Oncorhynchus keta (chum salmon): 118362033
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Entry
118362033 CDS
T09424
Name
(RefSeq) testican-1-like
KO
K08136
testican
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118362033
Proteoglycans [BR:
oke00535
]
Extracellular matrix (ECM) proteoglycans
Others
118362033
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GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
118362033
NCBI-ProteinID:
XP_052364612
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Position
4:complement(49180882..49485001)
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AA seq
470 aa
AA seq
DB search
MLFCLLPFAALLLRAEGRRGGTVVGNKNIGHAMDNDKWLSTVSQYDKDRYWNKFRDDDYF
KSYGPAKPINQETEARPSRHGEPGTKAHSNPGKRRTEEAPDATKDPCLKVRCPAHKVCFS
HDYQTAICTNINHKQPRHSVKPRKERLAHKHWAGAVAHGKCGPCPVIHPSPVCGSDGHTY
SSKCKLEFQVCTSGKSIALKCEGPCPCLPGQELVKPHRDKTEKTVCSDGDLHSLASRLKD
WFGVLHLDANRDLKTSANADSAAGRFDTSILPICKDSLGWMFNKLDMNYDLLLDQSELSA
IYLDKYELCMKPLFNSCDSFKDGKLSNNEWCYCFQKPDGLPCQNEMNRIQTQGRRKSLIG
AYIPRCSEEGYFKSTQCHGSTGQCWCVDKYGNEIAGSRKQGNPTCEEDQETSGDFGSGGG
VLLLDDQEEEPPRSGRSRQKQRRGRIHPRGAIEDDEDEEDDKDDEIGYVW
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctgtctgctgcctttcgcggctctcttgctgcgcgcagagggcaggcgcggg
ggaacggtggttggtaacaaaaacattggccacgcgatggacaacgacaaatggctcagc
accgtgtctcagtacgacaaggacagatattggaacaaattcagagatgatgactacttc
aaaagctatggtcctgccaagccaatcaaccaagagacagaggcgaggcccagcagacat
ggggaaccaggaaccaaagcccactccaacccaggaaagaggagaacagaagaggctccg
gacgccactaaagacccatgtctgaaggtgcgctgccctgctcacaaggtgtgtttcagc
cacgactaccagacagccatctgcaccaacatcaaccacaagcagcctagacacagtgtg
aaacccagaaaagaaagattggcccacaaacactgggcaggagcagtggcccatgggaag
tgtggtccgtgccctgtcatccaccccagccccgtgtgcggctctgacggccacacctac
tcctctaagtgtaagctggagttccaggtgtgcacatcagggaagagcatcgctctgaag
tgtgagggaccgtgcccatgtctgcctggtcaggaactggtcaaaccacacagagacaag
acagagaagaccgtctgcagtgatggggacctgcatagcttagcatccagactgaaggac
tggtttggagttctccacctcgatgccaaccgagacctcaaaacctctgccaacgctgat
tcagcggcaggacgttttgacaccagtatcctgcccatctgtaaggactctctgggttgg
atgttcaacaagctggacatgaactatgacctcctgctggaccaatcagagctcagtgcc
atctacctggataagtatgagctgtgtatgaagcccctgttcaactcctgcgactccttc
aaggacgggaaactgtccaacaacgagtggtgctactgcttccagaaacctgacggtctg
ccctgccagaatgagatgaacaggattcagactcagggtcgacggaagagtctcataggg
gcctatattccacgctgttctgaggagggttactttaagtcaacccagtgtcatggcagt
actggacagtgttggtgtgtggacaaatacggcaacgagatcgccggctccagaaaacag
ggcaaccccacctgtgaggaggatcaagagacctcgggggattttggcagcgggggtggc
gtccttctccttgacgaccaggaggaggagccacctcggagtgggaggagccggcagaag
cagaggcggggccggatccatcccagaggggccatcgaggatgacgaggacgaggaagat
gacaaagatgatgagattggctacgtctggtag
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