggagaagcagcagaagcag
cagagactacaggtcgtcgacctgttggaacaggagatccaggatctgcaggctaaagcc
cagctcacaccagaggagaccgacaggctccgtaggctcaacctggagtggcaatttcaa
cagagactgcaggagttccaacagaatggaaacgatgaggatgatgatgatgaagaagaa
gatagagacacgtcaacaggagaaaatgttcaagagtcgaatgaactcaacgtaaacttt
gatgagaagtcctcgaaagaaggccagaaagagaacaacttcaaaggtgatgcaacacct
gagaatctcacatttaaggagcgccaacgtctcttctccctcggatcaaacgcctccatc
aaagtcaaagccttgtaa
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