Oncorhynchus keta (chum salmon): 118362155
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Entry
118362155 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118362155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118362155
03021 Transcription machinery [BR:
oke03021
]
118362155
03036 Chromosome and associated proteins [BR:
oke03036
]
118362155
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
ARID
118362155
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118362155
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118362155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118362155
NCBI-ProteinID:
XP_052341349
LinkDB
All DBs
Position
29:complement(16756173..17085343)
Genome browser
AA seq
2347 aa
AA seq
DB search
MAAQVASAPTLTNNKNNTLSGNLGQEIHSGKSGGGNISRSGEMLRAVDGTNTMNNVDHHH
RNELNMVNSTYSPNNNSDTPEKDSGNNVTSSDSTTSPGGMETGLIENHKLKNVGSGDPPQ
HLTPPQQQSQFNPFPQHQQRQIPSNNNNNSQATRGESENHHHGGKEGVLGSQSEQQMLNK
VDGDHTCKPGERMGARYEHSNLGPTTNNIISQPQSSGGNGEFNNYYGTSRVGPCYDQHGG
QQSTGMGMMHSSGPNNMDPVHNSQEGYHNSHYNHYPGYRQGYCGAGYGMMSPSRQGSNML
IGPGSNTPASHVKAAMGAAACGSGGSVGGFQRFPGQSQHPTGATPTLNQLLTSPSPMMRG
YGSGYQDYNSPSAQQQDDIGLGKDMTSQYGSTTHGWPGQQRNHPSMSPGNGGPGISRPQV
ASKDFMAMKRSQLYGMGNNPYSQQQQGGPYPNQPYGSPTPHRYPMGLQGRGQVGIGGMQY
PQQQGPPQYGQQGIGGYSQQQQQLQGTTPGPYFSPPQNPTTPPSQPPYLPPHAPPQQEAP
RESYGGRSQQQAPGNPGKANQEDMGLISQDRPSSLPDLSGSIDDLPTGTEAGHSSAISAT
GSTSSQGEQSNPAQSPFSPHASPHLSGQGSGPSSSPVGSPVGSNQSRSGSGPISPVSGPT
TAPGSQMAPQTPGNMLDVTHPPLTQSPMPQERGFMSNMQRNQSGSQFAPPPQSGPSMSPH
PSPGPGGQMYPGMGPYPQGGSSGPYGPQGSQANQYGPQGNYPRPPNYGGTPSANYSSPGP
GSGITNSQGMNASSPMHGQGPGQPMGRSPGVGSRPYPNMAPSSPSMPQPAGPGMGPPSLG
NVNRKAQEAAAAVMQAAANSVQGRQGSYPGPGMNLMGTAGSGAPYNQSPGNNSGMGTPQG
PPYNMPPSGAVGMAVSGMMNPDGKQKTGGKEENMPTNEPPKLKDGHSGSQCVSQPTTPGA
MLVPSPLSPSPASLSSYHGDDSDSISSPVWPKTPSSPTQKLNSSTMTNERITRLYDMGGE
PERRGWVDRYLSFMEERGTPVPHLPAVGKKPLDLCRLYMAVREIGGLALVNKNKKWRELS
TNLSVGTSSSSASCLKKQYIQYLFAYECKVERGEDQPADSNTGTGGENRKQAKVQPPSPA
NSGSVQGPQTPQSSCSSSMAEMSGDLKPPTPATTPQGQVTPIPASRSSVVSVQDPFSEVS
DPAFQKRNSLPLVGSGGVYQQGVNMPPNMMMRMQYEKDPFVGMRKVAGGEPYMPGQMTSG
GIQDMYGRSTSGMGQRSPYPYGPGYERRPDHLMGMEGSMGPPGNQSNMGPSNSEGSIYSP
NRYPSQQRHEGYTQQYPGMSYGMHPSGMYPQQQRTMESMYGSPGKRHEGEMYGPPAKRHE
GEMYGPPAKRHEGEMYGPPAKRHEGEIYGPPAKRHEGEMYGPPAKRHEGEMYAMQYRGQQ
PDMYNHYTTGYSGPERRPMQGQFPYPSPYSRERMQASGQGQHPMGPQMMSGGPPSNNGVE
GPQGPNMWPSRTDMGYPYPNRQGAPSQVPPYGPMGRGDDLEGRPIQDGQWLGHGSHRQSS
YMSGGMTPMSSRQPPSAYQTSPSMANHLPRAPSPGSFQRSMEARMSPNKTVFMGSMKMPG
KPGMPMPGQGNGHPGQVAPNQLRDLNYPLGSVEATMPVFKPRRKITSKDTGTPEAWRVMM
SLKSGLLGESTWALDTINILLYDDRSVASFTLTQLPGFLELIVEYFRRCVMEIFGILEEY
EIGTIGQNTLLGAEACDQGEELTSEPEMDCEASPPEPEQEQEVERGETEKGEEKPVDITE
KMTAEGMSPLSATEPAPEGTKEESEAEMKVKKEEGEKEKEGEKKEKEGEKEKGKENEESE
KPTESKEASPYQAPSEHEPRPQQASKYDKFPVKILHKEDLIEDTTEQLGHVTEFTSGLLH
WQAGGGDSTAHIQAHFERRGEHPDRMDGEREECASLNKEKDTEGGKQTEMGITATIDDIL
CARLGALSEGHPTHSAPTYPFRLHQGGGHQHITLLEDEPRCLDEAPISTSSPWQDSLAKR
CLCVSNIIRSLSFIPGNDSDMSRHPGLVLILGRLLLLHHQHPERKRTPPSYQREDVQERG
LACSKDEWWWNCLATLRENTLVTLANISGQLDLSLYPETICLPILNGLLHWMVCPSAEAQ
DPFPSGTPHSPLTPQRLVLECLCKLSIQDNNVDLLLATPPFSRQEKLYATLVRYVGQRKN
QVYREMAVATLSNLAQGDSTAARAIAIQKNSVGNLMGFLEDGVSMAQYQQNPHSILHMAH
HPPMEPPSINMMCRAAKALLAMAKVEENRPEFVLYEGRILDISISSVLNQGVTSIICEVL
FQFVKKL
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcagcaccgacattaactaataataagaataacacattgtct
ggcaatttgggtcaagagatacattcggggaaatcaggaggaggaaatatatcgagatct
ggagaaatgcttagagctgttgatgggactaacacaatgaataatgttgatcaccaccac
cgaaatgagctcaacatggtcaattcaacttattctccgaataacaattctgacacaccg
gagaaggatagtggaaataacgtcacttcgtcagattcgacgacctctccgggggggatg
gaaaccgggttgatagagaaccataaactgaaaaatgttgggagcggagatcctcctcag
cacctcacaccgccgcaacagcagtcacaatttaacccgtttcctcagcatcagcagcgc
cagataccaagtaacaacaacaacaacagccaagccacaaggggagagagtgagaatcac
catcacggagggaaggagggtgttttggggagccagtcagagcagcagatgctaaataaa
gttgatggggatcatacctgtaaaccaggggagcggatgggtgctaggtatgaacattcc
aacttgggaccaacgaccaacaacatcatcagccagccccagagctcgggaggaaacggc
gagtttaataactactatggcacttccagagtagggccctgctatgatcaacatggcgga
caacaaagcacagggatggggatgatgcactcttcgggacccaacaacatggacccagtg
cacaactcccaagaagggtaccacaacagccactacaaccactatcctggctaccggcag
ggctactgtggcgcgggctatggcatgatgtccccgtccagacagggcagtaacatgctg
attggccctggcagcaacactccagctagccatgtcaaggctgctatgggagctgctgcc
tgcggttctggtggaagtgttgggggctttcagagattcccaggacagagtcagcatcct
accggggccaccccgacactaaaccaattactgacatctccaagtccaatgatgcgaggt
tatggaagtggctatcaagactataacagtccctctgcacaacaacaagatgacatcggc
ctgggcaaagacatgacttctcagtatggctccacaacccatggctggccagggcaacag
agaaatcacccgtccatgagtcctggaaacggagggccaggtatcagcagaccacaggtg
gcctctaaggacttcatggctatgaagcgctcccagctctatgggatgggcaacaacccc
tactctcagcagcagcagggtgggccctatcccaaccagccatacggatcgcccactcca
caccgatacccaatggggttgcaggggaggggccaggtgggcattggcgggatgcagtac
cctcaacagcagggtcccccccagtatggccagcagggtataggaggatacagccagcag
cagcagcaactgcagggaacgaccccgggaccctacttcagtcccccccagaaccctacc
acccccccttcacagcccccctacctgccaccccacgccccacctcagcaggaggctcct
cgggagagttacggaggcaggagtcagcagcaagccccagggaatcctgggaaggccaac
caagaggacatgggtctgatctcgcaggaccgcccctccagcctcccagacctgtctggc
tccatagatgacctccctacaggtacagaggctggtcacagttcagccatcagtgctaca
ggctccaccagtagccagggggagcagagtaacccagcccagtcacccttctcaccccac
gcgtcaccccatctgtctggtcaaggcagcggcccatcgtcctctcctgttgggtcccct
gtgggctccaaccaatcacgctccggctctggccccatctcccctgtcagcggcccaacc
acagcaccaggttcccagatggccccccagactcctggcaacatgttggatgttacccac
ccccccttgacccagtctcccatgcctcaggaaaggggctttatgtccaacatgcagaga
aaccagtctggctcccagtttgcaccaccacctcagtcggggccctccatgtcccctcac
ccctctcctggtcctgggggacagatgtacccagggatggggccctacccccaaggtggc
tccagtggcccctatggaccccagggatcccaggcaaaccagtatggaccccaaggaaac
tacccacgtccacccaactacggcgggacccccagtgccaactacagcagccccgggcca
ggctctggcattaccaacagccagggtatgaatgccagcagccccatgcacggccagggt
cccgggcagcctatgggccgcagtcctggtgtgggcagccgcccctaccccaacatggcc
cccagctcccccagtatgccccagccagccggccctgggatgggccctccttcactgggc
aatgtcaaccgcaaggcccaggaggcagccgccgctgtcatgcaggccgcagctaactct
gtacagggcagacagggcagctacccaggccctggcatgaacctgatgggaacagcagga
tctggagccccctacaaccagtcaccaggcaacaactcaggcatgggcacaccacagggt
ccgccctacaacatgccaccctcaggggccgtggggatggctgtgagtgggatgatgaac
cctgatgggaagcagaaaacaggtggcaaggaggagaacatgcccaccaatgaaccccca
aaactaaaggatggccacagtggatcccagtgtgtctcccagcccaccacccctggtgcc
atgcttgtcccctctcccctgtcccccagcccagccagcctgtcctcctaccatggggat
gacagtgacagcatcagcagccccgtctggccaaagactccctccagccctactcagaag
ctcaactcgtccaccatgactaacgaacgaatcacgcgcctgtacgatatgggtggggag
ccggagaggcgtggctgggtggaccggtacctgtccttcatggaggagaggggtacacct
gtcccccaccttcccgccgtgggcaagaagcccctggacctctgcagactctacatggct
gtcagggagatagggggcctagccctggtgaacaagaacaagaagtggcgtgagctgtcc
accaatctgagtgttggtacctccagtagctccgccagctgtctgaagaagcagtacatc
cagtacctgtttgcctatgagtgtaaggtggagcgaggagaggaccagccggccgacagc
aacactgggactgggggggaaaacaggaagcaggccaaggtgcagccgccctctcctgct
aactcagggtccgttcagggcccccagaccccccagtcatcatgcagcagctccatggca
gagatgtcaggtgacctgaagcctcccaccccagccaccaccccccagggacaggtcact
cccatcccagccagcaggagcagtgttgtgagtgtgcaggacccgttctctgaggtgagc
gacccagccttccagaaacgtaactctctccccctggtgggctctgggggtgtgtaccag
cagggggtcaacatgccccctaacatgatgatgaggatgcagtacgagaaggaccccttc
gttggcatgagaaaggtggcaggaggggagccctacatgccaggccagatgaccagtggt
ggcatacaggatatgtatggcaggtctacatcaggcatgggccagcgctccccctaccca
tatggaccaggctacgaaaggagaccagaccatctgatggggatggaggggagcatgggc
ccccccgggaaccagagcaacatgggaccttccaacagcgagggcagcatttactctccc
aacagatacccctcccagcagagacacgaaggctacacgcagcagtaccctggcatgtca
tatggaatgcacccctcagggatgtaccctcaacaacagcgcaccatggagagcatgtac
gggtccccaggcaagagacatgagggggagatgtatggccccccagcaaagagacatgag
ggggagatgtacggccccccagcaaagagacatgagggggagatgtacggccccccagca
aagagacatgagggggagatttacggccctccagcaaagagacatgagggggagatgtac
ggcccaccagcaaagagacatgagggggagatgtatgccatgcagtataggggccagcag
cctgacatgtacaaccactacaccactggttactctggacctgagaggaggcccatgcag
ggccagttcccctacccttccccctatagccgagagcgcatgcaagcctctggccagggg
cagcaccccatgggcccccagatgatgtccggggggccaccctctaacaacggagtggaa
ggaccccaggggcccaacatgtggccctccaggacagacatgggttatccctaccccaac
agacagggggcaccctcccaggtaccgccatacggtcctatggggagaggagatgatttg
gagggccgacccatccaggatggtcagtggcttgggcacggaagccatcgccagtcctcc
tacatgtcaggtggtatgacccccatgtcctcccgccagcccccctctgcataccagacc
tccccctccatggccaaccacctgccccgagcccccagccccggctccttccagcgctcc
atggaggcacgcatgtcccccaacaaaactgtctttatgggctccatgaagatgccaggc
aaaccagggatgcccatgccagggcagggtaatgggcacccaggccaagtcgcacctaac
cagctgagagatctcaactaccctctaggatctgtagaggccaccatgcccgttttcaag
ccacgtcgcaaaattacctcaaaagacactggaaccccagaggcgtggcgagtgatgatg
tctctgaagtcaggtctgctgggtgagagtacgtgggccctggacaccatcaacattctg
ctgtatgatgacagatctgtggcctccttcaccctcacacagttgcctggcttcctggag
ctgatagtggagtacttcagacgctgtgtgatggagatctttggcatcctggaggagtat
gagatagggaccatcggccagaatacccttcttggggctgaagcctgtgaccagggggag
gagctgacctctgaacctgagatggactgtgaggccagcccaccagagcctgagcaggag
caggaggtggagaggggggagacggagaagggggaagagaaacctgttgacatcacagag
aaaatgacagcggaagggatgtcacccctcagtgcaacggaaccagcccctgagggaacg
aaggaggaatctgaagccgagatgaaggtaaagaaggaagagggggagaaagaaaaggag
ggggagaaaaaagaaaaggagggggagaaagaaaaggggaaagagaatgaggagagtgaa
aagccaactgagagtaaggaagcctctccttatcaggctccttcagagcacgagccaagg
ccacaacaggccagcaagtacgacaaattccccgtcaagatcctgcacaaagaggacctg
attgaggacacgacagagcagctgggtcacgtgacagagttcactagcggactgctccac
tggcaggcaggcgggggtgattccaccgcccacatccaggcccactttgagcggagggga
gagcaccctgacaggatggacggagagagagaggaatgtgccagtctcaataaagaaaag
gacacagaggggggaaagcaaacagagatggggatcactgccaccatcgatgatatactg
tgtgcccggttaggggctttgtcagagggccaccctacccactctgcccctacctacccc
ttcaggctgcaccagggagggggccaccagcacatcaccctgctagaggacgagccccgc
tgtctggacgaggctcccatctccacatcctccccctggcaggactccctggccaaacgc
tgcctctgtgtgtccaacatcatccgcagcctctccttcatccctgggaacgactcagac
atgtcccgtcacccaggcctggtgctgatcctgggcagactgctgctgctccaccaccag
cacccagagaggaagaggacgccccctagctaccagagagaggatgtgcaggagcggggc
ctggcctgcagtaaggatgagtggtggtggaactgtctcgctacactcagggagaacacc
ttggtcactctggctaacatctctggccagctggacctgtccctctacccagagaccatc
tgcctgcccatcctgaacggcctgctccactggatggtgtgtccctctgccgaggcccag
gacccattcccctcaggcaccccccactcgcccctcaccccccagagactggtgctggag
tgcctttgcaagctgagcattcaggacaacaacgtggacctgctgctggccacgccgccc
ttcagccgccaggagaagctgtatgctaccctggtgcgttatgtgggccagcgtaagaac
caggtgtaccgcgagatggccgtggccaccctatccaacctggctcaaggagactctacg
gcagcacgcgccatcgccatacagaagaatagtgtgggtaacctgatgggcttcctggag
gatggagtgagcatggcccagtaccagcagaacccccacagcattctgcacatggcccac
cacccccccatggagccccccagcattaacatgatgtgtcgggctgccaaagctctgctg
gctatggccaaggtggaggagaacaggccagagtttgtcctgtatgagggacgaatcctg
gacatctccatctcctctgtgctcaaccagggggtgaccagcatcatatgtgaagtactt
tttcagtttgtaaaaaaattgtga
DBGET
integrated database retrieval system
