Oncorhynchus keta (chum salmon): 118362016
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Entry
118362016 CDS
T09424
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04020
Calcium signaling pathway
oke04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118362016
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118362016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oke04030
]
118362016
G protein-coupled receptors [BR:
oke04030
]
Rhodopsin family
Others
Platelet activating factor
118362016
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
CitMHS
Bac_export_2
DUF3382
Motif
Other DBs
NCBI-GeneID:
118362016
NCBI-ProteinID:
XP_035598122
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Position
29:complement(8933852..8939154)
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AA seq
374 aa
AA seq
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MEMEEDMTVNTTVNISTVDKITFLDSEFRYTLFPVFYGVVFVLGLIANSYVLFVLQRLRN
AKAMNEIRIYMANLTVADLLFVCALPFWIGYYHHRGDWRYGDFLCRVTGAFFFINTYCSI
LFLAAISVNRYWAITRPLDAASSDHWRRGVAITAVIWALTLSMSVPYLLETGIQVDDGNV
SRCFEGYHDKTDDEKRTVATTHLIIVGCFILVFFLVVICNLLIARALLTQSPTQTRGSSS
SQLRGVKGQALQMLCAVVGVFVVCFLPHHVVQGPWTLAVLDIKEGWGRMDWGQRTRQWLN
DAHQVTLMLMGLNCLLDPVVYCFATRKFRLYIKDNLKKVGRGKGCSETAITHISMVECKN
VSQRLHSEQQQLKV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagaggacatgacagtgaacacgacagtgaacatatcgacagtcgataaa
ataacctttctggactctgagttccgttacaccctcttcccagtgttttatggtgttgtg
ttcgtccttggtctgatagccaacagttacgtgctgttcgtgctgcagcgcctgcgcaac
gccaaggccatgaatgagatccgcatctacatggccaacctgactgttgccgacctcctc
ttcgtgtgcgccctccccttctggattggctactaccaccaccgcggtgactggcgctac
ggcgacttcctgtgccgcgtcaccggcgcgttcttcttcatcaacacctactgctccatc
ctcttcctcgccgccatcagcgtcaaccgttactgggccatcacacgcccgctggatgcc
gcctcgtctgaccattggcgccgcggggtggccatcacggcggtcatctgggcgctcact
ctgtccatgtccgtgccatacctcttggagacgggcatccaggtggatgacggcaacgtg
tcgcgctgctttgagggctaccacgacaagactgacgacgagaagcggactgtggccacc
acccacctcatcatcgtggggtgcttcatcttggtcttcttcctcgtagtaatctgtaac
ctgctcatcgcccgtgccctgctcacccagtcccctacccagactcggggctccagttca
tcccagctccggggggtgaagggccaggccctgcagatgctgtgtgccgtggtgggggtg
tttgtggtgtgcttcctcccccaccatgtggtccagggcccctggactctggctgtactg
gatatcaaggagggctggggcagaatggactggggccagcggaccaggcagtggcttaac
gatgcccaccaagtcaccttgatgctgatggggctcaactgcctcctggaccctgtagtg
tactgcttcgccaccaggaagttccgcctgtacatcaaggacaatctgaaaaaggtgggg
aggggcaaaggatgctcggaaacagccatcacacacatttctatggtggagtgcaagaat
gtgagccagcggctccatagcgaacagcagcagctgaaggtttaa
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