Oncorhynchus keta (chum salmon): 118361832
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Entry
118361832 CDS
T09424
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118361832
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118361832
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
118361832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
KNTC1_N
Synaptobrevin
WD40_like
PEP5_VPS11_N
CFAP43_N
RAB3GAP2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
118361832
NCBI-ProteinID:
XP_052342483
LinkDB
All DBs
Position
29:complement(37177027..37228680)
Genome browser
AA seq
1188 aa
AA seq
DB search
MKKFNIRKVLDGLAASSFSSASPQPGTSQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAVGTQSGAVRLFGRAGVECYCQHESGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYSYDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEFKTTR
AGDAFVVMSGGLSYDTGCRRACLTVMHGKSTALLEMNYPIVDFLTLCETPYPNDFQDPYA
VVVLLEKDLVVIDLRQIGYPIFENPYSLSIHKSPVTCVEYFADCPPEVIPALYSVGSWQK
RPGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
ALKDGKEEKPSTEIVDEDPYAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQL
LEVRMQCELDDVDSPDTAGEHPLTPSTPVHSSCPNQEGDPPETQPSTTDDGPRDNVPCLK
VRSSPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSSYGLVVFGNSNGLAVVDYLQKT
LVLNMGTSELYSPSDPYQRQPRSPRKKPQPSGALSDNNNGNNALEEKSNKSPTSVGSTSP
TNSDDEHKQERFIQKVKSKSRRFSKMVANDFAKMSRKICSPTEQKTDLEKRVRRQRSLPY
KKRFCCVKEGKEPRKSLSQQRTLSVPYLNSKDSLFSCSRSSSVTSIELESREAISSFHFS
ESFPRKTDSSGSPSLWVGTTQGTVLVLALSLPPTGDLRLQQPVRVSSCGTLVRLKGGILT
MAFLDSLGAVLPPSYEPWSEPNPQDEEEKEKARRRRLASPPPTQEGRDSQYAVVCSEKQA
KVVGLPSQSCFFKHNITESSFVLRADVVQMAAGLCLTCFCANGHIMALSLPSLRPLLDVN
YLPLTDMRIARTFCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPIETPEAP
NRGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLAR
ARIALDERGQKLGELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatattagaaaagtgctggacggcttggctgcttcttcattttcctct
gcatctccacaaccgggaactagtcaaaacgatgtgatccaagagacactacagtcggag
cattttcagctctgcaagactgtgcgccatggcttcccttaccaaccctcctccatggcc
tttgaccctgtgcagaagattctggctgtcgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcaacatgagagtggtgcagctgtcattcagctc
cagttcctggtcaacgagggggcgctagtcagtgccttagctgatgacagcgttcatctg
tggaacctgaggcagaagcagccagctatcctacacactctcaaattcaacagggagagg
atcaccttttgtcacctgcccttccagagtaaatggctgtacattggcacagagaaagga
aacatccacatcgtcaacgttgagtccttcacactctcaggctacgttatcatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagcgataac
cctatggacgagggaaagattttgattggatttgaatgtgggactgttgtgttgtgggac
ctgaaatgcaaaaaagctgactaccgctacagttatgatgaggctatccactcggtagcc
tggcaccacgagggcaaacagttcacctgcagccactcagatggaactctgactacatgg
aacgtacgcgtccctgccaagcctacaatcaccatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccgtgtaaacctatccttaaagtggagttcaaaacgacaaga
gctggggacgcctttgtggtcatgtctggaggcctgtcctatgacacagggtgcaggaga
gcctgtctgacggtgatgcatgggaagagtactgccctcctggagatgaactatcccatc
gtagacttcctcacgctctgcgaaacaccatatccaaatgatttccaggatccttatgcc
gtagttgtccttttggaaaaggatttagttgtcatcgaccttagacaaattggataccca
atatttgagaacccgtactctttgtcgatccacaagtctccagtgacgtgtgtagaatat
tttgctgactgccctcctgaagtcatacctgcactttactctgttggctcctggcaaaag
agaccgggttacagtaagaaggaatggcccataagtggtggtaactggggccaaggcaca
ctaagctaccctgagatcatcgtcactggacatgctgatggctcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctctaaaggatggtaaggaggagaagccgagcacggagatagtggacgaggatccctac
gccatccagaccttgtcgtggtgcccagagagcaggatgctgtgtgtggctggagtctct
gcccacgtcatcatctataggttcagcaaacaggaaataaccactgaggtggtgcagctg
ttggaggtgcgtatgcagtgtgagctggatgatgtggattctccagacaccgcaggagag
catcctctcaccccatctaccccagtgcactcctcctgcccaaaccaggagggagacccc
cctgagacccagccctccacaactgatgatgggccccgggataatgtaccatgcctcaag
gtccggagctcccctctgaagcagtctcctggttaccaggtggagctggtcattcagctg
gtctgggttagtggggagccgcctcagcagatcaccagcctggctgtcaactcctcatac
ggacttgtggtgtttggcaacagcaatggtctggctgtagtggactaccttcagaagacc
ctcgtcctgaacatgggcacgtcagagctgtacagtccctcagacccctaccagagacag
cctcggtcgcctcgcaagaaaccacagccgtctggagctctcagtgataacaacaatgga
aacaacgctttagaagagaaaagcaacaaatcaccaacgtcagtaggctctacgtcaccc
accaattcagacgatgaacacaaacaggaaaggttcatacagaaggtgaagtccaaaagc
agacggttttccaagatggttgccaatgactttgccaagatgtcaaggaaaatatgctcg
cctacagagcaaaagacagacctggagaagagggtgcgacgccagcgctctctcccatat
aagaagcgcttttgttgtgtgaaggagggcaaggagcccaggaagtctctctcccaacaa
aggactctctcagtcccttacctcaattccaaggacagtttgttcagctgctcgaggagc
tccagtgtgaccagtatagagctggagtcccgcgaggccatctcctccttccacttcagt
gagagtttccccaggaagacagacagcagtggcagtcccagcctgtgggtgggcactacc
cagggcactgttctggttctggccctaagcctgccacccacaggggacctgaggcttcag
caacctgtcagagtatcatcttgtggtactctggtcagacttaaaggaggtatcctgacc
atggctttccttgactcccttggggcggtcctccccccttcctacgagccgtggtcggag
cccaaccctcaggacgaggaggagaaggagaaggcgaggcggcgcaggctggcctctcca
ccccccacccaggagggtcgggacagccagtatgcggtggtgtgttcagagaaacaggcc
aaagtggtgggcctaccctcccagtcctgcttcttcaaacacaacatcacagagagctcc
tttgtgctgagagctgacgtggtgcagatggctgctggactctgcctcacctgcttctgt
gctaatggacacatcatggctctgagtctacccagtctcagaccactcctggatgtgaac
taccttcccctgacagacatgaggatagcccggaccttctgcttctccaacctgggccag
gccatgtacctcacctcccccaccgagatacagagaatcacatacagccaggagacctgc
gacaatctacaggaaatgatgggagagttgtttacaccgatagagacacctgaggctcct
aacagaggtttcttcaagggcctgtttgggggaggggctcagtccctggatagagaagac
ctgtttggtgagacggcagcgggaaaggcgtctcgtagcctggcgcagcacattcctggg
ccccagggcatggagggcatgaagggggcagcctcgggagtggtgggagacctggcccgt
gcccggatagccctggacgagagggggcagaaactgggcgagctggaggacagaaccgca
gctatgatggccagcgctgactccttctctaaacacgctcatgatatgatgctgaagtac
aaagataagaagtggtatcagctttga
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