Oncorhynchus keta (chum salmon): 118362083
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Entry
118362083 CDS
T09424
Name
(RefSeq) protein Smaug homolog 2-like isoform X1
KO
K27396
protein Smaug
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118362083
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118362083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
118362083
NCBI-ProteinID:
XP_035598213
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All DBs
Position
1:complement(27405542..27426311)
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AA seq
682 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRASRTQARFLHICLEHWLADCTEIHILEA
EANNADIVSQWHQEPMEKAVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSYTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYPGPSSRPPSGPYHPRQGSDEWP
GSAEGLDPGHGWLDKPPSSSSSPAGQNGHMSFQGGMSSPINSNNAGMGQMGQPSPLKRSL
SLIPSSPQVCGADWLSQDDLGGRQAFDHAPLSPQSSVASSGSEQTEDQGSRNTFQEDGSG
MKDVPMWLKSLRLHKYAALFSQMTYEEMMILTEHHLESQVCHRLSQNVTKGARHKIALSV
QKLRERPSVLKSLEKDILEGGNLRNALQELQQIIITPIKVYSYSPPSVSHRDMEGTGSPS
DHSNPGEDKDLAQEGFQPHNPPPCDGESSATPISDRDIAGQFTRVMGKVCTQLLVSRPDE
ENISCYLQLIEKCLTHEAFTETQRKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWAYG
SNSLPTAGSVSAGGLARRGQRSFQLPPRGLTAGRMGLLSPGGIGVASPRHTLTSPTLPGQ
GRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLLFQQQECQVPGADLEINPTL
ESLCLSMTEHALGDGMDRTSTI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggcatcctgacggactggttcaagggctggaacgagtgt
gagcagacggtggcgctgttgtccctgctgaagagagcatctcgtacccaggcccgcttc
ctgcacatctgcctggagcactggctggcagactgcactgagatccacatcctggaggct
gaggccaacaatgcagacattgtgagccagtggcaccaggagcccatggagaaggcggtg
tccctgctgctgtcccacctacccctgctgcagccccgcaacagcgaggccaagtgtgag
tacatgaagctgctgcagaaggtgctgagctataccatcgagagcagcctgtttgtggag
gagagcagacagctgctgtcctacgccctcatccacccggccaccaccctggacgaccgc
acctcgctggccatgtggctcaaccacttggaggagcacctctccagcggctacccaggg
ccctcctcccggcccccctccggcccctaccacccccgtcagggttcagatgagtggccg
ggctccgcggagggcctggaccctggccacggctggctggacaagcccccctcctccagc
tcctcccctgcagggcagaatggacacatgtctttccagggcgggatgtcctcgcccatc
aacagcaacaatgcaggcatgggtcagatgggccagcccagtcctctgaagaggtccttg
tccctgatcccctccagtccccaggtctgtggcgcagattggctgagccaggatgacctg
ggggggcgacaggcctttgaccacgcccccctgtccccccagagtagtgtggcatcctca
ggcagcgagcagactgaggaccagggttccagaaacaccttccaggaggacggcagtggc
atgaaagatgtgcccatgtggctgaagagcctccgtcttcataagtacgcagcacttttc
tcccagatgacttatgaggagatgatgattctgacagagcaccacctggagtcacaggtt
tgtcatcgtttgtcacagaatgtgaccaaaggtgcgcggcacaagatagccctgagtgtc
cagaagctacgggagaggccaagcgttctcaagtctttagagaaggatatattggagggg
ggcaacctgcgtaacgccctacaggagctacagcagattatcatcacccccatcaaggtc
tacagctacagccctcccagtgtttcccacagagatatggaggggactggatccccctca
gaccactccaaccctggggaggacaaggacctggcccaggagggcttccagccccacaac
ccccctccctgcgacggggagtcctcagccacacccatctcagaccgcgacattgctggc
cagttcacacgtgtcatgggtaaagtgtgcactcaactactggtttccaggccggacgag
gagaatatcagctgttacctgcagctcattgagaaatgtctgacacatgaggctttcaca
gagactcagaggaagagactggtctcctggaagcagcaggttctcaaactgctccgcctg
ttcccaagaaaagccatgctggacatgcctgtgtaccgacagaaaggctgggcatatggt
tccaactccctccccacagcaggctctgtgagtgctgggggtctggcacgtagggggcag
aggtcattccagttgccccctcgtggcctcactgccgggcgcatgggtctcctgagtcca
ggtggcatcggggttgcctcccctcgccacaccctcaccagccccacactgccaggccag
ggcagacagaacctgtggtttgccaaccctggaggcagcaacagcatgccaagccagagt
cgcagctccgtacaacggacccactcactccctgtccacacctccccgcaaaccatgctc
ctgttccagcagcaagaatgccaagttccaggtgcagacctggagatcaaccccaccctg
gagtcactgtgcctcagtatgacagagcatgccttaggggatggaatggaccgaacatca
acaatatga
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